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Rat connectome



Primary somatosensory cortex forelimb region forepaw left


Abbreviation
S1FP
Color       
Superior regionsPrimary somatosensory cortex forelimb region

SynonymsAbbr.Language
Primary somatosensory cortex forelimb region forepawS1FPEng

SubregionsSide
Primary somatosensory cortex forelimb region forepaw layersleft
Primary somatosensory cortex forelimb region forepaw rostral partleft
Primary somatosensory cortex forelimb region caudal forepawleft

Output to

NameSideAbbr.WeightDetails
Proper posterior interposed nucleusipsiCERPpin3
Angular thalamic nucleusipsiAng1
Medial part of posterior thalamic nuclear groupipsiPoM-0.5
Ventromedial part of the medial part of posterior thalamic nuclear groupipsiPoMVM-0.5
Lateral ventroposteromedial thalamic nucleusipsiLVPM3
Central part of the caudal part of the ventroposterior lateral thalamic nucleusipsiVPTLCC1
Ventroposterior thalamic nucleus most rostral levelsipsiVPTRoL1
Ventrobasal complexipsiVB3
Ventral posterolateral thalamic nucleus rostral partipsiVPLro1
Ventrobasal thalamic complex ventromedial partipsiVBvm3
Border region between the ventrolateral thalamic nucleus and the ventroposterior thalamic nucleusipsiVLTbVPT1
Reticular thalamic nucleusipsiRt3
Parietal rhinal cortexipsiPaRH-0.5
Lateral parietal association cortexipsiLPtA-0.5
Medial parietal association cortexipsiMPtA-0.5
Parietal cortex ventral area layer 5ipsiParVL53
Parietal cortex ventral area layer 6ipsiParVL63
Parietal cortex ventral area layer 4ipsiParVL42.5
Parietal cortex ventral area layer 1ipsiParVL11.5
Parietal cortex ventral area layer 2ipsiParVL21.5
Parietal cortex ventral area layer 3ipsiParVL32.5
Lateral agranular prefrontal cortexipsiAGl-0.5
Whisker motor cortex C3ipsiWMCxC33
Rostral whisker motor areaipsiRWMA-0.5
Primary motor cortex located parallel and anterior to primary somatosensory cortex forelimb region layer 1ipsiAGlapfL11.5
Primary motor cortex located parallel and anterior to primary somatosensory cortex forelimb region layer 2ipsiAGlapfL21.5
Primary motor cortex located parallel and anterior to primary somatosensory cortex forelimb region layer 3ipsiAGlapfL31.5
Primary motor cortex located parallel and anterior to primary somatosensory cortex forelimb region layer 4ipsiAGlapfL42
Primary motor cortex located parallel and anterior to primary somatosensory cortex forelimb region layer 5ipsiAGlapfL53
Primary motor cortex located parallel and anterior to primary somatosensory cortex forelimb region layer 6ipsiAGlapfL63
Primary motor cortex located parallel and anterior to primary somatosensory cortex forelimb region layer 6bipsiAGlapfL6b0
Medial agranular prefrontal cortexipsiAGm-0.5
Medial agranular prefrontal cortex rostral part layer 1ipsirAGmL10.5
Medial agranular prefrontal cortex rostral part layer 2ipsirAGmL20.5
Medial agranular prefrontal cortex rostral part layer 3ipsirAGmL30.5
