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Rat connectome



Suprachiasmatic nucleus left


Abbreviation
SCh
Color       
Superior regionsPeriventricular zone

SynonymsAbbr.Language
Nucleus ovoideusSCN 
Suprachiasmatic nucleus 2SCh2Eng
Nucleus suprachiasmaticusSCHLat
Suprachiasmatic nucleusSCHEng
Suprachiasmatic nucleusSChNEng
Suprachiasmatic nucleusSCNEng
Suprachiasmatic area Eng
Hypothalamic suprachiasmatic nucleus Eng
Suprachiasmatic nucleusSChEng

SubregionsSide
Suprachiasmatic nucleus anterior partleft
Suprachiasmatic nucleus caudal partleft
Suprachiasmatic nucleus central divisionleft
Suprachiasmatic nucleus dorsal divisionleft
Suprachiasmatic nucleus dorsolateral partleft
Suprachiasmatic nucleus dorsomedial partleft
Suprachiasmatic nucleus external divisionleft
Suprachiasmatic nucleus lateral divisionleft
Suprachiasmatic nucleus medial divisionleft
Suprachiasmatic nucleus perinuclear zoneleft
Suprachiasmatic nucleus ventral divisionleft
Suprachiasmatic nucleus ventrolateral partleft
Suprachiasmatic nucleus ventromedial dorsolateral partleft
Suprachiasmatic nucleus ventromedial partleft
Cells surrounding suprachiasmatic nucleusleft
Region dorsal to suprachiasmatic nucleusleft
Region lateral to the suprachiasmatic nucleusleft
Ventrally intermediate part of the suprachiasmatic nucleusleft
Suprachiasmatic nucleus rostral partleft
Suprachiasmatic nucleus surrounding the central suprachiasmatic nucleus regionleft
Thin zone between suprachiasmatic nucleus and ependymal layer of 3Vleft
Suprachiasmatic nucleus medioventral partleft
Plexus that surrounds the suprachiasmatic nucleusleft
Area surrounding the suprachiasmatic nucleusleft
Suprachiasmatic nucleus shell regionleft
Suprachiasmatic nucleus core regionleft
Suprachiasmatic nucleus neuronleft
Mid suprachiasmatic nucleusleft
Suprachiasmatic nucleus posterior partleft

Output to

NameSideAbbr.WeightDetails
Central gray mesencephalic partipsiCGM-2
Central gray mesencephalic part inferior colliculus levelipsiCGMinf1
Central gray mesencephalic part superior colliculus levelipsiCGMsc2
Medial mesencephalic central grayipsiCGMM1
Parabigeminal nucleusipsiPBG-0.5
Periaqueductal grayipsiPAG0
Periaqueductal gray area between most caudal and most rostral partipsiPAGcbr0
Periaqueductal gray caudal partipsiPAGc-0.5
Periaqueductal gray most caudal partipsiPAGmoc0
Periaqueductal gray rostral partipsiPAGR-0.5
Periaqueductal gray rostral most partipsiPAGRmo1
Red nucleusipsiR1
Ventral tegmental area A10ipsiVTA0
A5 noradrenaline cellsipsiA50
Vestibular nucleiipsiVnc-3
Nucleus of the solitary tract caudal partipsiSolca-0.5
Raphe nucleiipsiRAN0
Dorsal raphe nucleusipsiDR-0.5
Inferior salivatory nucleusipsiIS0
Superior salivatory nucleusipsiSuS0
Medial eminence internal layeripsiMEI-0.5
Median eminenceipsiME2
Internal zone of the median eminenceipsiiZME0
Median eminence external layeripsiMEeL-2
Median eminence middle portion subependymal layeripsiMEmise1
Diagonal band of BrocaipsiDBB2
Nucleus of the diagonal band of Broca ventral partipsiVDBV1
Nucleus of the vertical limb of the diagonal bandipsiVDB3
Medial septal nucleusipsiMS1
Ventral aspect of the medial septal nucleusipsiMSVa-0.5
Preoptic regionipsiPREO3
Lateral preoptic areaipsiLPO1
Medial preoptic areaipsiMPA3
Medial preoptic area caudal partipsiMPAC-2
Medial preoptic area rostral partipsiMPAR-2
Medial preoptic area ventral partipsiMPAV0.5
Medial preoptic nucleusipsiMPO1
Medial preoptic nucleus lateral partipsiMPOL-2
Medial preoptic nucleus caudal poleipsiMPOcp-2
Median preoptic nucleusipsiMnPO0.5
Ventrolateral preoptic nucleusipsiVLPO1
Preoptic region rostral partipsiPREOr3
Strial part of the preoptic areaipsiStA-2
Periventricular area of the preoptic regionipsiPVPREO-2
Dorsal tuberomammillary nucleusipsiDTM3
Vascular organ of the lamina terminalisipsiVOLT3
Anteroventral hypothalamic nucleusipsiAVHY-0.5
Dorsomedial hypothalamic nucleusipsiDMHy3
Dorsomedial hypothalamic nucleus non-compact partipsiDMHyncp2
Margin of the dorsomedial hypothalamic nucleusipsiDMHyM-0.5
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC0
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR0.5
Lateral zoneipsiLHA1
Lateral hypothalamic areaipsiLH1.5
Lateral hypothalamic area juxtadorsomedial regionipsiJDM0
Lateral hypothalamic area motor related juxtaventromedial region dorsal zoneipsiLHAjvd0.5
Lateral hypothalamic area motor related juxtaventromedial region ventral zoneipsiLHAjvv0
Lateral hypothalamic area perifornical partipsiPFx1.5
Lateral hypothalamic area ventral partipsiLHAvp-2
Tuberal region of lateral hypothalamusipsiTuLH0
Lateral hypothalamic area [Lateral zone tuberal level]ipsiLHtu0.5
Mediobasal hypothalamusipsiMeHypo1
Medial division of the hypothalamusipsiMdH2
Anterior hypothalamic areaipsiAHA3
Anterior hypothalamic area caudal partipsiAHAca-0.5
Anterior hypothalamic area dorsal partipsiAHAd-0.5
Anterior hypothalamic area posterior partipsiAHAP0
Anterior hypothalamic area rostral partipsiAHAr3
Anterior hypothalamic area ventral partipsiAHAve-2
Anteroventral periventricular nucleus [Anterior hypothalamic area]ipsiAVPe2
Dorsal periventricular nucleus [Anterior hypothalamic area]ipsiDPe-0.5
Anterior hypothalamic nucleusipsiAHn-0.5
Anterior hypothalamic nucleus rostral zoneipsiAHnR3
Anteroventral preoptic nucleusipsiAnV1
Area lateralis hypothalamicus posterior [Regio hypothalamus caudalis]ipsiDMrhc-0.5
Dorsal hypothalamic areaipsiDA3
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM3
Dorsomedial hypothalamic nucleus diffuse partipsiDMH-0.5
Dorsomedial hypothalamic nucleus dorsal partipsiDMD2.5
Dorsomedial hypothalamic nucleus medial partipsiDMmp-1
Dorsomedial nucleus posterior partipsiDMHp-2
Posterior hypothalamic areaipsiPHA3
Subparaventricular zoneipsiSuPZ3
Subparaventricular zone ventral partipsiSuPZv-3
Subparaventricular zone at ventral border of paraventricular hypothalamic nucleusipsiSuPZvbPa3
Extension of the subparaventricular zoneipsieSuPZ-0.5
Subparaventricular area medial aspectipsiSuPZma-0.5
Subparaventricular lateral aspectipsiSuPZLa-0.5
Tuberal areaipsiTA2
Tuberal area ventral to the fornixipsiTAvf0
Caudal between arcuate nucleus and the ventromedial hypothalamic nucleus medial partipsiCArcVMHA-2
Cell-sparse zone between Pe and AHAipsicsMHA3
Between ventral border of Pa and dorsal border of AHAipsibvbMHA3
Cell-sparse zone dorsal and medial to VMH ipsicszMHA2
Ventromedial hypothalamic nucleusipsiVMH3
Ventromedial hypothalamic nucleus central partipsiVMHC1
