University of Rostock

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Rat connectome



Field CA1 of hippocampus temporal part left


Abbreviation
CA1t
Color       
Superior regionsField CA1 of hippocampus

SynonymsAbbr.Language
Field CA1 of hippocampus temporal partCA1tEng
Temporal extent of CA1 Eng
Temporal field CA1 Eng

SubregionsSide
Field CA1 of hippocampus temporal two thirdsleft
Intermediate third of the temporal extent of CA1left
Field CA1 of hippocampus temporal thirdleft
Most temporal region of CA1left
Field CA1 of hippocampus temporal poleleft
Field CA1 of hippocampus temporal part layersleft
Ventral part of the temporal CA1 field of the hippocampusleft

Output to

NameSideAbbr.WeightDetails
Basal nucleusipsiBnc2.5
Accessory basal nucleusipsiAB1.5
Basal nucleus intermediate divisionipsiBnci2.5
Basal nucleus parvicellular part medial partipsiBpcM2.5
Anterior basolateral nucleusipsiBLA2
Posterior basolateral nucleusipsiBLP1
Ventral basolateral nucleusipsiBLV1
Anterior basomedial nucleusipsiBMA1
Posterior basomedial nucleusipsiBMP2
Lateral amygdaloid nucleusipsiLA1.5
Bed nucleus of the stria terminalis intraamygdaloid divisionipsiBSTIA1
Central amygdaloid nucleusipsiCe1.5
Interstitial nucleus of the posterior limb of the anterior commissure medial partipsiIPACM2
Anterior amygdaloid areaipsiAA1
Anterior cortical amygdaloid nucleusipsiACo1
Posterior amygdaloid nucleusipsiCOAp1.5
Posterolateral cortical nucleusipsiPLCo1
Nucleus of the lateral olfactory tractipsiLOT1
Periamygdaloid complexipsiPAC1.5
Medial amygdaloid nucleusipsiMe1.5
Amygdalohippocampal areaipsiAHi1
Amygdalohippocampal area lateral partipsiAHilp2.5
Amygdalohippocampal area medial partipsiAHimp2.5
Posteromedial cortical nucleusipsiPMCo1
Amygdalostriatal transition area rostromedial partipsiAStrrm1
Intercalated nuclei of the amygdalaipsiI2.5
Accumbens nucleus posterior partipsiAcpo2
Accumbens nucleus rostral partipsiAcR-0.5
Medial accumbensipsiAcbM2
Molecular layer of the subiculumipsiSumo-0.5
Subiculum temporal partipsiSTe-0.5
Infralimbic cortexipsiIL-0.5
Infralimbic cortex dorsoventral extentipsiILdv-0.5
Perirhinal cortexipsiA35-0.5
Ectorhinal cortexipsiA36-0.5
Postrhinal cortexipsiPOR-0.5
Medial prefrontal cortexipsimPFC-0.5
Lateral septal nucleus ventral partipsiLSV3

Input from

NameSideAbbr.WeightDetails
Nucleus of the vertical limb of the diagonal band rostral partipsiVDBR-0.5
Medial septal nucleus lateral partipsiMSLa-0.5
Dorsal bank of rhinal fissureipsiDBrf1
Accessory basal nucleus magnocellular divisionipsiABm2
Accessory basal nucleus parvicellular divisionipsiABp2
Basal nucleus intermediate divisionipsiBnci1
Basal nucleus parvicellular part caudomedial regionipsiBpccm2
Basal nucleus parvicellular part lateral portionipsiBpcL1
Basomedial nucleus intermediate divisionipsiABi0.5
Basomedial nucleus parvicellular divisionipsiABpc1.5
Lateral nucleus medial partipsiLAM0.5
Ventrolateral part of the lateral nucleusipsiLaVL0.5
Central amygdaloid nucleusipsiCe0.5
Amygdalopiriform transition area posteromedial partipsiAPir_PM-1
Anterior amygdaloid areaipsiAA0.5
Anterior cortical amygdaloid nucleusipsiACo0.5
Posterior amygdaloid nucleusipsiCOAp3
Nucleus of the lateral olfactory tractipsiLOT0.5
Periamygdaloid complexipsiPAC0.5
Periamygdaloid complex medial divisionipsiPACm1
Periamygdaloid complex sulcal divisionipsiPACs1
Medial amygdaloid nucleus caudal partipsiMeC0.5
Medial amygdaloid nucleus central ventral partipsiMeCV0.5
Amygdalohippocampal area lateral partipsiAHilp2
Amygdalohippocampal area medial partipsiAHimp0.5
Bed nucleus of the accessory olfactory tractipsiBAOT0.5
Intercalated nuclei of the amygdalaipsiI0.5
Dentate gyrus temporal partipsiDGT-0.5
Field CA3 of hippocampus temporal partipsiCA3T-0.5
Intermediate septotemporal CA3 regionipsiCA3int-0.5
Lateral entorhinal cortexipsiLEnt-0.5
Lateral entorhinal cortex ventromedial partipsiVMEAL-0.5
Lateral entorhinal cortex dorsolateral partipsiLEntDLa-0.5
Lateral entorhinal cortex intermediate septotemporal partipsiLEntimt-0.5
Lateral entorhinal cortex distal partipsiLEntdi-0.5
Medial entorhinal cortex distal portionipsiMEntDi-0.5
Medial entorhinal cortex dorsolateral partipsiMEntdL-0.5
Medial entorhinal cortex intemediate dorsolateral-ventromedial partipsiMEntimt-0.5
Medial entorhinal cortex ventromedial partipsiMEntvm-0.5
Perirhinal cortexipsiA35-0.5
Ectorhinal cortexipsiA36-0.5
Postrhinal cortexipsiPOR-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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