University of Rostock

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Rat connectome



Septal part of the field CA3 of hippocampus left


Abbreviation
SCA3
Color       
Superior regionsField CA3 of hippocampus

SynonymsAbbr.Language
Septal part of the field CA3 of hippocampusSCA3Eng

SubregionsSide
Pyramidal cells of the septal part of the field CA3 of hippocampusleft
Septal half of the field CA3 of hippocampusleft

Output to

NameSideAbbr.WeightDetails
Nucleus of the horizontal limb of the diagonal band medial partipsiHDBm1
Nucleus of the vertical limb of the diagonal bandipsiVDB3
Nucleus of the vertical limb of the diagonal band angular part cholinergic cell-poor central coreipsiVDBAccpsc3
Nucleus of the vertical limb of the diagonal band medial partipsiVDBme-0.5
Nucleus of the vertical limb of the diagonal band rostrocaudal extent CHAT magnocellular neuronsipsiVDBrcecm-0.5
Medial septal nucleusipsiMS3
Medial septal nucleus medial partipsiMSm-0.5
Proximal field CA1 of hippocampusipsiPCA1-0.5
Field CA1 of hippocampus septal partipsiCA1sep-0.5
Intermediate septotemporal CA1 regionipsiCA1int-0.5
Field CA3 of hippocampus temporal partipsiCA3T-0.5
Intermediate septotemporal CA3 regionipsiCA3int-0.5
Subiculum dorsal partipsiSd-0.5
Subiculum septal partipsiSse-0.5
Intermediate septotemporal part of the subiculumipsiSubint-0.5
Septal presubiculumipsiSPrS-0.5
Parasubiculum layer 1ipsiPaSL1-0.5
Parasubiculum layer 2ipsiPaSL2-0.5
Entorhinal cortex layer 4ipsiEntL4-0.5
Perirhinal cortexipsiA35-0.5
Ectorhinal cortexipsiA36-0.5
Postrhinal cortexipsiPOR-0.5
Septal regionipsiSER-0.5
Dorsal medial septumipsiDMS-0.5
Lateral septal nucleus dorsal partipsiLSD-0.5
Nucleus of the horizontal limb of the diagonal band medial partcontraHDBm1
Nucleus of the vertical limb of the diagonal bandcontraVDB1.5
Nucleus of the vertical limb of the diagonal band angular part cholinergic cell-poor central corecontraVDBAccpsc3
Nucleus of the vertical limb of the diagonal band medial partcontraVDBme-0.5
Nucleus of the vertical limb of the diagonal band rostrocaudal extent CHAT magnocellular neuronscontraVDBrcecm-0.5
Medial septal nucleuscontraMS1.5
Medial septal nucleus medial partcontraMSm-0.5
Dorsal medial septumcontraDMS-0.5
Lateral septal nucleus dorsal partcontraLSD-0.5

Input from

NameSideAbbr.WeightDetails
Nucleus of the vertical limb of the diagonal bandipsiVDB-0.5
Medial septal nucleus medial partipsiMSm-0.5
Dentate gyrus septal partipsiDGs-0.5
Intermediate septotemporal part of the dentate gyrusipsiDGint-0.5
Field CA1 of hippocampus septal partipsiCA1sep-0.5
Intermediate septotemporal CA1 regionipsiCA1int-0.5
Intermediate septotemporal CA3 regionipsiCA3int-0.5
Lateral entorhinal cortex ventromedial partipsiVMEAL-0.5
Lateral entorhinal cortex dorsolateral partipsiLEntDLa-0.5
Lateral entorhinal cortex intermediate septotemporal partipsiLEntimt-0.5
Medial entorhinal cortex dorsolateral partipsiMEntdL-0.5
Medial entorhinal cortex intemediate dorsolateral-ventromedial partipsiMEntimt-0.5
Medial entorhinal cortex ventromedial partipsiMEntvm-0.5
Retrosplenial agranular cortexipsiRSA-0.5
Retrosplenial granular cortex b regionipsiRSGb0
Middle part of area 29c layer 5ipsiRSGcmiL51
Middle part of area 29c layer 6ipsiRSGcmiL6-0.5
Ectorhinal cortexipsiA36-0.5
Postrhinal cortexipsiPOR-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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