Ventromedial hypothalamic nucleus dorsal partipsiVMHd-2
Ventromedial hypothalamic nucleus lateral partipsiVMHL-2
Ventromedial hypothalamic nucleus lateral marginipsiVMHLm-2
Ventromedial hypothalamic nucleus medial partipsiVMHM-2
Ventromedial hypothalamic nucleus rostral partipsiVMHR-2
Ventromedial hypothalamic nucleus ventral partipsiVMHV-2
Ventromedial hypothalamic nucleus ventrolateral partipsiVMHVL1
Ventromedial hypothalamic nucleus surrounding areaipsiVMHSur-0.5
Ventromedial hypothalamic nucleus cell sparse zone surrounding areaipsiVMHSurcs1
Mediobasal hypothalamus anterior partipsiMeHypoAnt0.5
Mediobasal hypothalamus posterior partipsiMeHypoP0.5
Periventricular zoneipsiPVZ-0.5
Anterior periventricular nucleusipsiPeA1
Arcuate nucleusipsiArc2
Arcuate nucleus lateral partipsiArcL3
Arcuate nucleus middle partipsiArcMi-0.5
Arcuate nucleus ventromedial partipsiArcVM2
Area around the arcuate nucleusipsiArcaa-0.5
Alpha MSH-neurons of the arcuate nucleusipsiArcMSH3
Area periventricularis hypothalamica communis [Regio hypothalamus medius]ipsiPeRHM-0.5
Dorsomedial hypothalamic nucleus [Periventricular zone]ipsiDMpz3
Nucleus paraventricularis [Periventricular zone anterior region]ipsiPaPAR3
Paraventricular hypothalamic nucleus dorsal cap [Periventricular zone anterior region]ipsiPaDC3
Paraventricular nucleus of the hypothalamus magnocellular division anterior magnocellular partipsiPaAMa-1
Paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region]ipsiPaMP2
Ventrolateral border of the paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region]ipsiPaMPvLb-2
Paraventricular hypothalamic nucleus parvicellular division dorsal partipsiPaPcD-0.5
Paraventricular hypothalamic nucleus medial parvocellular partipsiMPPa2
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsiPaAP1
Paraventricular hypothalamic nucleus dorsal partipsiPaD3
Paraventricular hypothalamic nucleus posterior part [Periventricular zone anterior region]ipsiPaPo0
Nucleus paraventricularis rostral partipsiPaPARr-0.5
Outside the boundaries of the suprachiasmatic nucleusipsiOBSCh0
Perichiasmatic regionipsiPeCC3
Paraventricular hypothalamic nucleusipsiPa3
Lateral to the paraventricular hypothalamic nucleus magnocellular division posterior partipsiLaTPa-0.5
Mid paraventricular hypothalamic nucleusipsiMiPa-0.5
Paraventricular hypothalamic nucleus magnocellular divisionipsiPaMag0.5
Paraventricular hypothalamic nucleus magnocellular division posterior partipsiPaMagP1
Paraventricular hypothalamic nucleus magnocellular division posterior part lateral zoneipsiPVHpml0
Paraventricular hypothalamic nucleus magnocellular division posterior part medial zoneipsiPVHpmm0
Paraventricular hypothalamic nucleus magnocellular division medial partipsiPaMagM0
Paraventricular hypothalamic nucleus anterior magnocellular divisionipsiPaMagA0
Paraventricular hypothalamic nucleus parvocellular divisionipsiPavPo1
Paraventricular hypothalamic nucleus dorsal parvocellular divisionipsiPavPoD2
Paraventricular hypothalamic nucleus parvocellular division lateroposterior subnucleiipsiPavPoLP0
Paraventricular nucleus lateral parvocellular partipsiPaLp-0.5
Paraventricular nucleus medial parvocellular partipsiPaMep0
Paraventricular nucleus medial parvicellular part dorsal zoneipsiPVHmpdo1
Paraventricular nucleus medial parvocellular part ventral zoneipsiPaMepv1
Paraventricular hypothalamic nucleus periventricular partipsiPapv2
Parvocellular part of the paraventricular hypothalamic nucleus periventricular partipsiPVPapv-2
Paraventricular hypothalamic nucleus rostral partipsiPaRo3
Paraventricular hypothalamic nucleus ventral borderipsiPaVb-0.5
Paraventricular nucleus anterior partipsiPaan0.5
Paraventricular nucleus dorsal edgeipsiPaDoE0
Paraventricular nucleus dorsal most portionipsiPaDom0.5
Paraventricular nucleus medial partipsiPame2
Paraventricular nucleus medial part at mid paraventricular hypothalamic nucleus levelipsiPamemi0.5
Paraventricular nucleus medial part at posterior paraventricular hypothalamic nucleus levelipsiPamepo0.5
Ventral medial paraventricular nucleusipsiVPame-0.5
Paraventricular nucleus ventral partipsiPaVe3
Peri-paraventricular hypothalamic nucleusipsiPPa0.5
Periventricular hypothalamic nucleusipsiPe2
Posterior periventricular nucleusipsiPeP2
Preoptic periventricular nucleusipsiPePO-0.5
Subparaventricular zone of the hypothalamusipsiSPa3
Suprachiasmatic nucleusipsiSCh3
Suprachiasmatic nucleus perinuclear zoneipsiSChpnz-0.5
Supraoptic decussationipsisox-0.5
Supraoptic nucleus [Supraoptic region]ipsiSO-0.5
Episupraoptic nucleusipsiESO0
Nucleus properipsiSOnP1
Supraoptic nucleus anterior divisionipsiSOA1
Supraoptic nucleus posterior partipsiSOP1
Supraoptic nucleus vasopressin cellsipsiSOVa0
Supraoptic nucleus oxytocin cellsipsiSOo0
Area between the arcuate nucleus and the ventromedial nucleusipsiArcBVM-0.5
Ventral hypothalamic regionipsiVHR-0.5
Medial hypothalamic groupipsiMHYPOg-1
Periventricular groupipsiPEG-0.5
Mammillary bodyipsiCMAM-0.5
Medial mammillary nucleusipsiMMn-1
Premammillary nucleus ventral partipsiPMV0
Supramammillar nucleusipsiSuM-2
Fiber lamina ventral to the medial mammillary nucleusipsifLMMn-2
Perifornical nucleusipsiPeF1
Retrochiasmatic areaipsiRCh3
Retrochiasmatic area lateral partipsiRChL-0.5
Dorsochiasmatic areaipsiDRCh2
Anteromedial thalamic nucleusipsiAM3
Interoanteromedial thalamic nucleusipsiIAM1
Dorsal part of the lateral geniculate complexipsiLGd-1
Ventral part of the lateral geniculate complexipsiLGv1
Ventral part of the lateral geniculate complex medial zoneipsiLGvmz2
Central medial thalamic nucleusipsiCM3
Parafascicular thalamic nucleusipsiPF0
Rhomboid thalamic nucleusipsiRh1
Mediodorsal thalamic nucleusipsiMD3
Intermediodorsal thalamic nucleusipsiIMD3
Mediodorsal thalamic nucleus central partipsiMDC-10
Mediodorsal thalamic nucleus lateral partipsiMDL-10
Mediodorsal thalamic nucleus medial partipsiMDM-10
Submedius thalamic nucleusipsiSub0
Midline group of the dorsal thalamusipsiMTN-1
Midline group of the dorsal thalamus anterior levelipsiMTNAL-1
Paratenial thalamic nucleusipsiPT3
Paraventricular thalamic nucleusipsiPV3
Paraventricular thalamic nucleus anterior partipsiPVA2.5
Paraventricular thalamic nucleus dorsal part stellate cellsipsiPVdoSC3
Paraventricular thalamic nucleus middle divisionipsiPVMiD1
Paraventricular thalamic nucleus midrostral part ventral divisionipsiPVmrV2
Paraventricular thalamic nucleus posterior partipsiPVP1
Reuniens thalamic nucleusipsiRe3
Subfornical organipsiSFO0
Ventral posterolateral thalamic nucleusipsiVPL-0.5
