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Rat connectome



Pedunculopontine tegmental nucleus right


Abbreviation
PPTg
Color       
Superior regionsMesencephalic locomotor region

SynonymsAbbr.Language
 NPP 
 PTgEng
Tegmental reticular pedunculopontine nucleus  
Pedunculopontine complex  
Pedunculopontine tegmental area Eng
Pedunculopontine tegmental nucleusPptgEng
Pedunculopontine tegmental nucleusPPTgEng
Nucleus pedunculopontinus Lat
 PPTnEng
Pedunculopontine tegmental n.  
Nucleus reticularis pedunculopontinus tegmentalis Lat
Cholinergic cell group 5 of MesulamCh5Eng
Pedunculopontine tegmental nucleusPPTgEng
Peduncular pontine nucleus  
Mesopontine tegmental anesthesia areaMPTAEng
Nucleus tegmentalis pedunculopontinusPPTgEng
Pedunculopontine tegmental Eng
Nucleus tegmenti pedunculopontinusPPNLat
Pedunculopontine nucleus  
Nucleus tegmenti pedunculopontinusTPPEng
 pptEng
Pontine peripeduncular tegmental nucleusPPT 

SubregionsSide
Pedunculopontine tegmental nucleus caudal partright
Pedunculopontine tegmental nucleus caudolateral partright
Pedunculopontine tegmental nucleus dorsal partright
Pedunculopontine tegmental nucleus lateral partright
Pedunculopontine tegmental nucleus medial partright
Pedunculopontine tegmental nucleus mid levelright
Pedunculopontine tegmental nucleus pars compactaright
Pedunculopontine tegmental nucleus pars dissipataright
Pedunculopontine tegmental nucleus rostral partright
Pedunculopontine tegmental nucleus ventral partright
Rostrocaudal extent of the pedunculopontine tegmental nucleusright
Dorsocaudal part of the pedunculopontine tegmental nucleusright
Pedunculopontine tegmental nucleus subnucleus compactusright
Pedunculopontine tegmental nucleus anterior partright
Dorsolateral pedunculopontine tegmental nucleusright
Ventromedial pedunculopontine tegmental nucleusright
Pedunculopontine tegmental nucleus caudoventral partright
Pedunculopontine tegmental nucleus type 1 neuronsright
Pedunculopontine tegmental nucleus type 2 neuronsright

Output to

NameSideAbbr.WeightDetails
Nuclei of the lateral lemniscuscontraNLL1
Periaqueductal graycontraPAG-0.5
Ventrolateral periaqueductal graycontraVLPAG1.5
Inferior colliculuscontraICOL2
Superior colliculuscontraSC1
Superior colliculus deep white layercontraSAP-0.5
Superior colliculus intermediate layerscontraSCi-0.5
Intermediate white layer of the superior colliculuscontraInWh-0.5
Deep white layer of the superior colliculuscontraDpWh-0.5
Central tegmental field dorsal partcontraTGACd1
Substantia nigra A9contraSN1.5
Substantia nigra compact partcontraSNC0.5
Substantia nigra reticular partcontraSNR0.5
Ventral tegmental area A10contraVTA1.5
Ventral tegmental area A10 lateral partcontraVTAL3
Ventral tegmental area A10 middle thirdcontraVTAmit-0.5
Peripeduncular areacontraPPA0
Middle part of the retrorubral fieldcontraRRmi1.5
Ventrolateral tegmental areacontraVLTg1
Laterodorsal tegmental nucleuscontraLDTg2
Ventral tegmental nucleuscontraVTg1
Dorsal tegmental nucleuscontraDTg1
Mesencephalic locomotor regioncontraMLR1
Pedunculopontine tegmental nucleuscontraPPTg3
Pedunculopontine tegmental nucleus pars dissipatacontraPPNd-0.5
