University of Rostock

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Rat connectome



Central amygdaloid nucleus medial division rostral part left


Abbreviation
CeMR
Color       
Superior regionsCentral amygdaloid nucleus medial division

SynonymsAbbr.Language
Central amygdaloid nucleus medial division rostral partCeMR 
Central amygdaloid nucleus medial subdivision rostral part Eng

SubregionsSide
Central amygdaloid nucleus medial division rostral two thirdsleft

Output to

NameSideAbbr.WeightDetails
Central grayipsiCG-0.5
Central gray dorsal partipsiCGD-0.5
Central gray lateral ventral partipsiCGVD-0.5
Central gray ventral areaipsiCGva1.5
Dorsal terminal nucleus of the accessory optic tractipsiDT-0.5
Periventricular gray matteripsiPVG2
Superior colliculusipsiSC-0.5
Superior colliculus deep layersipsiSCd1
Substantia nigra A9ipsiSN0.5
Substantia nigra compact partipsiSNC0.5
Substantia nigra compact part rostromedialipsiSNCrm2
Substantia nigra lateral partipsiSNL3
Substantia nigra medial partipsiSNM2
Substantia nigra reticular partipsiSNR2
Ventral tegmental area A10ipsiVTA2
Ventral tegmental area A10 dorsolateral part dorsal periventricular partipsiVTAdLdv0.5
Ventral tegmental area A10 lateral partipsiVTAL2
Caudal linear nucleus of the rapheipsiCLi1.5
A5 noradrenaline cellsipsiA51
A7 noradrenaline cellsipsiA71
Locus coeruleusipsiLC2
Dorsal reticular formationipsiDRF-0.5
Pontine reticular nucleus caudal partipsiPNC-0.5
Parabrachial nucleusipsiPB-0.5
Lateral parabrachial nucleusipsiLPB4
Parabrachial nucleus dorsolateral partipsiPBDL-0.5
Parabrachial nucleus external divison lateral partipsiPBeDL-0.5
Parabrachial nucleus medialipsiPBnMe-0.5
Parabrachial nucleus rostral partipsiPBro-0.5
Parabrachial nucleus ventral part lateral portionipsiPBVL-0.5
Parabrachial nucleus waist partipsiPBW-0.5
Gigantocellular reticular nucleus alpha partipsiGiA1
Parvicellular reticular nucleus alpha partipsiPCRtA2
Subcoeruleus nucleusipsiSubC1
C2 adrenaline cellsipsiC22
C3 adrenaline cellsipsiC31
Area postremaipsiAP-0.5
Hypoglossal nucleusipsi12S-0.5
Mesencephalic trigeminal nucleusipsiMe52
Nucleus of the solitary tractipsiSol3
Nucleus of the solitary tract commissural partipsiSolC2
Nucleus of the solitary tract lateral partipsiSolL-0.5
Nucleus of the solitary tract medial partipsiSolM-0.5
Dorsal motor nucleus of vagusipsi103
Dorsal motor nucleus of vagus medial partipsi10M2
Dorsal raphe nucleusipsiDR2
Linear nucleus of the rapheipsiLIR1
Dorsal linear nucleus of the rapheipsiLIRD1
Raphe magnus nucleusipsiRMg1
Raphe pallidus nucleusipsiRPa1
Ventral lateral medulla oblongataipsiMVL-1
A2 noradrenergic cellsipsiA22
Cuneate nucleusipsiCu-0.5
A8 dopamine cells retrorubral groupipsiRRF2.5
Bed nucleus of the stria terminalisipsiBST1
Bed nucleus of the stria terminalis lateral divisionipsiBSTL1
Substantia nigra A9contraSN0.5
Dorsal reticular formationcontraDRF-0.5
C2 adrenaline cellscontraC21
Area postremacontraAP-0.5
Hypoglossal nucleuscontra12S-0.5
Nucleus of the solitary tractcontraSol-0.5
Nucleus of the solitary tract lateral partcontraSolL-0.5
Nucleus of the solitary tract medial partcontraSolM-0.5
Dorsal motor nucleus of vaguscontra10-0.5
Cuneate nucleuscontraCu-0.5
A8 dopamine cells retrorubral groupcontraRRF1

Input from

NameSideAbbr.WeightDetails
Peripeduncular nucleusipsiPP-0.5
Suprafascicular nucleus prepositus hypoglossi areaipsiPrSF-0.5
Suprafascicular nucleus prepositus hypoglossi area parvicellular partipsiPrSFpc-0.5
Retroethmoid nucleusipsiREth-0.5
Posterior intralaminar thalamic nucleusipsiPIL-0.5
Interstitial nucleus of the posterior limb of the anterior commissure lateral partipsiIPACL1
Infralimbic cortexipsiIL2
Gustatory dysgranular insular cortex layer 5ipsiDIgL51
Gustatory dysgranular insular cortex layer 6ipsiDIgL61
Dorsal peduncular cortexipsiDP2
Medial orbital cortexipsiMO2
Infralimbic cortexcontraIL0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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