Lateral posterior thalamic nucleusipsiLP1
Laterodorsal thalamic nucleusipsiLD1
Subparafascicular thalamic nucleusipsiSPF1
Subparafascicular thalamic nucleus rostral partipsiSPFr1
Zona incertaipsiZI1
Zona incerta medial partipsiZIm1
Zona incerta medial tipipsiZImt0.5
Massa intermedia of the thalamusipsiMimT-2
Optic chiasmipsiox-2
Optic tractipsiopt-2
Lateral habenular nucleusipsiLHb1
Lateral habenular nucleus medial partipsiLHbM1
Central subnucleus of the medial part of the lateral habenular nucleusipsiLHbMCe1
Pretectal regionipsiPRT1
Anterior pretectal nucleusipsiAPT1
Pineal glandipsiPi-0.5
Intermediate lobe of pituitaryipsiIPit0
Posterior lobe of pituitaryipsiPPit-0.5
RetinaipsiRET1
Retinal ganglion cellsipsiRETg-0.5
Medial forebrain bundleipsimfb-2
Medial forebrain bundle at the level of the anterior commissureipsimfbac0
Medial forebrain bundle at the level of the lateral preoptic areraipsimfbLpa0
Medial forebrain bundle at the level of the anterior hypothalamic nucleusipsimfbahn0
Medial forebrain bundle at the level of the lateral hypothalamusipsimfbLH0
Medial forebrain bundle at the level of the posterior hypothalamic nucleusipsimfbPH0
Stria medullaris of the thalamusipsism0
Amygdaloid complexipsiAC0
Basal nucleusipsiBnc2.5
Bed nucleus of the stria terminalisipsiBST2.5
Bed nucleus of the stria terminalis oval nucleusipsiBSTo2
Bed nucleus of the stria terminalis caudal partipsiBSTCa1
Bed nucleus of the stria terminalis medial divisionipsiBSTM2
Bed nucleus of the stria terminalis rostral partipsiBSTro-0.5
Bed nucleus of the stria terminalis preoptic continuationipsiBSTpoc-0.5
Central amygdaloid nucleusipsiCe2.5
Medial amygdaloid nucleusipsiMe1
Fornixipsif-2
Cingulate cortexipsiCg-0.5
Cingulate cortex layer 5ipsiCgL5-0.5
Cingulate cortex layer 6ipsiCgL6-0.5
Prelimbic cortex caudal part layer 5ipsiPrLcL5-0.5
Prelimbic cortex caudal part layer 6ipsiPrLcL6-0.5
Insular cortexipsiICX-0.5
Medial prefrontal cortexipsimPFC0
Dorsal geniculate nucleus lateral partipsiDLGl-0.5
Dorsal geniculate nucleus most caudal part of the lateral partipsiDLGlCmo0
Intergeniculate leafipsiIGL1
Lateral geniculate complex ventromedial partipsiLGvm-0.5
Ventral lateral geniculate nucleusipsiVLG2
Ventral lateral geniculate nucleus parvicellular partipsiVLGPC2
Ventral lateral geniculate nucleus most caudal partipsiVLGCmo0
Interpeduncular nucleusipsiIP-0.5
Olfactory tubercleipsiTuO-0.5
Lateral septal nucleusipsiLS3
Lateral septal nucleus intermediate partipsiLSI1
Lateral septal nucleus intermediate part ventral subdivisionipsiLSVIV1
Lateral septal nucleus ventral partipsiLSV2
Lateral septal nucleus ventrolateral partipsiLSvl1
Septofimbrial nucleus ventral partipsiSFiv-0.5
Triangular septal nucleusipsiTS-0.5
Septal region intermediate partipsiSERi1
Septohypothalamic nucleusipsiSHy2
Ventral septal regionipsiVSER3
Stria terminalisipsist0
3d ventricleipsi3V2
Cervical segment 7ipsiCS7-1
Intermediolateral cell column T5ipsiIMLT50
Intermediolateral cell column T6ipsiIMLT60
Intermediolateral cell column T7ipsiIMLT70
Intermediolateral cell column T8ipsiIMLT80
Intermediolateral cell column T9ipsiIMLT90
Intermediolateral cell column T10ipsiIMLT100
Intermediomedial cell column L1ipsiIMML1-0.5
Intermediomedial cell column L2ipsiIMML2-0.5
Intermediomedial cell column L3ipsiIMML3-0.5
Intermediomedial cell column L4ipsiIMML4-0.5
Intermediomedial cell column L5ipsiIMML5-0.5
Intermediomedial cell column L6ipsiIMML6-0.5
Periaqueductal gray rostral most partcontraPAGRmo-0.5
Red nucleuscontraR0
A5 noradrenaline cellscontraA50
Nucleus of the solitary tract caudal partcontraSolca-0.5
Inferior salivatory nucleuscontraIS0
Superior salivatory nucleuscontraSuS0
Median eminencecontraME-0.5
Preoptic regioncontraPREO3
Lateral preoptic areacontraLPO-0.5
Medial preoptic areacontraMPA1
Ventrolateral preoptic nucleuscontraVLPO-0.5
Preoptic region rostral partcontraPREOr3
Vascular organ of the lamina terminaliscontraVOLT2
Dorsomedial hypothalamic nucleus non-compact partcontraDMHyncp-0.5
Lateral zonecontraLHA-0.5
Anterior hypothalamic areacontraAHA3
Anterior hypothalamic area dorsal partcontraAHAd1
Anteroventral periventricular nucleus [Anterior hypothalamic area]contraAVPe0
Anterior hypothalamic area caudal partcontraAHAca-0.5
Dorsomedial hypothalamic nucleus [Medial zone]contraDM-0.5
Cell-sparse zone between Pe and AHAcontracsMHA1
Ventromedial hypothalamic nucleuscontraVMH-0.5
Ventromedial hypothalamic nucleus central partcontraVMHC1
Ventromedial hypothalamic nucleus ventrolateral partcontraVMHVL1
Arcuate nucleuscontraArc2
Arcuate nucleus lateral partcontraArcL-0.5
Arcuate nucleus middle partcontraArcMi-0.5
Alpha MSH-neurons of the arcuate nucleuscontraArcMSH-0.5
Nucleus paraventricularis [Periventricular zone anterior region]contraPaPAR-0.5
Paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region]contraPaMP1
Paraventricular hypothalamic nucleuscontraPa3
Paraventricular nucleus lateral parvocellular partcontraPaLp1
Paraventricular nucleus anterior partcontraPaan-2
Paraventricular nucleus medial partcontraPame0.5
Lateral to the paraventricular hypothalamic nucleus magnocellular division posterior partcontraLaTPa1
Subparaventricular zone of the hypothalamuscontraSPa3
Suprachiasmatic nucleuscontraSCh3
Suprachiasmatic nucleus ventral divisioncontraSChv1
Retrochiasmatic areacontraRCh0.5
Dorsochiasmatic areacontraDRCh1
Midline group of the dorsal thalamuscontraMTN-1
Paratenial thalamic nucleuscontraPT2
Paraventricular thalamic nucleuscontraPV2
Paraventricular thalamic nucleus anterior partcontraPVA-1
Paraventricular thalamic nucleus midrostral part ventral divisioncontraPVmrV1
Subparafascicular thalamic nucleus rostral partcontraSPFr0.5
Zona incertacontraZI0
Optic tractcontraopt-2
Stria medullaris of the thalamuscontrasm0
Basal nucleuscontraBnc1.5
Bed nucleus of the stria terminalis preoptic continuationcontraBSTpoc-0.5
Central amygdaloid nucleuscontraCe1.5
Fornixcontraf0
Intergeniculate leafcontraIGL-0.5
Ventral lateral geniculate nucleuscontraVLG2
Lateral septal nucleus ventrolateral partcontraLSvl1
Cervical segment 7contraCS7-1
Intermediomedial cell column L1contraIMML1-0.5
Intermediomedial cell column L2contraIMML2-0.5
Intermediomedial cell column L3contraIMML3-0.5
Intermediomedial cell column L4contraIMML4-0.5
Intermediomedial cell column L5contraIMML5-0.5
Intermediomedial cell column L6contraIMML6-0.5
Sciatic nerveipsisci2
MyocardiumipsiOrgsCorMyo-10
Liver sideipsiOrgsLivs1
Intercapsular brown adipose tissueipsiOrgBATi-10
