University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Perifornical nucleus medial part left


Abbreviation
PeFM
Color       
Superior regionsPerifornical nucleus

SynonymsAbbr.Language
Perifornical nucleus medial partPeFMEng

Output to

NameSideAbbr.WeightDetails
Periaqueductal grayipsiPAG-2
Dorsolateral periaqueductal gray caudal partipsiPAGdlc3
Rostralmost part of periaqueductal grayipsiPAGromo1
Mesencephalic reticular formationipsiMRF-2
Preoptic regionipsiPREO-2
Lateral preoptic areaipsiLPO1
Medial preoptic areaipsiMPA0.5
Lateral hypothalamic area ventral partipsiLHAvp-2
Anterior hypothalamic area central partipsiAHAC3
Anterior hypothalamic area posterior partipsiAHAP3
Anterior part of the anterior hypothalamic nucleusipsiAHna0
Posterior hypothalamic nucleusipsiPH-2
Ventromedial hypothalamic nucleus central partipsiVMHC3
Ventromedial hypothalamic nucleus dorsomedial partipsiVMHDM3
Supraoptic decussationipsisox-2
Premammillary nucleus dorsal partipsiPMD3
Supramammillar nucleus medial partipsiSuMM-0.5
Perifornical nucleus anterior partipsiPeFa0.5
Paratenial thalamic nucleusipsiPT-2
Paraventricular thalamic nucleusipsiPV-2
Reuniens thalamic nucleus anteroventral partipsiReav3
Zona incerta medial partipsiZIm1
Lateral habenular nucleusipsiLHb1
Stria medullaris of the thalamusipsism-2
Posterior basomedial nucleusipsiBMP3
Lateral nucleus ventral portionipsiLAVp3
Bed nucleus of the stria terminalis interfascicular nucleusipsiBSTif1
Bed nucleus of the stria terminalis transverse nucleusipsiBSTt1
Central amygdaloid nucleus lateral division capsular partipsiCeC-1
Medial amygdaloid nucleusipsiMe-1
Accumbens nucleus shellipsiAcbSh-0.5
Dorsomedial shellipsiAcbShdm-0.5
Lateral septal nucleus intermediate partipsiLSI3
Stria terminalisipsist-2
Thoracal segment 1ipsiT1-0.5
Thoracal segment 2ipsiT2-0.5
Thoracal segment 3ipsiT3-0.5
Thoracal segment 4ipsiT4-0.5
Thoracal segment 5ipsiT5-0.5
Thoracal segment 6ipsiT6-0.5
Thoracal segment 7ipsiT7-0.5
Thoracal segment 8ipsiT8-0.5
Thoracal segment 9ipsiT9-0.5
Thoracal segment 10ipsiT10-0.5
Thoracal segment 11ipsiT11-0.5
Thoracal segment 12ipsiT12-0.5
Thoracal segment 13ipsiT13-0.5
Accumbens nucleus shellcontraAcbSh-0.5
Dorsomedial shellcontraAcbShdm-0.5

Input from

NameSideAbbr.WeightDetails
Anterior hypothalamic nucleusipsiAHn-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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