Rostral mesopontine tegmental anesthesia areacontraRMTGA3
Mid-level mesopontine tegmental anesthesia areacontraMLMTGA3
Cerebellar cortexcontraCERC0
Cerebellar nucleicontraDCeN0
Locus coeruleuscontraLC1
Reticulotegmental nucleus of the ponscontraRtTg-0.5
Pontine nucleicontraPn-0.5
Prepositus nucleuscontraPr1
Reticular systemcontraRF-0.5
Magnocellular reticular nucleuscontraNRMC2
Medial reticular formationcontraRFm1.5
Mesopontine reticular formationcontraMPRF1
Pontine reticular nucleuscontraPRN2
Pontine reticular nucleus dorsal partcontraPRNd2
Pontine reticular nucleus oral partcontraPnO2
Ventrolateral pontine reticular formationcontravlPRF1
Sublaterodorsal areacontraSLaDo2
Pontine reticular nucleus caudal partcontraPNC2
Parabrachial nucleuscontraPB1.5
Lateral parabrachial nucleuscontraLPB1
Gigantocellular reticular nucleuscontraGi3
Gigantocellular reticular nucleus alpha partcontraGiA3
Gigantocellular reticular nucleus ventral partcontraGiV3
Lateral reticular nucleuscontraLRt-0.5
Medullary reticular nucleuscontraMdD-0.5
Parvicellular reticular nucleus lateral partcontraPCRtl2
Subcoeruleus nucleuscontraSubC2
Ambiguus nucleuscontraAmb2
Facial nucleuscontra73
Facial nucleus lateral subnucleuscontra7L2
Hypoglossal nucleuscontra12S1
Motor trigeminal nucleuscontraMo52
Principal sensory trigeminal nucleuscontraPr52
Spinal trigeminal nucleuscontraSp5nc2
Ventral whisker responsive region of the spinal trigeminal nucleus interpolar partcontraSp5Ivwr2.5
Vestibular nucleicontraVnc2
Nucleus of the solitary tractcontraSol1
Dorsal motor nucleus of vaguscontra101
Dorsal raphe nucleuscontraDR1.5
Dorsal raphe nucleus dorsal corecontraDRDc3
Median raphe nucleuscontraMnR1
Raphe magnus nucleuscontraRMg3
Rostral ventrolateral medullacontraRVLM2
Dorsal column nucleicontraDCN-0.5
Inferior olivecontraIO-0.5
Paragigantocellular reticular nucleuscontraPGi2
Lateral paragigantocellular nucleuscontraLPGi1.5
Retrofacial nucleuscontraRFN1
Caudal ventral medulla oblongatacontraCVMeO-0.5
Basal nucleus MeynertcontraB-0.5
Substantia innominatacontraSI-0.5
Medial preoptic nucleuscontraMPO-0.5
HypothalamuscontraHYPO0.5
Lateral hypothalamic areacontraLH2
A8 dopamine cells retrorubral group lateral partcontraRRFL1.5
A8 dopamine cells retrorubral group medial partcontraRRFm1.5
ThalamuscontraT1.5
Anterior group of the dorsal thalamuscontraATN-0.5
Anterodorsal thalamic nucleuscontraAD2
Anteroventral thalamic nucleuscontraAV2
Central medial thalamic nucleuscontraCM1
Parafascicular thalamic nucleuscontraPF-0.5
Posterior thalamic nuclear groupcontraPo3
Medial group of the dorsal thalamuscontraMED1
Ventral posteromedial thalamic nucleus caudal partcontraVPMC1
Parafascicular nucleuscontraPFa2.5
Reticular thalamic nucleuscontraRt1
Subparafascicular thalamic nucleus caudal partcontraSPFc0.5
Subparafascicular thalamic nucleus medial partcontraSPFme0.5
Subparafascicular thalamic nucleus rostral partcontraSPFr0.5
Zona incertacontraZI2
HabenulacontraHAB1
Pretectal regioncontraPRT1
Anterior pretectal nucleuscontraAPT-0.5
Ventromedial crossingcontravmc-2
Basolateral amygdaloid nucleuscontraBL2
Basomedial amygdaloid nucleuscontraBM1
