University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Optic nerve left


Abbreviation
2n
Color       
Superior regionsVisual system

SynonymsAbbr.Language
Nervus opticus  
Optical nerve Eng
Optic nerve2nEng

Output to

NameSideAbbr.WeightDetails
Superior colliculus superficial layersipsiSCs-0.5
Olivary nucleusipsiON-0.5
Suprachiasmatic nucleusipsiSCh-0.5
Optic chiasmipsiox-0.5
Posterior pretectal nucleusipsiPPT-0.5
Retinal ganglion cellsipsiRETg3
Nucleus of the accessory optic tractipsiNAOS-0.5
Lateral geniculate complexipsiLG-0.5
EyecontraOrgEye-0.5

Input from

NameSideAbbr.WeightDetails
Oculomotor nucleusipsi30.5
Paraventricular hypothalamic nucleusipsiPa-2
Supraoptic regionipsiSoR-2
Ventral hypothalamic regionipsiVHR0
Pretectal regionipsiPRT0.5
Medial pretectal nucleusipsiMPT0.5
RetinaipsiRET-0.5
Retinal ganglion cellsipsiRETg-0.5
Dentate gyrusipsiDG-2
Field CA3 of hippocampusipsiCA3-2
Intergeniculate leafipsiIGL-2
Central gray lateral ventral partcontraCGVD-0.5
Oculomotor nucleuscontra30.5
Trochlear nucleuscontra40.5
Pretectal regioncontraPRT-0.5
Medial pretectal nucleuscontraMPT-0.5
RetinacontraRET-0.5
Retinal ganglion cellscontraRETg-2
Dentate gyruscontraDG-2
Field CA3 of hippocampuscontraCA3-2
Intergeniculate leafcontraIGL-0.5
Posterior chamber of the eyecontraOrgPCEye-2

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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