Adrenal glandipsiADRE-0.5
Thyroid glandipsiOrgThyroid2
Vitreous humor of eyeipsiOrgVHEye3
Lumbar epaxial musclesipsiMuscLep-0.5
Femoral bone marrowipsiOrgSkFemM1
Intraperitoneal cavityipsiOrgiPTC0
OvaryipsiOrgOvar-10
CervixipsiOrgUTC-10
Uterine hornipsiOrgUTh-10
Middle layer of the middle portion of the uterine hornipsiOrgUTmLmph1
Uterus bodyipsiOrgUTB-10
ProstateipsiOrgProst-0.5
TestisipsiOrgTest3
KidneyipsiOrgsKid2
Vitreous humor of eyecontraOrgVHEye-0.5
OvarycontraOrgOvar-10
TestiscontraOrgTest-0.5
KidneycontraOrgsKid2
Pancreas sideipsiOrgsPancs-0.5

Input from

NameSideAbbr.WeightDetails
Central gray lateral partipsiCGL1
Parabigeminal nucleusipsiPBG2
Periaqueductal grayipsiPAG1.5
Dorsolateral periaqueductal grayipsiDLPAG3
Dorsomedial periaqueductal grayipsiDMPAG2
Lateral periaqueductal grayipsiLPAG3
Ventrolateral periaqueductal grayipsiVLPAG2
Periventricular gray matteripsiPVG2
Inferior colliculusipsiICOL1
Superior colliculusipsiSC1
Superior colliculus intermediate white layeripsiSAI2
Optic nerve layer of the superior colliculusipsiOp3
Superficial gray layer of the superior colliculusipsiSuG3
Intermediate gray layer of the superior colliculusipsiInG3
Deep gray layer of the superior colliculusipsiDpG2
Deep white layer of the superior colliculusipsiDpWh2
Ventral tegmental area A10ipsiVTA2
Ventral tegmental area A10 caudal partipsiVTAcp2
Peripeduncular nucleusipsiPP2
Laterodorsal tegmental nucleusipsiLDTg3
Dorsal tegmental nucleusipsiDTg1
Pedunculopontine tegmental nucleusipsiPPTg3
Pedunculopontine tegmental nucleus caudal partipsiPPTgC2
Pedunculopontine tegmental nucleus medial partipsiPPTgM2
Edinger Westphal nucleusipsiEW-0.5
A5 noradrenaline cellsipsiA52
Barringtons nucleusipsiBar2
Locus coeruleusipsiLC3
Prelocus coeruleus nucleusipsiPLC0
Nucleus incertusipsiNI3
Reticulotegmental nucleus of the ponsipsiRtTg3
Intermediate reticular nucleusipsiIRt2
Mesencephalic reticular formationipsiMRF-3
Cuneiforme nucleusipsiCnF2
Parabrachial nucleusipsiPB1
Parabrachial nucleus central lateral partipsiPBCeL1.5
Dorsal lateral parabrachial nucleusipsiPBDoL3
Parabrachial nucleus external divison lateral partipsiPBeDL3
Parabrachial nucleus medialipsiPBnMe0
Parabrachial nucleus ventrolateral partipsiPBveLa2
Parabrachial nucleus waist partipsiPBW0
Parabrachial nucleus superior lateralipsiPBSL3
Gigantocellular reticular nucleusipsiGi0
Gigantocellular reticular nucleus alpha partipsiGiA1
Gigantocellular reticular nucleus ventral partipsiGiV2
C3 adrenaline cellsipsiC32
Area postremaipsiAP3
Dorsomedial spinal trigeminal nucleusipsiDMSp52
Mesencephalic trigeminal nucleusipsiMe50
Principal sensory trigeminal nucleusipsiPr52
Spinal trigeminal nucleus interpolar partipsiSp5I2
Spinal trigeminal nucleus layer 1ipsiSp5ncLa12
Spinal trigeminal nucleus oral partipsiSp5O2
Trigeminal subnucleus caudalisipsi5SSC2
Vestibular nucleiipsiVnc-3
Nucleus of the solitary tractipsiSol3
Nucleus of the solitary tract caudal partipsiSolca-0.5
Nucleus of the solitary tract central partipsiSolCe2
Nucleus of the solitary tract commissural partipsiSolC2
Nucleus of the solitary tract medial partipsiSolM3
Nucleus of the solitary tract subpostremal partipsiSolsp2
Raphe nucleiipsiRAN1
Dorsal raphe nucleusipsiDR3
Dorsal raphe nucleus caudal partipsiDRC3
Dorsal raphe nucleus dorsomedial subdivisionipsiDRdm1
Dorsal raphe nucleus lateral wingipsiDRlw1
Dorsal raphe nucleus median partipsiDRM3
Dorsal raphe nucleus pontine partipsiDRPo2.5
Dorsal raphe nucleus rostral partipsiDRr0
Median raphe nucleusipsiMnR3
Superior central raphe nucleusipsiCS2
Pontine raphe nucleusipsiPnR2
Raphe magnus nucleusipsiRMg2
Raphe obscurus nucleusipsiROb2
Raphe pallidus nucleusipsiRPa1
Ventral lateral medulla oblongataipsiMVL1
Caudal ventrolateral medullaipsiCVLM2
Rostral ventrolateral medullaipsiRVLM3
Olivary pretectal nucleusipsiOPT3
Dorsal paragigantocellular nucleusipsiDPGi2
Lateral paragigantocellular nucleusipsiLPGi3
Median eminence middle portion subependymal layeripsiMEmise2
Central endopiriform system dorsal aspectipsiCEnNd2
Magnocellular basal forebrain neuronal complexipsiMBFNC-0.5
Diagonal band of BrocaipsiDBB2
Nucleus of the horizontal limb of the diagonal bandipsiHDB1
Nucleus of the vertical limb of the diagonal bandipsiVDB1
Medial septal nucleusipsiMS1
Medial septal nucleus mid-dorsal aspectipsiMSmda-0.5
Basal nucleus MeynertipsiB-0.5
Substantia innominataipsiSI3
Lateral preoptic areaipsiLPO2
Medial preoptic areaipsiMPA2
Medial preoptic area dorsolateral partipsiMPADL0
Anterodorsal preoptic nucleusipsiADP3
Medial preoptic nucleusipsiMPO3
Medial preoptic nucleus rostral partipsiMPOR1
Median preoptic nucleusipsiMnPO3
Ventrolateral preoptic nucleusipsiVLPO1
Dorsolateral preoptic regionipsiPREOdL1
Dorsal tenia tectaipsiDTT3
Ventral tenia tectaipsiVTT2
Tuberomammillary nucleusipsiTuM3
Vascular organ of the lamina terminalisipsiVOLT3
Dorsomedial hypothalamic nucleusipsiDMHy3
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC0
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR0
Lateral hypothalamic areaipsiLH3
Lateral hypothalamic area juxtadorsomedial regionipsiJDM0
Lateral hypothalamic area motor related juxtaventromedial region dorsal zoneipsiLHAjvd0
Lateral hypothalamic area motor related juxtaventromedial region ventral zoneipsiLHAjvv0
Lateral hypothalamic area perifornical partipsiPFx2
Tuberal division of the lateral hypothalamic areaipsiLHTC-0.5
Anterior hypothalamic areaipsiAHA2
Anterior hypothalamic area ventral part of central condensationipsiAHACv-0.5
Anterior hypothalamic nucleus ventromedial partipsiAHAvm-0.5
Anteroventral periventricular nucleus [Anterior hypothalamic area]ipsiAVPe1
Anterior hypothalamic area immediately caudal to the suprachiasmatic areaipsiAHAcSCh0
Anterior hypothalamic nucleusipsiAHn2
Anteroventral preoptic nucleusipsiAnV2
Dorsal hypothalamic areaipsiDA2
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM2
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM2
Dorsomedial hypothalamic nucleus rostral partipsiDMro1
Dorsomedial hypothalamic nucleus ventral partipsiDMV-0.5
Parastriatal nucleusipsiPS3
Posterior hypothalamic areaipsiPHA2
Posterior hypothalamic nucleusipsiPH2
Posterior hypothalamic nucleus caudal partipsiPHCa0
Posterior hypothalamic nucleus rostral partipsiPHRo0
Subparaventricular zoneipsiSuPZ3
Subparaventricular zone ventral partipsiSuPZv1
Lateral part of ventral subparaventricular zoneipsiSuPZvL3
Caudal subparaventricular zoneipsiCSuPZ-0.5
Subparaventricular zone ventromedial partipsiSuPZvm3