Central amygdaloid nucleuscontraCe1
Globus palliduscontraGP1
Medial globus palliduscontraMGP1.5
Lateral accumbens shellcontraAcbShl1
Medial accumbens shellcontraAcbShm1
Caudate putamencontraCPu1.5
Lateral striatumcontraCPul0.5
Subthalamic nucleuscontraSTh3
Subthalamic nucleus middle partcontraSThm1
Cerebral cortexcontraCEC-0.5
SubiculumcontraS2
PresubiculumcontraPrS2
Retrosplenial agranular cortexcontraRSA2
Medial agranular prefrontal cortexcontraAGm2
Intracommissural nucleus of the posterior commissurecontraicPC-0.5
Lateral geniculate complexcontraLG1
Gray matter of spinal cordcontraGMES-0.5
Intermediate zone of spinal cordcontraIzMES3
Nucleus propiuscontraMESLnp2
Spinal cord lamina 3contraMESL31
Spinal cord lamina 1contraMESL11
Spinal cord lamina 2contraMESL21
Cervical segmentscontraCSeg0
Prebrachial segmentscontraPSeg0.5
Cervical segment 1contraCS11
Dorsal horn C1contraDHC11
Spinal cord layer 5 C1contraSCL5C13
Spinal cord layer 6 C1contraSCL6C13
Spinal cord layer 3 C1contraSCL3C13
Spinal cord layer 4 C1contraSCL4C13
Spinal cord layer 1 C1contraSCL1C11
Spinal cord layer 2 C1contraSCL2C13
Ventral horn C1contraVHC13
Cervical segment 2contraCS21
Dorsal horn C2contraDHC21
Spinal cord layer 5 C2contraSCL5C23
Spinal cord layer 6 C2contraSCL6C23
Spinal cord layer 3 C2contraSCL3C23
Spinal cord layer 4 C2contraSCL4C23
Spinal cord layer 1 C2contraSCL1C21
Spinal cord layer 2 C2contraSCL2C23
Ventral horn C2contraVHC23
Cervical segment 3contraCS31
Dorsal horn C3contraDHC31
Spinal cord layer 5 C3contraSCL5C33
Spinal cord layer 6 C3contraSCL6C33
Spinal cord layer 3 C3contraSCL3C33
Spinal cord layer 4 C3contraSCL4C33
Spinal cord layer 1 C3contraSCL1C31
Spinal cord layer 2 C3contraSCL2C33
Ventral horn C3contraVHC33
Cervical segment 4contraCS41
Dorsal horn C4contraDHC41
Spinal cord layer 5 C4contraSCL5C43
Spinal cord layer 6 C4contraSCL6C43
Spinal cord layer 3 C4contraSCL3C43
Spinal cord layer 4 C4contraSCL4C43
Spinal cord layer 1 C4contraSCL1C41
Spinal cord layer 2 C4contraSCL2C43
Ventral horn C4contraVHC43
Cervical segment 5contraCS51
Dorsal horn C5contraDHC51
Spinal cord layer 5 C5contraSCL5C53
Spinal cord layer 6 C5contraSCL6C53
Spinal cord layer 3 C5contraSCL3C53
Spinal cord layer 4 C5contraSCL4C53
Spinal cord layer 1 C5contraSCL1C51
Spinal cord layer 2 C5contraSCL2C53
Ventral horn C5contraVHC53
Cervical segment 6contraCS61
Dorsal horn C6contraDHC61
Spinal cord layer 5 C6contraSCL5C63
Spinal cord layer 6 C6contraSCL6C63
Spinal cord layer 3 C6contraSCL3C63
Spinal cord layer 4 C6contraSCL4C63
Spinal cord layer 1 C6contraSCL1C61
Spinal cord layer 2 C6contraSCL2C63
Ventral horn C6contraVHC63
Cervical segment 7contraCS71
Dorsal horn C7contraDHC71
Spinal cord layer 5 C7contraSCL5C73
Spinal cord layer 6 C7contraSCL6C73
Spinal cord layer 3 C7contraSCL3C73
Spinal cord layer 4 C7contraSCL4C73
Spinal cord layer 1 C7contraSCL1C71
Spinal cord layer 2 C7contraSCL2C73
Ventral horn C7contraVHC73
Cervical segment 8contraCS81
Dorsal horn C8contraDHC81
Spinal cord layer 5 C8contraSCL5C83
Spinal cord layer 6 C8contraSCL6C83
Spinal cord layer 3 C8contraSCL3C83
Spinal cord layer 4 C8contraSCL4C83
Spinal cord layer 1 C8contraSCL1C81
