University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Spinal cord layer 5 Co1 left


Abbreviation
SCL5Co1
Color       
Superior regionsDeep dorsal horn Co1

SynonymsAbbr.Language
Spinal cord layer 5 Co1SCL5Co1Eng

Output to

NameSideAbbr.WeightDetails
Posterior lobe of the cerebellumipsiCERCPL1
Ansiform lobule crus 1ipsiCrus11
Simple lobuleipsiSim1
Anterior lobeipsiAnL2
Paravermal region of anterior lobeipsiPVAnL1
Parabrachial nucleusipsiPB-0.5
Lateral parabrachial nucleus lateral partipsiLPBL1
Parabrachial nucleus central lateral partipsiPBCeL0
Parabrachial nucleus dorsolateral partipsiPBDL0
Parabrachial nucleus superior lateralipsiPBSL0
Nucleus of the solitary tract caudal partipsiSolca-0.5
Dorsal regionipsiDHR-0.5
Lateral hypothalamic areaipsiLH-0.5
Posterior hypothalamic areaipsiPHA-0.5
TelencephalonipsiTEL-0.5
Amygdaloid complexipsiAC-0.5
Basal gangliaipsiBG-0.5
Infralimbic cortexipsiIL-0.5
Medial orbital cortexipsiMO-0.5
Lateral cervical nucleus C1ipsiLatCC1-0.5
Lateral cervical nucleus C2ipsiLatCC2-0.5
Lateral cervical nucleus C3ipsiLatCC3-0.5
Lateral cervical nucleus C4ipsiLatCC4-0.5
Intercollicular nucleuscontraInCo-0.5
Superior colliculus intermediate layerscontraSCi-0.5
Superior colliculus deep layerscontraSCd-0.5
CerebellumcontraCERE-0.5
Ansiform lobule crus 1contraCrus11
Simple lobulecontraSim1
Anterior lobecontraAnL1
Paravermal region of anterior lobecontraPVAnL1
Lateral parabrachial nucleus lateral partcontraLPBL1
Parabrachial nucleus central lateral partcontraPBCeL0
Parabrachial nucleus dorsolateral partcontraPBDL0
Parabrachial nucleus superior lateralcontraPBSL0
Lateral paragigantocellular nucleuscontraLPGi-0.5
Paragigantocellular reticular nucleus medial partcontraPGiM-0.5
Pretectal regioncontraPRT-0.5
Lateral funiculuscontralf-2

Input from

NameSideAbbr.WeightDetails
Caudal part of ventral locus coeruleusipsiLCveca0.5
Gigantocellular reticular nucleusipsiGi-0.5
Lateral hypothalamic areaipsiLH0.5
Zona incerta rostromedial partipsiZIrm0
Caudal part of ventral locus coeruleuscontraLCveca0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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