Subparaventricular zone dorsomedial partipsiSuPZdm1.5
Subparaventricular zone dorsolateral partipsiSuPZdL1
Ventromedial hypothalamic nucleusipsiVMH3
Ventromedial hypothalamic nucleus central partipsiVMHC1
Ventromedial hypothalamic nucleus dorsomedial partipsiVMHDM1
Ventromedial hypothalamic nucleus ventrolateral partipsiVMHVL2.5
Ventromedial hypothalamic nucleus ventromedial partipsiVMHvm1
Periventricular zoneipsiPVZ0
Arcuate nucleusipsiArc3
Arcuate nucleus medial partipsiArcM0.5
Arcuate nucleus ventromedial partipsiArcVM1
Nucleus paraventricularis [Periventricular zone anterior region]ipsiPaPAR-3
Paraventricular hypothalamic nucleus parvicellular part dorsomedial partipsiPaPcDM2
Paraventricular hypothalamic nucleus lateral parvocellular partipsiLPPa1
Paraventricular hypothalamic nucleus medial parvocellular partipsiMPPa3
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsiPaAP-0.5
Ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsivPaAP-0.5
Adjacent to the ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsiPaAPav-0.5
Outside the boundaries of the suprachiasmatic nucleusipsiOBSCh0
Perichiasmatic regionipsiPeCC-0.5
Paraventricular hypothalamic nucleusipsiPa3
Paraventricular hypothalamic nucleus magnocellular divisionipsiPaMag3
Anterior part of periventricular parvocellular subdivision of paraventricular hypothalamic nucleusipsiPVPapvA-0.5
Periventricular hypothalamic nucleusipsiPe-0.5
Posterior periventricular nucleusipsiPeP3
Preoptic periventricular nucleusipsiPePO0
Anteroventral part of the preoptic periventricular nucleusipsiAVPePO3
Suprachiasmatic nucleusipsiSCh3
Suprachiasmatic nucleus dorsal divisionipsiSChd0
Region dorsal to suprachiasmatic nucleusipsiSChDT0
Suprachiasmatic preoptic nucleusipsiPSCh0
Supraoptic regionipsiSoR-2
Supraoptic decussationipsisox1
Supraoptic nucleus [Supraoptic region]ipsiSO3
Border zone of the suprachiasmatic nucleusipsiSChbz1
Lateral mammillary nucleusipsiLM2
Premammillary nucleus dorsal partipsiPMD3
Premammillary nucleus ventral partipsiPMV3
Supramammillar nucleus lateral partipsiSuML1
Supramammillar nucleus lateral part lateral subpartipsiSuMLL0
Supramammillar nucleus lateral part medial subpartipsiSuMLM0
Supramammillar nucleus medial partipsiSuMM2
Perifornical nucleusipsiPeF-0.5
Retrochiasmatic areaipsiRCh2
Retrochiasmatic area immediately caudal to the suprarchiasmatic areaipsiRChcSCh0
Dorsal part of the lateral geniculate complexipsiLGd2
Ventral part of the lateral geniculate complexipsiLGv2
Parafascicular thalamic nucleusipsiPF-3
Posterior thalamic nuclear groupipsiPo0
Mediodorsal thalamic nucleusipsiMD2
Paratenial thalamic nucleusipsiPT1
Paraventricular thalamic nucleusipsiPV3
Paraventricular thalamic nucleus anterior partipsiPVA1.5
Bilobate portion of the anterior paraventricular thalamic nucleusipsiPVAbi2
Paraventricular thalamic nucleus anterior part ventral portionipsiPVAV3
Paraventricular thalamic nucleus caudal partipsiPVca2
Paraventricular thalamic nucleus dorsal partipsiPVdo2
Paraventricular thalamic nucleus middle divisionipsiPVMiD2
Paraventricular thalamic nucleus posterior partipsiPVP1.5
Paraventricular thalamic nucleus rostral partipsiPVr2
Paraventricular thalamic nucleus ventral partipsiPVV2
Reuniens thalamic nucleusipsiRe-0.5
Subfornical organipsiSFO3
Posterior intralaminar thalamic nucleusipsiPIL1
Parafascicular nucleusipsiPFa0
Lateral posterior thalamic nucleusipsiLP1
Reticular thalamic nucleusipsiRt2
Subparafascicular thalamic nucleusipsiSPF1
Subparafascicular thalamic nucleus parvicellular partipsiSPFp3
Subparafascicular thalamic nucleus rostral partipsiSPFr0
Zona incertaipsiZI1
Zona incerta rostral partipsiZIR1
Nucleus of the optic tractipsiOT1
Optic chiasmipsiox-0.5
Optic nerveipsi2n-0.5
Lateral habenular nucleusipsiLHb2
Medial habenular nucleusipsiMHb2
Pretectal regionipsiPRT2
Anterior pretectal nucleusipsiAPT1
Medial pretectal nucleusipsiMPT2
Posterior pretectal nucleusipsiPPT3
Posterior pretectal nucleus medial partipsiPPTM3
RetinaipsiRET3
Retinal ganglion cellsipsiRETg3
Retinal ganglion cells type 3ipsiRETgT3-0.5
Internal capsuleipsiic-2
Basal nucleusipsiBnc-0.5
Basolateral amygdaloid nucleusipsiBL0
Posterior basolateral nucleusipsiBLP3
Lateral amygdaloid nucleusipsiLA3
Bed nucleus of the stria terminalisipsiBST1
Bed nucleus of the stria terminalis anterior division dorsomedial nucleusipsiBSTdm1
Bed nucleus of the stria terminalis anterior dorsal areaipsiBSTAD1
Bed nucleus of the stria terminalis anterior medial partipsiBSTAM-0.5
Bed nucleus of the stria terminalis anterior ventral areaipsiBSTAV1
Bed nucleus of the stria terminalis dorsomedial partipsiBSTDoM1
Bed nucleus of the stria terminalis intraamygdaloid divisionipsiBSTIA0.5
Bed nucleus of the stria terminalis principal nucleusipsiBSTpr3
Bed nucleus of the stria terminalis ventral partipsiBNSTv0
Bed nucleus of the stria terminalis ventral tipipsiBNSTvt0
Central amygdaloid nucleusipsiCe2
Central amygdaloid nucleus lateral divisionipsiCeL0
Central amygdaloid nucleus medial divisionipsiCeM0.5
Amygdalopiriform transition areaipsiAPir3
Cortical amygdaloid nucleusipsiCAn2
Nucleus of the lateral olfactory tractipsiLOT3
Medial amygdaloid nucleusipsiMe2
Medial amygdaloid nucleus anterodorsal partipsiMeAD2
Medial amygdaloid nucleus anteroventral partipsiMeAV3
Medial amygdaloid nucleus posterodorsal partipsiMePD3
Medial amygdaloid nucleus posteroventral partipsiMePV3
Amygdalohippocampal areaipsiAHi3
Posteromedial cortical nucleusipsiPMCo2
ClaustrumipsiCl2
Globus pallidusipsiGP0
Caudate putamenipsiCPu0
Fundus of the striatumipsiFS2
Field CA1 of hippocampusipsiCA13
Field CA2 of hippocampusipsiCA23
Field CA3 of hippocampusipsiCA33
Subiculum ventral partipsiSv3
Subiculum ventral distal partipsiSvd1
Subiculum ventral part caudal subdivisionipsiSvc1
Midmediolateral caudal part of the ventral subiculumipsiSvcMM1
Subiculum ventral proximal partipsiSvp1
Ventral subiculum rostromedial partipsiSvrm1
Entorhinal cortexipsiEnt2
Lateral entorhinal cortexipsiLEnt3
Medial entorhinal cortexipsiMEnt1
Piriform cortexipsiPir3
Prelimbic cortexipsiPrL2
Infralimbic cortexipsiIL3
Infralimbic cortex layer 5ipsiILL51
Infralimbic cortex layer 6ipsiILL61
Agranular insular cortex dorsal partipsiAID3
Agranular insular cortex posterior partipsiAIP3
Agranular insular cortex ventral partipsiAIV2
Perirhinal cortexipsiA352
Ectorhinal cortexipsiA362
Dorsal peduncular cortexipsiDP2
Primary visual cortex layer 5ipsiV1L5-0.5
Medial orbital cortexipsiMO2
Ventral orbital cortexipsiVO0