Spinal cord layer 2 C8contraSCL2C83
Ventral horn C8contraVHC83
Cervical spinal cord layer 10contraCSegL103
Thoracal segment 1contraT1-0.5
Dorsal horn T1contraDHT11
Spinal cord layer 5 T1contraSCL5T13
Spinal cord layer 6 T1contraSCL6T13
Spinal cord layer 3 T1contraSCL3T13
Spinal cord layer 4 T1contraSCL4T13
Spinal cord layer 1 T1contraSCL1T13
Spinal cord layer 2 T1contraSCL2T13
Ventral horn T1contraVHT13
Dorsal horn T2contraDHT21
Spinal cord layer 5 T2contraSCL5T23
Spinal cord layer 6 T2contraSCL6T23
Spinal cord layer 3 T2contraSCL3T23
Spinal cord layer 4 T2contraSCL4T23
Spinal cord layer 1 T2contraSCL1T23
Spinal cord layer 2 T2contraSCL2T23
Ventral horn T2contraVHT23
Dorsal horn T3contraDHT31
Spinal cord layer 5 T3contraSCL5T33
Spinal cord layer 6 T3contraSCL6T33
Spinal cord layer 3 T3contraSCL3T33
Spinal cord layer 4 T3contraSCL4T33
Spinal cord layer 1 T3contraSCL1T33
Spinal cord layer 2 T3contraSCL2T33
Ventral horn T3contraVHT33
Dorsal horn T4contraDHT41
Spinal cord layer 5 T4contraSCL5T43
Spinal cord layer 6 T4contraSCL6T43
Spinal cord layer 3 T4contraSCL3T43
Spinal cord layer 4 T4contraSCL4T43
Spinal cord layer 1 T4contraSCL1T43
Spinal cord layer 2 T4contraSCL2T43
Ventral horn T4contraVHT43
Dorsal horn T5contraDHT51
Spinal cord layer 5 T5contraSCL5T53
Spinal cord layer 6 T5contraSCL6T53
Spinal cord layer 3 T5contraSCL3T53
Spinal cord layer 4 T5contraSCL4T53
Spinal cord layer 1 T5contraSCL1T53
Spinal cord layer 2 T5contraSCL2T53
Ventral horn T5contraVHT53
Dorsal horn T6contraDHT61
Spinal cord layer 5 T6contraSCL5T63
Spinal cord layer 6 T6contraSCL6T63
Spinal cord layer 3 T6contraSCL3T63
Spinal cord layer 4 T6contraSCL4T63
Spinal cord layer 1 T6contraSCL1T63
Spinal cord layer 2 T6contraSCL2T63
Ventral horn T6contraVHT63
Dorsal horn T7contraDHT71
Spinal cord layer 5 T7contraSCL5T73
Spinal cord layer 6 T7contraSCL6T73
Spinal cord layer 3 T7contraSCL3T73
Spinal cord layer 4 T7contraSCL4T73
Spinal cord layer 1 T7contraSCL1T73
Spinal cord layer 2 T7contraSCL2T73
Ventral horn T7contraVHT73
Dorsal horn T8contraDHT81
Spinal cord layer 5 T8contraSCL5T83
Spinal cord layer 6 T8contraSCL6T83
Spinal cord layer 3 T8contraSCL3T83
Spinal cord layer 4 T8contraSCL4T83
Spinal cord layer 1 T8contraSCL1T83
Spinal cord layer 2 T8contraSCL2T83
Ventral horn T8contraVHT83
Dorsal horn T9contraDHT91
Spinal cord layer 5 T9contraSCL5T93
Spinal cord layer 6 T9contraSCL6T93
Spinal cord layer 3 T9contraSCL3T93
Spinal cord layer 4 T9contraSCL4T93
Spinal cord layer 1 T9contraSCL1T93
Spinal cord layer 2 T9contraSCL2T93
Ventral horn T9contraVHT93
Dorsal horn T10contraDHT101
Spinal cord layer 5 T10contraSCL5T103
Spinal cord layer 6 T10contraSCL6T103
Spinal cord layer 3 T10contraSCL3T103
Spinal cord layer 4 T10contraSCL4T103
Spinal cord layer 1 T10contraSCL1T103
Spinal cord layer 2 T10contraSCL2T103
Ventral horn T10contraVHT103
Dorsal horn T11contraDHT111
Spinal cord layer 5 T11contraSCL5T113
Spinal cord layer 6 T11contraSCL6T113
Spinal cord layer 3 T11contraSCL3T113
Spinal cord layer 4 T11contraSCL4T113
Spinal cord layer 1 T11contraSCL1T113
Spinal cord layer 2 T11contraSCL2T113
Ventral horn T11contraVHT113
