University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Intermediolateral cell column L5 left


Abbreviation
IMLL5
Color       
Superior regionsLumbar segment 5

SynonymsAbbr.Language
Intermediolateral cell column L5IMLL5Eng

SubregionsSide
Intermediolateral cell column pars funicularis L5left
Intermediolateral cell column pars principalis L5left
Intermediolateral cell column pars spinalis L5left
Sympathetic preganglionic cell column L5left

Output to

NameSideAbbr.WeightDetails
Barringtons nucleusipsiBar2
Reticulotegmental nucleusipsiRETn-0.5
Ventromedial reticular formationipsiVMRF1
Pontine reticular nucleus oral partipsiPnO-0.5
Pontine reticular nucleus caudal partipsiPNC-0.5
Parabrachial nucleusipsiPB1
Koelliker Fuse nucleusipsiKF-0.5
Nucleus of the solitary tractipsiSol1
Lumbar segment 1ipsiL1-1
Barringtons nucleuscontraBar1
Ventromedial reticular formationcontraVMRF3
Pelvic ganglionipsiAutoPeG-2
ColonipsiOrgsColonS0.5
Distal colonipsiOrgsColonDi-0.5
Distal coloncontraOrgsColonDi-0.5
Ischiocavernosus muscleipsiMuscicav-10
PenisipsiOrgPenis2
Corpus cavernosumipsiOrgCC3
Corpus spongiosumipsiOrgSPG1
Ventral prostate glandipsiOrgProstV3
Seminal vesicleipsiOrgRepSV-10
Corpus cavernosumcontraOrgCC-0.5
Seminal vesiclecontraOrgRepSV-10

Input from

NameSideAbbr.WeightDetails
Central gray pons dorsolateral partipsiCGPdl3
A5 noradrenaline cellsipsiA51
A7 noradrenaline cellsipsiA7-0.5
Locus coeruleusipsiLC2
Parapyramidal nucleusipsiPPy-0.5
Reticulotegmental nucleusipsiRETn-0.5
Magnocellular reticular nucleus alpha partipsiNRMCa-0.5
Pontine reticular nucleus oral partipsiPnO-0.5
Pontine reticular nucleus caudal partipsiPNC-0.5
Parabrachial nucleusipsiPB-0.5
Koelliker Fuse nucleusipsiKF-0.5
Parabrachial nucleus dorsal partipsiPBD-0.5
Gigantocellular reticular nucleusipsiGi2
Gigantocellular reticular nucleus alpha partipsiGiA1
Gigantocellular reticular nucleus ventral partipsiGiV1
Medial subnucleus reticularis ventralisipsiMSRV1
Medulla oblongataipsiMeOb-0.5
Ambiguus nucleusipsiAmb-0.5
Nucleus of the solitary tractipsiSol-0.5
Raphe magnus nucleusipsiRMg2
Raphe obscurus nucleusipsiROb2
Raphe obscurus nucleus caudal partipsiRObc-0.5
Raphe pallidus nucleusipsiRPa2
Nucleus interfascicularis hypoglossiipsiNIFH-0.5
Paragigantocellular reticular nucleusipsiPGi-0.5
Lateral paragigantocellular nucleusipsiLPGi2
Lateral hypothalamic areaipsiLH1
Lateral hypothalamic area posterior partipsiLHAp0.5
Tuberal division of the lateral hypothalamic areaipsiLHTC0.5
Paraventricular hypothalamic nucleus dorsal partipsiPaD-0.5
Paraventricular hypothalamic nucleus magnocellular divisionipsiPaMag0
Paraventricular hypothalamic nucleus parvocellular divisionipsiPavPo1
A11 dopamine cellsipsiA111
Basal retrochiasmatic areaipsiBRCh1
Parafascicular thalamic nucleus prerubral partipsiPFPR1
A5 noradrenaline cellscontraA50.5
Locus coeruleuscontraLC0.5
Gigantocellular reticular nucleuscontraGi0.5
Gigantocellular reticular nucleus alpha partcontraGiA0.5
Gigantocellular reticular nucleus ventral partcontraGiV0.5
Medial subnucleus reticularis ventraliscontraMSRV1
Medulla oblongatacontraMeOb-0.5
Nucleus of the solitary tractcontraSol-0.5
Nucleus interfascicularis hypoglossicontraNIFH-0.5
Lateral paragigantocellular nucleuscontraLPGi3
Lateral hypothalamic areacontraLH0.5
A11 dopamine cellscontraA110.5
Parafascicular thalamic nucleus prerubral partcontraPFPR0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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