University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



External capsule left


Abbreviation
ec
Color       
Superior regionsCapsules

SynonymsAbbr.Language
White matter ovelaying the striatum Eng
External capsuleecEng

SubregionsSide
Ventral most portion of the external capsuleleft

Output to

NameSideAbbr.WeightDetails
Substantia innominataipsiSI-2
Magnocellular preoptic nucleusipsiMCPO-2
Ventral pallidumipsiVP-2
Caudate putamenipsiCPu-0.5
Ventral striatumipsiCPuv-2
NeocortexipsiNEOCX-0.5
Temporoparietal cortexipsiTPcx-0.5

Input from

NameSideAbbr.WeightDetails
Dorsal raphe nucleus rostral partipsiDRr-2
Ventral posterior thalamic complex medial partipsiVPTm-0.5
Anterior basolateral nucleusipsiBLA-2
Posterior basolateral nucleusipsiBLP-2
Lateral amygdaloid nucleusipsiLA-2
Lateral nucleus caudal two-thirdsipsiLActt-2
Field CA1 of hippocampusipsiCA1-2
Presubiculum mid-septotemporal partipsiPrSmst-2
Entorhinal cortex layer 3ipsiEntL3-2
Retrosplenial agranular cortexipsiRSA-0.5
Cingulate cortex area 3 layer 5ipsiCg3L5-2
Agranular insular cortex posterior deep layersipsiAIPdL-2
Posteromedial barrel subfield C2ipsiPMBSFC2-2
Posteromedial barrel subfield D1ipsiPMBSFD1-2
Posteromedial barrel subfield D2ipsiPMBSFD2-2
Posteromedial barrel subfield D5ipsiPMBSFD5-2
Secondary somatosensory cortexipsiS20.5
Dorsal raphe nucleus rostral partcontraDRr-2
Motoric regionscontraM-10
Lateral agranular forepaw regioncontraAGlfp-0.5
Whiskers motor cortexcontraWMCx-0.5
Primary somatosensory cortexcontraS1-10

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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