Dorsal horn T12contraDHT121
Spinal cord layer 5 T12contraSCL5T123
Spinal cord layer 6 T12contraSCL6T123
Spinal cord layer 3 T12contraSCL3T123
Spinal cord layer 4 T12contraSCL4T123
Spinal cord layer 1 T12contraSCL1T123
Spinal cord layer 2 T12contraSCL2T123
Ventral horn T12contraVHT123
Dorsal horn T13contraDHT131
Spinal cord layer 5 T13contraSCL5T133
Spinal cord layer 6 T13contraSCL6T133
Spinal cord layer 3 T13contraSCL3T133
Spinal cord layer 4 T13contraSCL4T133
Spinal cord layer 1 T13contraSCL1T133
Spinal cord layer 2 T13contraSCL2T133
Ventral horn T13contraVHT133
Lumbar segment 1contraL12
Spinal cord layers L1contraSCLL1-0.5
Dorsal horn L1contraDHL11
Spinal cord layer 5 L1contraSCL5L13
Spinal cord layer 6 L1contraSCL6L13
Spinal cord layer 3 L1contraSCL3L13
Spinal cord layer 4 L1contraSCL4L13
Spinal cord layer 1 L1contraSCL1L13
Spinal cord layer 2 L1contraSCL2L13
Ventral horn L1contraVHL13
Lumbar segment 2contraL22
Spinal cord layers L2contraSCLL2-0.5
Dorsal horn L2contraDHL21
Spinal cord layer 5 L2contraSCL5L23
Spinal cord layer 6 L2contraSCL6L23
Spinal cord layer 3 L2contraSCL3L23
Spinal cord layer 4 L2contraSCL4L23
Spinal cord layer 1 L2contraSCL1L23
Spinal cord layer 2 L2contraSCL2L23
Ventral horn L2contraVHL23
Lumbar segment 3contraL32
Dorsal horn L3contraDHL31
Spinal cord layer 5 L3contraSCL5L33
Spinal cord layer 6 L3contraSCL6L33
Spinal cord layer 3 L3contraSCL3L33
Spinal cord layer 4 L3contraSCL4L33
Spinal cord layer 1 L3contraSCL1L33
Spinal cord layer 2 L3contraSCL2L33
Ventral horn L3contraVHL33
Lumbar segment 4contraL42
Dorsal horn L4contraDHL41
Spinal cord layer 5 L4contraSCL5L43
Spinal cord layer 6 L4contraSCL6L43
Spinal cord layer 3 L4contraSCL3L43
Spinal cord layer 4 L4contraSCL4L43
Spinal cord layer 1 L4contraSCL1L43
Spinal cord layer 2 L4contraSCL2L43
Ventral horn L4contraVHL43
Lumbar segment 5contraL52
Dorsal horn L5contraDHL51
Spinal cord layer 5 L5contraSCL5L53
Spinal cord layer 6 L5contraSCL6L53
Spinal cord layer 3 L5contraSCL3L53
Spinal cord layer 4 L5contraSCL4L53
Spinal cord layer 1 L5contraSCL1L53
Spinal cord layer 2 L5contraSCL2L53
Ventral horn L5contraVHL53
Lumbar segment 6contraL62
Dorsal horn L6contraDHL61
Spinal cord layer 5 L6contraSCL5L63
Spinal cord layer 6 L6contraSCL6L63
Spinal cord layer 3 L6contraSCL3L63
Spinal cord layer 4 L6contraSCL4L63
Spinal cord layer 1 L6contraSCL1L63
Spinal cord layer 2 L6contraSCL2L63
Ventral horn L6contraVHL63
Dorsal horn S1contraDHS11
Ventral horn S1contraVHSa13
Dorsal horn S2contraDHS21
Ventral horn S2contraVHSa23
Dorsal horn S3contraDHS31
Ventral horn S3contraVHSa33
Dorsal horn S4contraDHS41
Ventral horn S4contraVHSa43
Spinal gray mattercontraSGM-0.5
Medial longitudinal fasciculusipsimlf-0.5
Nuclei of the lateral lemniscusipsiNLL1
Paralemniscal nucleusipsiPL-0.5
Nucleus of DarkschewitschipsiDk0
Oculomotor nucleusipsi31
Extraocular motor nucleiipsiexOCS1
Periaqueductal grayipsiPAG3
Dorsolateral periaqueductal grayipsiDLPAG-0.5
Periaqueductal gray rostral partipsiPAGR3
Ventrolateral periaqueductal grayipsiVLPAG3
Red nucleusipsiR-2
Prerubral fieldipsiPR-0.5
TectumipsiTEC-0.5
Inferior colliculusipsiICOL2
Superior colliculusipsiSC2
