University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Pyramidal cell layer of the hippocampus right


Abbreviation
Py
Color       
Superior regionsHippocampal cortex

SynonymsAbbr.Language
Pyramidal cell layer of the hippocampusPyEng
Stratum pyramidale of the hippocampus Eng

Output to

NameSideAbbr.WeightDetails
Mammillary bodycontraCMAM0
Cerebellar lobule 9ipsiCERL9-0.5
Cerebellar lobule 10ipsiCERL10-0.5
Mammillary bodyipsiCMAM0
Bed nucleus of the stria terminalisipsiBST2
StriatumipsiSTR-0.5
Accumbens nucleus coreipsiAcbC2
Lateral accumbens shellipsiAcbShl2
Medial accumbens shellipsiAcbShm2
Anterodorsal hippocampusipsiHIPPAD3
Field CA1 of hippocampus dorsal layer stratum oriensipsiCA1dL2so1
Field CA1 of hippocampus dorsal layer stratum pyramidaleipsiCA1dL3sp1
Ventrolateral hippocampusipsiVlHIPP-0.5

Input from

NameSideAbbr.WeightDetails
Mammillary bodycontraCMAM0
Raphe nucleiipsiRAN-2
Medial septal nucleusipsiMS2
Mammillary bodyipsiCMAM0
Dentate gyrus midtemporal levelipsiDGmt-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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