Precommissural nucleusipsiPrC2
Lateral geniculate complexipsiLG2
Intergeniculate leafipsiIGL3
Intergeniculate leaf rostrocaudal partipsiIGLR1
Area between the dorsal and ventral lateral geniculate nuclei of the intergeniculate leafipsiIGLabdvL3
Region extending ventromedially towards zona incerta of the intergeniculate leafipsiIGLrevm3
Intergeniculate leaf dorsal portionipsiIGLdp3
Intergeniculate leaf ventromedial portionipsiIGLvm3
Ventral lateral geniculate nucleusipsiVLG3
Ventral lateral geniculate nucleus magnocellular partipsiVLGMC2
Ventral lateral geniculate nucleus parvicellular partipsiVLGPC3
Medial geniculate nucleusipsiMG-0.5
Ventral geniculate nucleus lateral partipsiVGL-0.5
Interpeduncular nucleusipsiIP3
Interpeduncular nucleus rostral subnucleus midrostrocaudal partipsiIPRmrc3
Glomerular layer of the olfactory bulbipsiOBglo2
Granular cell layer of the olfactory bulbipsiOBgra2
Mitral cell layer of the olfactory bulbipsiMi2
Olfactory cortex outer plexiform layeripsiOcxLopx1
Olfactory cortex inner plexiform layeripsiOcxLipx1
Anterior olfactory nucleus lateral partipsiAONl2
Anterior olfactory nucleus medial partipsiAONm3
Anterior olfactory nucleus posteroventral partipsiAONpv1
Olfactory tubercleipsiTuO1
Lateral septal nucleusipsiLS-0.5
Lateral septal nucleus dorsal partipsiLSD2
Lateral septal nucleus intermediate partipsiLSI3
Lateral septal nucleus posterior partipsiLSpp-0.5
Lateral septal nucleus ventral partipsiLSV3
Lateral septal nucleus ventrolateral partipsiLSvl2
Lateral septal nucleus mediolateral partipsiLSML0
Anteroposterior extension of the lateral septal nucleusipsiLSap-2
Ventroposterior extension of the lateral septal nucleusipsiLSvp-2
Lateral spinal nucleus C1ipsiLSpC11.5
Area X C1ipsiSCL10C11.5
Spinal cord layer 3 C1ipsiSCL3C11.5
Spinal cord layer 4 C1ipsiSCL4C12
Spinal cord layer 1 C1ipsiSCL1C12
Spinal cord layer 2 C1ipsiSCL2C12
Ventral horn C1ipsiVHC10.5
Intermediate zone C1ipsiizVHC10.5
Lateral spinal nucleus C2ipsiLSpC21.5
Area X C2ipsiSCL10C21.5
Spinal cord layer 3 C2ipsiSCL3C21.5
Spinal cord layer 4 C2ipsiSCL4C22
Spinal cord layer 1 C2ipsiSCL1C22
Spinal cord layer 2 C2ipsiSCL2C22
Ventral horn C2ipsiVHC20.5
Intermediate zone C2ipsiizVHC20.5
Lateral spinal nucleus C3ipsiLSpC31.5
Area X C3ipsiSCL10C31.5
Spinal cord layer 3 C3ipsiSCL3C31.5
Spinal cord layer 4 C3ipsiSCL4C31.5
Spinal cord layer 1 C3ipsiSCL1C31.5
Ventral horn C3ipsiVHC30.5
Intermediate zone C3ipsiizVHC30.5
Lateral spinal nucleus C4ipsiLSpC41.5
Area X C4ipsiSCL10C41.5
Spinal cord layer 3 C4ipsiSCL3C41.5
Spinal cord layer 4 C4ipsiSCL4C41.5
Spinal cord layer 1 C4ipsiSCL1C41.5
Ventral horn C4ipsiVHC40.5
Intermediate zone C4ipsiizVHC40.5
Lateral spinal nucleus C5ipsiLSpC51.5
Area X C5ipsiSCL10C51.5
Spinal cord layer 3 C5ipsiSCL3C51.5
Spinal cord layer 4 C5ipsiSCL4C51.5
Spinal cord layer 1 C5ipsiSCL1C51.5
Ventral horn C5ipsiVHC50.5
Intermediate zone C5ipsiizVHC50.5
Lateral spinal nucleus C6ipsiLSpC61.5
Area X C6ipsiSCL10C61.5
Spinal cord layer 3 C6ipsiSCL3C61.5
Spinal cord layer 4 C6ipsiSCL4C61.5
Spinal cord layer 1 C6ipsiSCL1C61.5
Ventral horn C6ipsiVHC60.5
Intermediate zone C6ipsiizVHC60.5
Lateral spinal nucleus C7ipsiLSpC71.5
Area X C7ipsiSCL10C71.5
Spinal cord layer 3 C7ipsiSCL3C71.5
Spinal cord layer 4 C7ipsiSCL4C71.5
Spinal cord layer 1 C7ipsiSCL1C71.5
Ventral horn C7ipsiVHC70.5
Intermediate zone C7ipsiizVHC70.5
Lateral spinal nucleus C8ipsiLSpC81.5
Area X C8ipsiSCL10C81.5
Spinal cord layer 3 C8ipsiSCL3C81.5
Spinal cord layer 4 C8ipsiSCL4C81.5
Spinal cord layer 1 C8ipsiSCL1C81.5
Ventral horn C8ipsiVHC80.5
Intermediate zone C8ipsiizVHC80.5
Lateral spinal nucleus T1ipsiLSpT11.5
Area X T1ipsiSCL10T11.5
Spinal cord layer 3 T1ipsiSCL3T11.5
Spinal cord layer 4 T1ipsiSCL4T11.5
Spinal cord layer 1 T1ipsiSCL1T11.5
Ventral horn T1ipsiVHT10.5
Intermediate zone T1ipsiizVHT10.5
Lateral spinal nucleus T2ipsiLSpT21.5
Area X T2ipsiSCL10T21.5
Spinal cord layer 3 T2ipsiSCL3T21.5
Spinal cord layer 4 T2ipsiSCL4T21.5
Spinal cord layer 1 T2ipsiSCL1T21.5
Ventral horn T2ipsiVHT20.5
Intermediate zone T2ipsiizVHT20.5
Lateral spinal nucleus T3ipsiLSpT31.5
Area X T3ipsiSCL10T31.5
Spinal cord layer 3 T3ipsiSCL3T31.5
Spinal cord layer 4 T3ipsiSCL4T31.5
Spinal cord layer 1 T3ipsiSCL1T31.5
Ventral horn T3ipsiVHT30.5
Intermediate zone T3ipsiizVHT30.5
Lateral spinal nucleus T4ipsiLSpT41.5
Area X T4ipsiSCL10T41.5
Spinal cord layer 3 T4ipsiSCL3T41.5
Spinal cord layer 4 T4ipsiSCL4T41.5
Spinal cord layer 1 T4ipsiSCL1T41.5
Ventral horn T4ipsiVHT40.5
Intermediate zone T4ipsiizVHT40.5
Lateral spinal nucleus T5ipsiLSpT51.5
Area X T5ipsiSCL10T51.5
Spinal cord layer 3 T5ipsiSCL3T51.5
Spinal cord layer 4 T5ipsiSCL4T51.5
Spinal cord layer 1 T5ipsiSCL1T51.5
Ventral horn T5ipsiVHT50.5
Intermediate zone T5ipsiizVHT50.5
Lateral spinal nucleus T6ipsiLSpT61.5
Area X T6ipsiSCL10T61.5
Spinal cord layer 3 T6ipsiSCL3T61.5
Spinal cord layer 4 T6ipsiSCL4T61.5
Spinal cord layer 1 T6ipsiSCL1T61.5
Ventral horn T6ipsiVHT60.5
Intermediate zone T6ipsiizVHT60.5
Lateral spinal nucleus T7ipsiLSpT71.5
Area X T7ipsiSCL10T71.5
Spinal cord layer 3 T7ipsiSCL3T71.5
Spinal cord layer 4 T7ipsiSCL4T71.5
Spinal cord layer 1 T7ipsiSCL1T71.5
Ventral horn T7ipsiVHT70.5
Intermediate zone T7ipsiizVHT70.5
Lateral spinal nucleus T8ipsiLSpT81.5
Area X T8ipsiSCL10T81.5
Spinal cord layer 3 T8ipsiSCL3T81.5
Spinal cord layer 4 T8ipsiSCL4T81.5
Spinal cord layer 1 T8ipsiSCL1T81.5
Ventral horn T8ipsiVHT80.5
Intermediate zone T8ipsiizVHT80.5
Lateral spinal nucleus T9ipsiLSpT91.5
Area X T9ipsiSCL10T91.5
Spinal cord layer 3 T9ipsiSCL3T91.5
Spinal cord layer 4 T9ipsiSCL4T91.5
Spinal cord layer 1 T9ipsiSCL1T91.5
Ventral horn T9ipsiVHT90.5
Intermediate zone T9ipsiizVHT90.5
Lateral spinal nucleus T10ipsiLSpT101.5
Area X T10ipsiSCL10T101.5
Spinal cord layer 3 T10ipsiSCL3T101.5
Spinal cord layer 4 T10ipsiSCL4T101.5
Spinal cord layer 1 T10ipsiSCL1T101.5
Ventral horn T10ipsiVHT100.5
Intermediate zone T10ipsiizVHT100.5
Lateral spinal nucleus T11ipsiLSpT111.5
Area X T11ipsiSCL10T111.5
Spinal cord layer 3 T11ipsiSCL3T111.5
Spinal cord layer 4 T11ipsiSCL4T111.5
Spinal cord layer 1 T11ipsiSCL1T111.5
Ventral horn T11ipsiVHT110.5
Intermediate zone T11ipsiizVHT110.5
Lateral spinal nucleus T12ipsiLSpT121.5
Area X T12ipsiSCL10T121.5
Spinal cord layer 3 T12ipsiSCL3T121.5
Spinal cord layer 4 T12ipsiSCL4T121.5
Spinal cord layer 1 T12ipsiSCL1T121.5
Ventral horn T12ipsiVHT120.5
Intermediate zone T12ipsiizVHT120.5
Lateral spinal nucleus T13ipsiLSpT131.5
Area X T13ipsiSCL10T131.5
Spinal cord layer 3 T13ipsiSCL3T131.5