Superior colliculus deep white layeripsiSAP-0.5
Superior colliculus superficial layersipsiSCs-0.5
Superior colliculus intermediate layersipsiSCi-0.5
Intermediate white layer of the superior colliculusipsiInWh-0.5
Superior colliculus intermediate layers lower part of the inferior portionipsiSCiLi-2
Deep white layer of the superior colliculusipsiDpWh-0.5
Tegmental areaipsiTGA-0.5
Central tegmental field dorsal partipsiTGACd1
Central tegmental tractipsictg0.5
Microcellular tegmental nucleusipsiMiTg-0.5
Peduncular pontine nucleus central partipsiPPNc-0.5
Rostromedial tegmental nucleusipsiRMTg1
Substantia nigra A9ipsiSN3
Middle portion of the substantia nigraipsiSNmi-0.5
Substantia nigra compact partipsiSNC3
Substantia nigra compact part upper borderipsiSNCub-0.5
Substantia nigra lateral partipsiSNL1
Substantia nigra medial partipsiSNM-0.5
Substantia nigra reticular partipsiSNR2
Ventral tegmental area A10ipsiVTA3
Ventral tegmental area A10 lateral partipsiVTAL3
Ventral tegmental area A10 middle thirdipsiVTAmit-0.5
Peripeduncular areaipsiPPA0
Retrorubral nucleusipsiRR1
Middle part of the retrorubral fieldipsiRRmi3
Ventrolateral tegmental areaipsiVLTg1
Lateral tegmental areaipsiLTGA-0.5
Laterodorsal tegmental nucleusipsiLDTg2
Upper part of the laterodorsal tegmental nucleusipsiLDTgU-0.5
Ventral tegmental nucleusipsiVTg2
Dorsal tegmental nucleusipsiDTg1.5
Dorsal tegmental nucleus lateral partipsiDLTN-0.5
Mesencephalic locomotor regionipsiMLR3
Pedunculopontine tegmental nucleusipsiPPTg3
Pedunculopontine tegmental nucleus caudal partipsiPPTgC-0.5
Pedunculopontine tegmental nucleus medial partipsiPPTgM-0.5
Pedunculopontine tegmental nucleus pars dissipataipsiPPNd-0.5
Rostrocaudal extent of the pedunculopontine tegmental nucleusipsiPPTgRC-0.5
Caudal mesopontine tegmental anesthesia areaipsiCMTGA2
Pontine wave generation siteipsiPWGS-0.5
Edinger Westphal nucleusipsiEW3
Cerebellar cortexipsiCERC0
Ansiform lobule crus 2bipsiCrus2b-1
Paramedian lobuleipsiPM-1
Cerebellar lobule 7ipsiCERL7-0.5
Cerebellar nucleiipsiDCeN0
Deep cerebellar nucleiipsiDNC1
Medial cerebellar nucleus rostral partipsiMedR1
Anterolateral curve of the superior cerebellar peduncle brachium conjunctivumipsiaLscp-0.5
PonsipsiP1
A5 noradrenaline cellsipsiA5-0.5
A7 noradrenaline cellsipsiA73
Barringtons nucleusipsiBar-0.5
Locus coeruleusipsiLC3
Reticulotegmental nucleus of the ponsipsiRtTg-0.5
Pontine nucleiipsiPn-0.5
Prepositus nucleusipsiPr1
Probst's tract medullaipsiprbm-2
Ventromedial branch of Probst's bundleipsivmbprb-2
Reticular systemipsiRF-0.5
Intermediate reticular nucleusipsiIRt1
Magnocellular reticular nucleusipsiNRMC3
Medial reticular formationipsiRFm3
Rostroventrolateral reticular nucleusipsiRVL-0.5
Ventrolateral reticular formationipsiVLRF1
Ventromedial reticular formationipsiVMRF2
Mesopontine reticular formationipsiMPRF3
Pontine reticular nucleusipsiPRN3
Pontine reticular nucleus central partipsiNRTPc-2
Pontine reticular nucleus dorsal partipsiPRNd3
Pontine reticular nucleus oral partipsiPnO3
Pontine reticular nucleus ventral partipsiPnV-0.5
Ventrolateral pontine reticular formationipsivlPRF1
Sublaterodorsal areaipsiSLaDo3
