Department of Anatomy University of Rostock

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Rat connectome

Subiculum stratum radiatum left

Abbreviation	Surad
Color
Superior regions	Subiculum layers

Synonyms	Abbr.	Language
Subiculum stratum radiatum	Surad
Subiculum layer 3	SuL3
Subiculum stratum radiatum
Subiculum stratum radiatum	SLsr
Subiculum stratum layer 2		Eng

Output to

Name	Side	Abbr.	Weight
Medial mammillary nucleus lateral part	ipsi	ML	2
Lateral prefrontal cortex	ipsi	lPFC	0.5
Ventral medial prefrontal cortex	ipsi	vmPFC	0.5

Input from

Name	Side	Abbr.	Weight
Posterior basolateral nucleus	ipsi	BLP	3
Posterior basomedial nucleus	ipsi	BMP	3
Amygdalopiriform transition area	ipsi	APir	2
Medial amygdaloid nucleus anterodorsal part	ipsi	MeAD	2
Field CA1 of hippocampus	ipsi	CA1	-0.5
Field CA1 of hippocampus layer stratum pyramidal cells	ipsi	CA1L3spc	-0.5
Field CA1 of hippocampus septal part	ipsi	CA1sep	-0.5
Medial entorhinal cortex layer 2 stellate neurons	ipsi	MEntLyL2st	3
Medial entorhinal cortex layer 2 pyramidal like cells	ipsi	MEntLyL2pyL	3
Medial entorhinal cortex layer 2 multipolar cells	ipsi	MEntLyL2mpc	3
Medial entorhinal cortex layer 3 pyramidal neurons type 1	ipsi	MEntLyL3pyT1	4
Medial entorhinal cortex layer 3 pyramidal neurons type 2	ipsi	MEntLyL3pyT2	4
Medial entorhinal cortex layer 3 multipolar cells	ipsi	MEntLyL3mpc	4
Medial entorhinal cortex layer 4 multipolar cells	ipsi	MEntLyL4mpc	3
Medial entorhinal cortex layer 4 deep layer pyramid cells	ipsi	MEntLyL4pyc	3
Medial entorhinal cortex layer 4 inverted pyramid cells	ipsi	MEntLyL4ipy	3
Medial entorhinal cortex layer 4 vertical bipolar cells	ipsi	MEntLyL4vbc	3
Medial entorhinal cortex layer 5 multipolar cells	ipsi	MEntLyL5mpc	3
Medial entorhinal cortex layer 5 deep layer pyramid cells	ipsi	MEntLyL5pyc	3
Medial entorhinal cortex layer 5 inverted pyramid cells	ipsi	MEntLyL5ipc	3
Medial entorhinal cortex layer 5 vertical bipolar cells	ipsi	MEntLyL5vbc	3
Medial entorhinal cortex layer 6 deep layer pyramidal cells	ipsi	MEntLyL6pyc	2
Medial entorhinal cortex layer 6 vertical bipolar cells	ipsi	MEntLyL6vbc	2
Medial entorhinal cortex layer 6 multipolar cells	ipsi	MEntLyL6mpc	2
Medial entorhinal cortex layer 6 inverted pyramid cells	ipsi	MEntLyL6ipc	2
Perirhinal cortex	ipsi	A35	1

Key for weights

Value	Weight
-3	unknown
-2	fibers of passage
-1	not clear
-0.5	exists
0	not present
0.5	very light
1	light / sparse
1.5	light / moderate
2	moderate / dense
2.5	moderate / strong
3	strong
4	very strong