Medial agranular prefrontal cortex rostral part layer 4ipsirAGmL40.5
Medial agranular prefrontal cortex rostral part layer 5ipsirAGmL51
Medial agranular prefrontal cortex rostral part layer 6ipsirAGmL61
Medial agranular prefrontal cortex rostral part layer 6bipsirAGmL6b0
Posteromedial barrel subfieldipsiPMBSF-0.5
Posteromedial barrel subfield C3ipsiPMBSFC3-0.5
Primary somatosensory cortex lower lip regionipsiS1LL-0.5
Primary somatosensory cortex upper lip regionipsiS1ULp-0.5
Primary somatosensory cortex central intercalated zoneipsiS1iZce3
Primary somatosensory cortex forelimb regionipsiS1FL-0.5
Primary somatosensory cortex forelimb region layer 1ipsiS1FL13
Primary somatosensory cortex forelimb region layer 2ipsiS1FL23
Primary somatosensory cortex forelimb region layer 3ipsiS1FL33
Primary somatosensory cortex forelimb region layer 4ipsiS1FL42.5
Primary somatosensory cortex forelimb region layer 5ipsiS1FL52.5
Primary somatosensory cortex forelimb region layer 6ipsiS1FL62.5
Primary somatosensory cortex hindlimb region layer 1ipsiS1HL13
Primary somatosensory cortex hindlimb region layer 2ipsiS1HL23
Primary somatosensory cortex hindlimb region layer 3ipsiS1HL33
Primary somatosensory cortex hindlimb region layer 4ipsiS1HL42.5
Primary somatosensory cortex hindlimb region layer 5ipsiS1HL52.5
Primary somatosensory cortex hindlimb region layer 6ipsiS1HL62.5
Primary somatosensory cortex hindlimb toe regionipsiS1HLT-0.5
Caudomedial area to the primary somatosensory cortex trunk regionipsiS1Trcm2
Primary somatosensory cortex perigranular zoneipsiS1PZ3
Posterior and medial transitional zone of primary somatosensory cortex just in front of S1 granular forepaw region ipsiS1pmT3
Secondary somatosensory cortexipsiS23
Secondary somatosensory cortex layer 1ipsiS2L10.5
Secondary somatosensory cortex layer 2ipsiS2L20.5
Secondary somatosensory cortex layer 3ipsiS2L31.5
Secondary somatosensory cortex layer 4ipsiS2L41.5
Secondary somatosensory cortex layer 5ipsiS2L52
Secondary somatosensory cortex layer 6ipsiS2L62
Secondary somatosensory cortex close to the S1/S2 borderipsiS2brs1s21.5
Cervical segment 6ipsiCS6-0.5
Cervical segment 7ipsiCS7-0.5
Cervical segment 8ipsiCS8-0.5
Thoracal segment 1ipsiT1-0.5
Primary somatosensory cortexcontraS1-0.5
Primary somatosensory cortex layer 5contraS1L5-0.5
Primary somatosensory cortex layer 4contraS1L4-0.5
Primary somatosensory cortex forelimb region forepaw layer 2contraS1FPL2-0.5
Primary somatosensory cortex forelimb region forepaw layer 3contraS1FPL3-0.5
Primary somatosensory cortex forelimb region forepaw layer 4contraS1FPL4-0.5
Primary somatosensory cortex forelimb region forepaw layer 5contraS1FPL53
Caudomedial area to the primary somatosensory cortex trunk regioncontraS1Trcm-0.5
Secondary somatosensory cortexcontraS2-0.5
Secondary somatosensory cortex close to the S1/S2 bordercontraS2brs1s2-0.5
Cervical segment 6contraCS6-0.5
Cervical segment 7contraCS7-0.5
Cervical segment 8contraCS8-0.5
Thoracal segment 1contraT1-0.5

