University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Spinal gray matter right


Abbreviation
SGM
Color       
Superior regionsSpinal segments

SynonymsAbbr.Language
Spinal gray matterSGMEng

Output to

NameSideAbbr.WeightDetails
Spinal cord layers C2contraSCLC21
Spinal cord layers T10contraSCLT101
Spinal cord layers C2ipsiSCLC21
Spinal cord layers T10ipsiSCLT101

Input from

NameSideAbbr.WeightDetails
Red nucleuscontraR2
Ventrolateral tegmental areacontraVLTg2
Pedunculopontine tegmental nucleuscontraPPTg-0.5
Midline reticular formationcontraMiRF1
Gigantocellular reticular nucleuscontraGi2
Gigantocellular reticular nucleus alpha partcontraGiA2
Vestibular nucleicontraVnc1
Raphe magnus nucleuscontraRMg2
Raphe obscurus nucleuscontraROb2
Raphe pallidus nucleuscontraRPa2
A11 dopamine cellscontraA111
Forelimb motor cortexcontraFMCx2
Substantia nigra A9ipsiSN0
Substantia nigra compact partipsiSNC0
Ventral tegmental area A10ipsiVTA0
Pedunculopontine tegmental nucleusipsiPPTg-0.5
Locus coeruleusipsiLC2
Midline reticular formationipsiMiRF1
Ventral reticular formationipsiVRF2
Gigantocellular reticular nucleusipsiGi2
Gigantocellular reticular nucleus alpha partipsiGiA2
Subnucleus reticularis dorsalis dorsal partipsiSRDD-0.5
Subcoeruleus nucleusipsiSubC2
Vestibular nucleiipsiVnc1
Raphe magnus nucleusipsiRMg2
Raphe obscurus nucleusipsiROb2
Raphe pallidus nucleusipsiRPa2
Lateral hypothalamic areaipsiLH3
Paraventricular hypothalamic nucleusipsiPa3
A11 dopamine cellsipsiA113
A13 dopamine cellsipsiA131
A8 dopamine cells retrorubral groupipsiRRF0
Rostral periventricular cell groupipsiA141
Primary somatosensory cortexipsiS1-0.5
Somatomotoric regions layer 5ipsiSMRL5-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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