Pontine reticular nucleus caudal partipsiPNC3
Parabrachial nucleusipsiPB3
Koelliker Fuse nucleusipsiKF3
Lateral parabrachial nucleusipsiLPB0.5
Lateral parabrachial nucleus crescent partipsiLPBCr3
Lateral parabrachial nucleus internal partipsiLPBI3
Parabrachial nucleus dorsal partipsiPBD-0.5
Dorsal lateral parabrachial nucleusipsiPBDoL3
Parabrachial nucleus dorsolateral partipsiPBDL-0.5
Parabrachial nucleus external divison lateral partipsiPBeDL1
Parabrachial nucleus medialipsiPBnMe3
Medial parabrachial nucleus external partipsiMPBE3
Parabrachial nucleus ventral partipsiPBV-0.5
Parabrachial nucleus ventrolateral partipsiPBveLa3
Centrolateral parabrachial nucleusipsiCEPB3
Gigantocellular reticular nucleusipsiGi3
Gigantocellular reticular nucleus alpha partipsiGiA3
Gigantocellular reticular nucleus medial partipsiGiM1
Gigantocellular reticular nucleus ventral partipsiGiV3
Lateral reticular nucleusipsiLRt2
Medullary reticular nucleusipsiMdD-0.5
Medial subnucleus reticularis ventralisipsiMSRV1
Medullary reticular nucleus lateral partipsiMdL1
Parvicellular reticular nucleusipsiPCRt1
Parvicellular reticular nucleus alpha partipsiPCRtA1
Parvicellular reticular nucleus lateral partipsiPCRtl3
Trapezoid bodyipsitz0
Subcoeruleus nucleusipsiSubC3
MyelencephalonipsiMYC-0.5
Ambiguus nucleusipsiAmb3
Facial nucleusipsi73
Facial nucleus lateral subnucleusipsi7L3
Facial nucleus medial partipsi7M0
Hypoglossal nucleusipsi12S3
Motor trigeminal nucleusipsiMo53
Principal sensory trigeminal nucleusipsiPr52
Spinal trigeminal nucleusipsiSp5nc3
Ventral whisker responsive region of the spinal trigeminal nucleus interpolar partipsiSp5Ivwr2.5
Medial edge of the trigeminal complexipsi5SME-2
Trochlear nucleusipsi41
Vestibulochochlear systemipsi8S1
Vestibular nucleiipsiVnc3
Superior vestibular nucleusipsiSuVe1
Medial vestibular nucleusipsiMVe1
Lateral vestibular nucleusipsiLVe1
Nucleus of the solitary tractipsiSol1
Dorsal motor nucleus of vagusipsi101
Dorsal raphe nucleusipsiDR3
Dorsal raphe nucleus dorsal coreipsiDRDc3
Median raphe nucleusipsiMnR2
Raphe magnus nucleusipsiRMg3
Raphe magnus nucleus caudal partipsiRMgc0.5
Raphe magnus nucleus rostral partipsiRMgR0.5
Raphe pallidus nucleusipsiRPa0.5
Paramedial raphe nucleusipsiRApam-0.5
Rostral ventrolateral medullaipsiRVLM2
Dorsal column nucleiipsiDCN-0.5
Inferior oliveipsiIO-0.5
Caudal pole of the inferior olivary complexipsiIOCaP1
Superior oliveipsiSuOLi1
Paragigantocellular reticular nucleusipsiPGi3
Dorsal paragigantocellular nucleusipsiDPGi3
Lateral paragigantocellular nucleusipsiLPGi3
Retrofacial nucleusipsiRFN1
Retrotrapezoid nucleusipsiRTN1
Rostromedial medulla oblongataipsirmMeOb3
Caudal ventral medulla oblongataipsiCVMeO-0.5
Rostral part of the ventromedial medulla oblongataipsiRMeObvm3
Medullary motor nucleiipsiMeObMo1
Ventromedial medullaipsiVMMeOb0.5
Basal forebrainipsiBAF3
Endopiriform systemipsiEnN-0.5
Diagonal band of BrocaipsiDBB-0.5
Nucleus of the horizontal limb of the diagonal bandipsiHDB3
Nucleus of the vertical limb of the diagonal bandipsiVDB1
Medial septal nucleusipsiMS2
Basal nucleus MeynertipsiB3
Substantia innominataipsiSI3
Preoptic regionipsiPREO2
