University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Posteromedial thalamic nucleus left


Abbreviation
PMTN
Color       
Superior regionsPosterior group

SynonymsAbbr.Language
Posterior group pars medialisPomEng
Posteromedial thalamic nucleusPMTNEng

Output to

NameSideAbbr.WeightDetails
Caudal forelimb motor areaipsiCFMA3
Medial prefrontal cortexipsimPFC1
Caudal whisker areaipsiCS1BF1.5

Input from

NameSideAbbr.WeightDetails
Ventral periaqueductal grayipsiVPAG1.5
Periventricular gray matteripsiPVG1
Dorsal tegmental nucleusipsiDTg1
Locus coeruleus dorsal partipsiLCD3
Parabrachial nucleus medialipsiPBnMe1
Parabrachial nucleus ventrolateral partipsiPBveLa3
Gigantocellular reticular nucleusipsiGi1
Lateral reticular nucleusipsiLRt-0.5
Paratrigeminal nucleusipsiPa53
Principal sensory trigeminal nucleusipsiPr52
Spinal trigeminal nucleus caudal partipsiSp5C0.5
Spinal trigeminal nucleus interpolar partipsiSp5I1.5
Spinal trigeminal nucleus oral partipsiSp5O0.5
Dorsal raphe nucleusipsiDR1
Median raphe nucleusipsiMnR1
Pontine raphe nucleusipsiPnR0
Raphe magnus nucleusipsiRMg0
Cuneate nucleusipsiCu1.5
GracileipsiGra1.5
Nucleus of BischoffipsiNBi0.5
Lateral reticular nucleuscontraLRt-0.5
Principal sensory trigeminal nucleuscontraPr54
Spinal trigeminal nucleus caudal partcontraSp5C0.5
Spinal trigeminal nucleus interpolar partcontraSp5I3
Spinal trigeminal nucleus oral partcontraSp5O1
Cuneate nucleuscontraCu3
GracilecontraGra3
Nucleus of BischoffcontraNBi0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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