University of Rostock

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Rat connectome



Islands of Calleja right


Abbreviation
ICj
Color       
Superior regionsBasal forebrain

SynonymsAbbr.Language
Major islands of Calleja  
Islands of CallejaICjEng

SubregionsSide
Islands of Calleja central coreright
Islands of Calleja lateral partright
Islands of Calleja major islandright
Islands of Calleja medial partright
Islands of Calleja posterior partright

Output to

NameSideAbbr.WeightDetails
Substantia nigra compact partipsiSNC2
Gemini hypothalamic nucleusipsiGem0
Lateral hypothalamic areaipsiLH-1
Mediodorsal thalamic nucleusipsiMD2
Mediodorsal thalamic nucleus central partipsiMDC1
Mediodorsal thalamic nucleus medial partipsiMDM1
Central amygdaloid nucleusipsiCe1
Anterior amygdaloid areaipsiAA1
Accumbens nucleusipsiAc1
Piriform cortexipsiPir1
Septal regionipsiSER1

Input from

NameSideAbbr.WeightDetails
Medial group of the dorsal thalamuscontraMED1
Mediodorsal thalamic nucleuscontraMD1
Nucleus of the lateral olfactory tractcontraLOT-0.5
Nucleus of the lateral olfactory tract layer 2contraLOTL23
Dorsal raphe nucleusipsiDR3
Dorsal raphe nucleus caudal part non serotoninergic populationipsiDRCnsp0.5
Dorsal raphe nucleus dorsal part non serotoninergic populationipsiDRDnsp0.5
Dorsal raphe nucleus interfascicular part non serotoninergic populationipsiDRInsp0.5
Dorsal raphe nucleus lateral wing non serotoninergic populationipsiDRIwnsp0.5
Dorsal raphe nucleus midrostrocaudal part non serotoninergic populationipsiDRmrcnsp0.5
Dorsal raphe nucleus rostral part non serotoninergic populationipsiDRrnsp0.5
Dorsal raphe nucleus ventral part non serotoninergic populationipsiDRVnsp0.5
Dorsal raphe nucleus ventrolateral part non serotoninergic populationipsiDRVLnsp0.5
Median raphe nucleusipsiMnR-0.5
Lateral hypothalamic areaipsiLH1
Lateral hypothalamic area perifornical partipsiPFx1
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM1
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM1
Medial group of the dorsal thalamusipsiMED2
Mediodorsal thalamic nucleusipsiMD2
Basolateral amygdaloid nucleusipsiBL0
Basomedial amygdaloid nucleusipsiBM-0.5
Central amygdaloid nucleusipsiCe1
Anterior cortical amygdaloid nucleusipsiACo-0.5
Posterolateral cortical nucleusipsiPLCo2
Nucleus of the lateral olfactory tractipsiLOT3
Nucleus of the lateral olfactory tract layer 2ipsiLOTL23
Periamygdaloid complexipsiPAC-0.5
Amygdalohippocampal areaipsiAHi-0.5
Lateral entorhinal cortexipsiLEnt2.5
Posterior piriform cortexipsiPPIRC0
Ventrolateral orbital areaipsiVLO0
Septal regionipsiSER1

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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