Spinal cord layer 4 T13ipsiSCL4T131.5
Spinal cord layer 1 T13ipsiSCL1T131.5
Ventral horn T13ipsiVHT130.5
Intermediate zone T13ipsiizVHT130.5
Lateral spinal nucleus L1ipsiLSpL11.5
Area X L1ipsiSCL10L11.5
Spinal cord layer 3 L1ipsiSCL3L11.5
Spinal cord layer 4 L1ipsiSCL4L11.5
Spinal cord layer 1 L1ipsiSCL1L11.5
Ventral horn L1ipsiVHL10.5
Intermediate zone L1ipsiizVHL10.5
Lateral spinal nucleus L2ipsiLSpL21.5
Area X L2ipsiSCL10L21.5
Spinal cord layer 3 L2ipsiSCL3L21.5
Spinal cord layer 4 L2ipsiSCL4L21.5
Spinal cord layer 1 L2ipsiSCL1L21.5
Ventral horn L2ipsiVHL20.5
Intermediate zone L2ipsiizVHL20.5
Lateral spinal nucleus L3ipsiLSpL31.5
Area X L3ipsiSCL10L31.5
Spinal cord layer 3 L3ipsiSCL3L31.5
Spinal cord layer 4 L3ipsiSCL4L31.5
Spinal cord layer 1 L3ipsiSCL1L31.5
Ventral horn L3ipsiVHL30.5
Intermediate zone L3ipsiizVHL30.5
Lateral spinal nucleus L4ipsiLSpL41.5
Area X L4ipsiSCL10L41.5
Spinal cord layer 3 L4ipsiSCL3L41.5
Spinal cord layer 4 L4ipsiSCL4L41.5
Spinal cord layer 1 L4ipsiSCL1L41.5
Ventral horn L4ipsiVHL40.5
Intermediate zone L4ipsiizVHL40.5
Lateral spinal nucleus L5ipsiLSpL51.5
Area X L5ipsiSCL10L51.5
Spinal cord layer 3 L5ipsiSCL3L51.5
Spinal cord layer 4 L5ipsiSCL4L51.5
Spinal cord layer 1 L5ipsiSCL1L51.5
Ventral horn L5ipsiVHL50.5
Intermediate zone L5ipsiizVHL50.5
Lateral spinal nucleus L6ipsiLSpL61.5
Area X L6ipsiSCL10L61.5
Spinal cord layer 3 L6ipsiSCL3L61.5
Spinal cord layer 4 L6ipsiSCL4L61.5
Spinal cord layer 1 L6ipsiSCL1L61.5
Ventral horn L6ipsiVHL60.5
Intermediate zone L6ipsiizVHL60.5
Lateral spinal nucleus S1ipsiLSpS11.5
Area X S1ipsiSCL10S11.5
Spinal cord layer 3 S1ipsiSCL3S11.5
Spinal cord layer 4 S1ipsiSCL4S11.5
Spinal cord layer 1 S1ipsiSCL1S11.5
Ventral horn S1ipsiVHSa10.5
Intermediate zone S1ipsiizVHS10.5
Lateral spinal nucleus S2ipsiLSpS21.5
Area X S2ipsiSCL10S21.5
Spinal cord layer 3 S2ipsiSCL3S21.5
Spinal cord layer 4 S2ipsiSCL4S21.5
Spinal cord layer 1 S2ipsiSCL1S21.5
Ventral horn S2ipsiVHSa20.5
Intermediate zone S2ipsiizVHS20.5
Lateral spinal nucleus S3ipsiLSpS31.5
Area X S3ipsiSCL10S31.5
Spinal cord layer 3 S3ipsiSCL3S31.5
Spinal cord layer 4 S3ipsiSCL4S31.5
Spinal cord layer 1 S3ipsiSCL1S31.5
Ventral horn S3ipsiVHSa30.5
Intermediate zone S3ipsiizVHS30.5
Lateral spinal nucleus S4ipsiLSpS41.5
Area X S4ipsiSCL10S41.5
Spinal cord layer 3 S4ipsiSCL3S41.5
Spinal cord layer 4 S4ipsiSCL4S41.5
Spinal cord layer 1 S4ipsiSCL1S41.5
Ventral horn S4ipsiVHSa40.5
Intermediate zone S4ipsiizVHS40.5
Lateral spinal nucleus Co1ipsiLSpCo11.5
Ventral horn Co1ipsiVHCo10.5
Intermediate zone Co1ipsiizVHCo10.5
Lateral spinal nucleus Co2ipsiLSpCo21.5
Ventral horn Co2ipsiVHCo20.5
Intermediate zone Co2ipsiizVHCo20.5
Lateral spinal nucleus Co3ipsiLSpCo31.5
Ventral horn Co3ipsiVHCo30.5
Intermediate zone Co3ipsiizVHCo30.5
Principal sensory trigeminal nucleuscontraPr52
Spinal trigeminal nucleus interpolar partcontraSp5I2
Spinal trigeminal nucleus oral partcontraSp5O2
Trigeminal subnucleus caudaliscontra5SSC2
Nucleus of the solitary tractcontraSol-0.5
Dorsal raphe nucleus caudal partcontraDRC2.5
Magnocellular basal forebrain neuronal complexcontraMBFNC-0.5
Basal nucleus MeynertcontraB-0.5
Substantia innominatacontraSI-0.5
Preoptic regioncontraPREO1
Medial preoptic areacontraMPA0.5
Dorsomedial hypothalamic nucleus [Medial zone]contraDM0.5
Posterior hypothalamic nucleuscontraPH1
Lateral part of ventral subparaventricular zonecontraSuPZvL-0.5
Caudal subparaventricular zonecontraCSuPZ-2
Ventromedial hypothalamic nucleuscontraVMH1
Ventromedial hypothalamic nucleus central partcontraVMHC1
Ventromedial hypothalamic nucleus ventrolateral partcontraVMHVL1
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]contraPaAP-0.5
Ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]contravPaAP-0.5
Adjacent to the ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]contraPaAPav-0.5
Paraventricular hypothalamic nucleuscontraPa0.5
Anterior part of periventricular parvocellular subdivision of paraventricular hypothalamic nucleuscontraPVPapvA-0.5
Suprachiasmatic nucleuscontraSCh3
Suprachiasmatic nucleus dorsal divisioncontraSChd3
Suprachiasmatic nucleus dorsomedial partcontraSCnDM-0.5
Suprachiasmatic nucleus ventral divisioncontraSChv3
Suprachiasmatic nucleus ventrolateral partcontraSCnVL-0.5
Suprachiasmatic nucleus rostral partcontraSChR3
Border zone of the suprachiasmatic nucleuscontraSChbz0
Premammillary nucleus ventral partcontraPMV0.5
Perifornical nucleuscontraPeF-0.5
Paraventricular thalamic nucleus dorsal partcontraPVdo1
Paraventricular thalamic nucleus rostral partcontraPVr1
Zona incertacontraZI0.5
RetinacontraRET3
Retinal ganglion cellscontraRETg3
Bed nucleus of the stria terminaliscontraBST0.5
Central amygdaloid nucleuscontraCe0.5
Medial amygdaloid nucleuscontraMe0.5
Subiculum ventral partcontraSv0.5
Infralimbic cortexcontraIL0.5
Intergeniculate leafcontraIGL3
Area between the dorsal and ventral lateral geniculate nuclei of the intergeniculate leafcontraIGLabdvL-0.5
Region extending ventromedially towards zona incerta of the intergeniculate leafcontraIGLrevm-0.5
Intergeniculate leaf dorsal portioncontraIGLdp-0.5
Intergeniculate leaf ventromedial portioncontraIGLvm-0.5
Ventral lateral geniculate nucleuscontraVLG2
Lateral septal nucleus ventral partcontraLSV1
Lateral spinal nucleus C1contraLSpC13
Area X C1contraSCL10C13
Spinal cord layer 3 C1contraSCL3C13
Spinal cord layer 4 C1contraSCL4C13
Spinal cord layer 1 C1contraSCL1C13
Spinal cord layer 2 C1contraSCL2C12
Ventral horn C1contraVHC13
Intermediate zone C1contraizVHC13
Lateral spinal nucleus C2contraLSpC23
Area X C2contraSCL10C23
Spinal cord layer 3 C2contraSCL3C23
Spinal cord layer 4 C2contraSCL4C23
Spinal cord layer 1 C2contraSCL1C23
Spinal cord layer 2 C2contraSCL2C22
Ventral horn C2contraVHC23
Intermediate zone C2contraizVHC23
Lateral spinal nucleus C3contraLSpC33
Area X C3contraSCL10C33
Spinal cord layer 3 C3contraSCL3C33
Spinal cord layer 4 C3contraSCL4C33
Spinal cord layer 1 C3contraSCL1C33
Ventral horn C3contraVHC33
Intermediate zone C3contraizVHC33
Lateral spinal nucleus C4contraLSpC43
Area X C4contraSCL10C43
Spinal cord layer 3 C4contraSCL3C43
Spinal cord layer 4 C4contraSCL4C43
Spinal cord layer 1 C4contraSCL1C43
Ventral horn C4contraVHC43
Intermediate zone C4contraizVHC43
Lateral spinal nucleus C5contraLSpC53
Area X C5contraSCL10C53
Spinal cord layer 3 C5contraSCL3C53
Spinal cord layer 4 C5contraSCL4C53
Spinal cord layer 1 C5contraSCL1C53
Ventral horn C5contraVHC53
Intermediate zone C5contraizVHC53
Lateral spinal nucleus C6contraLSpC63
