University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Mediodorsal striatum left


Abbreviation
CPuMD
Color       
Superior regionsCaudate putamen

SynonymsAbbr.Language
Mediodorsal striatumCPuMDEng
Dorsomedial caudate putamen Eng

SubregionsSide
Mediodorsal striatum patchesleft
Mediodorsal striatum matrixleft

Output to

NameSideAbbr.WeightDetails
Substantia nigra reticular partipsiSNR-0.5
Globus pallidusipsiGP3

Input from

NameSideAbbr.WeightDetails
Substantia nigra medial partipsiSNM1.5
Substantia nigra reticular partipsiSNR2
Substantia nigra reticular part posterior halfipsiSNRph2
Substantia nigra reticular part upper halfipsiSNRuh2
Intralaminar nuclei of the dorsal thalamusipsiILM-0.5
Mediodorsal thalamic nucleusipsiMD-0.5
Midline group of the dorsal thalamusipsiMTN-0.5
Ventro anterior thalamic nucleusipsiVA-0.5
Ventrolateral thalamic nucleusipsiVL-0.5
Ventral medial nucleus of the thalamusipsiVMT-0.5
Amygdaloid complexipsiAC-0.5
Anterior basolateral nucleus medial partipsiBLAM3
Dorsal portion of the anterior basolateral nucleusipsiBLAD3
Posterior basolateral nucleusipsiBLP2
Ventral basolateral nucleusipsiBLV2
Basomedial amygdaloid nucleusipsiBM2
Lateral nucleus dorsal partipsiLAd2
Lateral nucleus ventral portionipsiLAVp2
Central amygdaloid nucleus intermediate divisionipsiCeI3
Nucleus of the lateral olfactory tract layer 3ipsiLOTL31
Amygdalohippocampal areaipsiAHi2
Anterior cingulate cortex layer 5ipsiACCL53
Anterior cingulate cortex layer 6ipsiACCL63
Ventral anterior cingulate cortexipsiVACC-0.5
Infralimbic cortexipsiIL-0.5
Orbitofrontal cortexipsiOrFCx3
Amygdaloid complexcontraAC-0.5
Anterior basolateral nucleus medial partcontraBLAM1
Central amygdaloid nucleus intermediate divisioncontraCeI0

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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