Input from

NameSideAbbr.WeightDetails
Ventrobasal complexipsiVB-0.5
Ventral posterolateral thalamic nucleus central partipsiVPLc0.5
Ventral posterolateral thalamic nucleus ventral fringeipsiVPLVf0.5
Parietal rhinal cortexipsiPaRH-0.5
Lateral parietal association cortexipsiLPtA-0.5
Medial parietal association cortexipsiMPtA-0.5
Parietal cortex ventral areaipsiParV-0.5
Parietal cortex ventral area layer 5ipsiParVL53
Parietal cortex ventral area layer 6ipsiParVL63
Parietal cortex ventral area layer 4ipsiParVL42.5
Parietal cortex ventral area layer 1ipsiParVL11.5
Parietal cortex ventral area layer 2ipsiParVL21.5
Parietal cortex ventral area layer 3ipsiParVL32.5
Lateral agranular prefrontal cortexipsiAGl2
Forelimb motor cortexipsiFMCx3
Lateral agranular prefrontal cortex layer 2ipsiAGlL21.5
Lateral agranular prefrontal cortex layer 3ipsiAGlL31.5
Lateral agranular prefrontal cortex layer 4ipsiAGlL42
Lateral agranular prefrontal cortex layer 5ipsiAGlL53
Lateral agranular prefrontal cortex layer 6aipsiAGlL6a3
Primary motor cortex located parallel and anterior to primary somatosensory cortex forelimb region layer 2ipsiAGlapfL21.5
Primary motor cortex located parallel and anterior to primary somatosensory cortex forelimb region layer 3ipsiAGlapfL31.5
Primary motor cortex located parallel and anterior to primary somatosensory cortex forelimb region layer 4ipsiAGlapfL42
Primary motor cortex located parallel and anterior to primary somatosensory cortex forelimb region layer 5ipsiAGlapfL53
Primary motor cortex located parallel and anterior to primary somatosensory cortex forelimb region layer 6aipsiAGlapfL6a3
Medial agranular prefrontal cortexipsiAGm-0.5
Medial agranular prefrontal cortex rostral part layer 2ipsirAGmL20.5
Medial agranular prefrontal cortex rostral part layer 3ipsirAGmL30.5
Medial agranular prefrontal cortex rostral part layer 4ipsirAGmL40.5
Medial agranular prefrontal cortex rostral part layer 5ipsirAGmL51
Medial agranular prefrontal cortex rostral part layer 6aipsirAGmL6a1
Posteromedial barrel subfieldipsiPMBSF-0.5
Posteromedial barrel subfield C3ipsiPMBSFC3-0.5
Primary somatosensory cortex lower lip regionipsiS1LL-0.5
Primary somatosensory cortex upper lip regionipsiS1ULp-0.5
Primary somatosensory cortex central intercalated zoneipsiS1iZce3
Primary somatosensory cortex forelimb regionipsiS1FL-0.5
Primary somatosensory cortex forelimb region layer 2ipsiS1FL23
Primary somatosensory cortex forelimb region layer 3ipsiS1FL33
Primary somatosensory cortex forelimb region layer 4ipsiS1FL42
Primary somatosensory cortex forelimb region layer 5ipsiS1FL51.5
Primary somatosensory cortex forelimb region layer 6ipsiS1FL61.5
Primary somatosensory cortex hindlimb region layer 2ipsiS1HL21.5
Primary somatosensory cortex hindlimb region layer 3ipsiS1HL31.5
Primary somatosensory cortex hindlimb region layer 4ipsiS1HL41
Primary somatosensory cortex hindlimb region layer 5ipsiS1HL50.5
Primary somatosensory cortex hindlimb region layer 6ipsiS1HL60.5
Primary somatosensory cortex hindlimb toe regionipsiS1HLT-0.5
Primary somatosensory cortex perigranular zoneipsiS1PZ3
Posterior and medial transitional zone of primary somatosensory cortex just in front of S1 granular forepaw region ipsiS1pmT3
Secondary somatosensory cortexipsiS23
Secondary somatosensory cortex layer 1ipsiS2L10.5
Secondary somatosensory cortex layer 2ipsiS2L22
Secondary somatosensory cortex layer 3ipsiS2L33
Secondary somatosensory cortex layer 4ipsiS2L41.5
Secondary somatosensory cortex layer 5ipsiS2L53
Secondary somatosensory cortex layer 6ipsiS2L63
Secondary somatosensory cortex close to the S1/S2 borderipsiS2brs1s21.5
Primary somatosensory cortex layer 5contraS1L53
Primary somatosensory cortex layer 6contraS1L63
Primary somatosensory cortex layer 2contraS1L22.5
Primary somatosensory cortex layer 3contraS1L33
Secondary somatosensory cortexcontraS2-0.5
Secondary somatosensory cortex close to the S1/S2 bordercontraS2brs1s2-0.5
Cervical segment 6contraCS6-0.5
Cervical segment 7contraCS7-0.5
Cervical segment 8contraCS8-0.5
Thoracal segment 1contraT1-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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