Area X C6contraSCL10C63
Spinal cord layer 3 C6contraSCL3C63
Spinal cord layer 4 C6contraSCL4C63
Spinal cord layer 1 C6contraSCL1C63
Ventral horn C6contraVHC63
Intermediate zone C6contraizVHC63
Lateral spinal nucleus C7contraLSpC73
Area X C7contraSCL10C73
Spinal cord layer 3 C7contraSCL3C73
Spinal cord layer 4 C7contraSCL4C73
Spinal cord layer 1 C7contraSCL1C73
Ventral horn C7contraVHC73
Intermediate zone C7contraizVHC73
Lateral spinal nucleus C8contraLSpC83
Area X C8contraSCL10C83
Spinal cord layer 3 C8contraSCL3C83
Spinal cord layer 4 C8contraSCL4C83
Spinal cord layer 1 C8contraSCL1C83
Ventral horn C8contraVHC83
Intermediate zone C8contraizVHC83
Lateral spinal nucleus T1contraLSpT13
Area X T1contraSCL10T13
Spinal cord layer 3 T1contraSCL3T13
Spinal cord layer 4 T1contraSCL4T13
Spinal cord layer 1 T1contraSCL1T13
Ventral horn T1contraVHT13
Intermediate zone T1contraizVHT13
Lateral spinal nucleus T2contraLSpT23
Area X T2contraSCL10T23
Spinal cord layer 3 T2contraSCL3T23
Spinal cord layer 4 T2contraSCL4T23
Spinal cord layer 1 T2contraSCL1T23
Ventral horn T2contraVHT23
Intermediate zone T2contraizVHT23
Lateral spinal nucleus T3contraLSpT33
Area X T3contraSCL10T33
Spinal cord layer 3 T3contraSCL3T33
Spinal cord layer 4 T3contraSCL4T33
Spinal cord layer 1 T3contraSCL1T33
Ventral horn T3contraVHT33
Intermediate zone T3contraizVHT33
Lateral spinal nucleus T4contraLSpT43
Area X T4contraSCL10T43
Spinal cord layer 3 T4contraSCL3T43
Spinal cord layer 4 T4contraSCL4T43
Spinal cord layer 1 T4contraSCL1T43
Ventral horn T4contraVHT43
Intermediate zone T4contraizVHT43
Lateral spinal nucleus T5contraLSpT53
Area X T5contraSCL10T53
Spinal cord layer 3 T5contraSCL3T53
Spinal cord layer 4 T5contraSCL4T53
Spinal cord layer 1 T5contraSCL1T53
Ventral horn T5contraVHT53
Intermediate zone T5contraizVHT53
Lateral spinal nucleus T6contraLSpT63
Area X T6contraSCL10T63
Spinal cord layer 3 T6contraSCL3T63
Spinal cord layer 4 T6contraSCL4T63
Spinal cord layer 1 T6contraSCL1T63
Ventral horn T6contraVHT63
Intermediate zone T6contraizVHT63
Lateral spinal nucleus T7contraLSpT73
Area X T7contraSCL10T73
Spinal cord layer 3 T7contraSCL3T73
Spinal cord layer 1 T7contraSCL1T73
Spinal cord layer 4 T7contraSCL4T73
Ventral horn T7contraVHT73
Intermediate zone T7contraizVHT73
Lateral spinal nucleus T8contraLSpT83
Area X T8contraSCL10T83
Spinal cord layer 3 T8contraSCL3T83
Spinal cord layer 4 T8contraSCL4T83
Spinal cord layer 1 T8contraSCL1T83
Ventral horn T8contraVHT83
Intermediate zone T8contraizVHT83
Lateral spinal nucleus T9contraLSpT93
Area X T9contraSCL10T93
Spinal cord layer 3 T9contraSCL3T93
Spinal cord layer 4 T9contraSCL4T93
Spinal cord layer 1 T9contraSCL1T93
Ventral horn T9contraVHT93
Intermediate zone T9contraizVHT93
Lateral spinal nucleus T10contraLSpT103
Area X T10contraSCL10T103
Spinal cord layer 3 T10contraSCL3T103
Spinal cord layer 4 T10contraSCL4T103
Spinal cord layer 1 T10contraSCL1T103
Ventral horn T10contraVHT103
Intermediate zone T10contraizVHT103
Lateral spinal nucleus T11contraLSpT113
Area X T11contraSCL10T113
Spinal cord layer 3 T11contraSCL3T113
Spinal cord layer 4 T11contraSCL4T113
Spinal cord layer 1 T11contraSCL1T113
Ventral horn T11contraVHT113
Intermediate zone T11contraizVHT113
Lateral spinal nucleus T12contraLSpT123
Area X T12contraSCL10T123
Spinal cord layer 3 T12contraSCL3T123
Spinal cord layer 4 T12contraSCL4T123
Spinal cord layer 1 T12contraSCL1T123
Ventral horn T12contraVHT123
Intermediate zone T12contraizVHT123
Lateral spinal nucleus T13contraLSpT133
Area X T13contraSCL10T133
Spinal cord layer 3 T13contraSCL3T133
Spinal cord layer 4 T13contraSCL4T133
Spinal cord layer 1 T13contraSCL1T133
Ventral horn T13contraVHT133
Intermediate zone T13contraizVHT133
Lateral spinal nucleus L1contraLSpL13
Area X L1contraSCL10L13
Spinal cord layer 3 L1contraSCL3L13
Spinal cord layer 4 L1contraSCL4L13
Spinal cord layer 1 L1contraSCL1L13
Ventral horn L1contraVHL13
Intermediate zone L1contraizVHL13
Lateral spinal nucleus L2contraLSpL23
Area X L2contraSCL10L23
Spinal cord layer 3 L2contraSCL3L23
Spinal cord layer 4 L2contraSCL4L23
Spinal cord layer 1 L2contraSCL1L23
Ventral horn L2contraVHL23
Intermediate zone L2contraizVHL23
Lateral spinal nucleus L3contraLSpL33
Area X L3contraSCL10L33
Spinal cord layer 3 L3contraSCL3L33
Spinal cord layer 4 L3contraSCL4L33
Spinal cord layer 1 L3contraSCL1L33
Ventral horn L3contraVHL33
Intermediate zone L3contraizVHL33
Lateral spinal nucleus L4contraLSpL43
Area X L4contraSCL10L43
Spinal cord layer 3 L4contraSCL3L43
Spinal cord layer 4 L4contraSCL4L43
Spinal cord layer 1 L4contraSCL1L43
Ventral horn L4contraVHL43
Intermediate zone L4contraizVHL43
Lateral spinal nucleus L5contraLSpL53
Area X L5contraSCL10L53
Spinal cord layer 3 L5contraSCL3L53
Spinal cord layer 4 L5contraSCL4L53
Spinal cord layer 1 L5contraSCL1L53
Ventral horn L5contraVHL53
Intermediate zone L5contraizVHL53
Lateral spinal nucleus L6contraLSpL63
Area X L6contraSCL10L63
Spinal cord layer 3 L6contraSCL3L63
Spinal cord layer 4 L6contraSCL4L63
Spinal cord layer 1 L6contraSCL1L63
Ventral horn L6contraVHL63
Intermediate zone L6contraizVHL63
Lateral spinal nucleus S1contraLSpS13
Area X S1contraSCL10S13
Spinal cord layer 3 S1contraSCL3S13
Spinal cord layer 4 S1contraSCL4S13
Spinal cord layer 1 S1contraSCL1S13
Ventral horn S1contraVHSa13
Intermediate zone S1contraizVHS13
Lateral spinal nucleus S2contraLSpS23
Area X S2contraSCL10S23
Spinal cord layer 3 S2contraSCL3S23
Spinal cord layer 4 S2contraSCL4S23
Spinal cord layer 1 S2contraSCL1S23
Ventral horn S2contraVHSa23
Intermediate zone S2contraizVHS23
Lateral spinal nucleus S3contraLSpS33
Area X S3contraSCL10S33
Spinal cord layer 3 S3contraSCL3S33
Spinal cord layer 4 S3contraSCL4S33
Spinal cord layer 1 S3contraSCL1S33
Ventral horn S3contraVHSa33
Intermediate zone S3contraizVHS33
Lateral spinal nucleus S4contraLSpS43
Area X S4contraSCL10S43
Spinal cord layer 3 S4contraSCL3S43
Spinal cord layer 4 S4contraSCL4S43
Spinal cord layer 1 S4contraSCL1S43
Ventral horn S4contraVHSa43
Intermediate zone S4contraizVHS43
Lateral spinal nucleus Co1contraLSpCo13
Ventral horn Co1contraVHCo13
Intermediate zone Co1contraizVHCo13
Lateral spinal nucleus Co2contraLSpCo23
Ventral horn Co2contraVHCo23
Intermediate zone Co2contraizVHCo23
Lateral spinal nucleus Co3contraLSpCo33
Ventral horn Co3contraVHCo33
Intermediate zone Co3contraizVHCo33
Vitreous humor of eyecontraOrgVHEye4

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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