Magnocellular preoptic nucleusipsiMCPO4
Medial preoptic nucleusipsiMPO1
HypothalamusipsiHYPO2
Lateral hypothalamic areaipsiLH3
Lateral hypothalamic area medial partipsiLHAm2
Lateral hypothalamic area perifornical partipsiPFx1
Lateral hypothalamic area posterior partipsiLHAp3
Medial division of the hypothalamusipsiMdH2
Posterior hypothalamic areaipsiPHA3
Mediobasal hypothalamus anterior partipsiMeHypoAnt0.5
Mediobasal hypothalamus posterior partipsiMeHypoP1
Paraventricular hypothalamic nucleus anterior parvicellular subdivisionipsiaPavPo1
Suprachiasmatic nucleusipsiSCh3
Rostral part of suprachiasmatic nucleus ventrolateral partipsiSCnVLR2
Supraoptic decussationipsisox-0.5
Ventral hypothalamic regionipsiVHR-0.5
A8 dopamine cells retrorubral groupipsiRRF0.5
A8 dopamine cells retrorubral group lateral partipsiRRFL3
A8 dopamine cells retrorubral group medial partipsiRRFm3
Perifornical nucleusipsiPeF-0.5
Subincertal nucleusipsiSubI1
ThalamusipsiT3
Dorsal thalamusipsiDOR4
Anterior group of the dorsal thalamusipsiATN4
Anterodorsal thalamic nucleusipsiAD2
Anteromedial thalamic nucleusipsiAM-0.5
Anteroventral thalamic nucleusipsiAV2
Anteroventral thalamic nucleus medial part ventral partipsiAVmv1
Dorsal half of rostral part of posterior subdivision of anteroventral thalamic nucleusipsiAVPRD1
Interoanteromedial thalamic nucleusipsiIAM-0.5
Central medial thalamic nucleusipsiCM3
Centrolateral thalamic nucleusipsiCL3
Paracentral thalamic nucleusipsiPC2
Paracentral thalamic nucleus caudal partipsiPC-c3
Paracentral thalamic nucleus rostral partipsiPC-r2
Parafascicular thalamic nucleusipsiPF2
Parafascicular thalamic nucleus lateral partipsiPFL4
Parafascicular thalamic nucleus medial partipsiPFM3
Rhomboid thalamic nucleusipsiRh3
Lateral group of the dorsal thalamusipsiLAT-0.5
Posterior thalamic nuclear groupipsiPo3
Posterior thalamic nuclear group dorsocaudal partipsiPoDC2
Posterior thalamic nuclear group medial partipsiPoMe-0.5
Medial group of the dorsal thalamusipsiMED2
Mediodorsal thalamic nucleusipsiMD1
Intermediodorsal thalamic nucleusipsiIMD1
Mediodorsal thalamic nucleus central partipsiMDC1
Mediodorsal thalamic nucleus lateral partipsiMDL1
Mediodorsal thalamic nucleus medial partipsiMDM-0.5
Submedius thalamic nucleusipsiSub1
Midline group of the dorsal thalamusipsiMTN0
Paratenial thalamic nucleusipsiPT0
Paraventricular thalamic nucleusipsiPV2
Paraventricular thalamic nucleus anterior partipsiPVA4
Paraventricular thalamic nucleus medial partipsiPVM2
Paraventricular thalamic nucleus posterior partipsiPVP3
Reuniens thalamic nucleusipsiRe3
Reuniens thalamic nucleus caudomedial divisionipsiRecm3
Reunienes thalamic nucleus rostromedial divisionipsiRerm2
Reuniens thalamic nucleus rostrolateral divisionipsiRerl2
Ventrolateral thalamic nucleusipsiVL3
Ventral posterior thalamic nucleus parvicellular partipsiVPPC2
Ventral posterolateral thalamic nucleusipsiVPL3
Ventral posterolateral thalamic nucleus posterior partipsiVPLP2
Ventral posteromedial thalamic nucleusipsiVPM3
Medial part of ventral posteromedial thalamic nucleusipsiVPMm2
Ventromedial thalamic nucleusipsiVM2
Ventromedial thalamic nucleus caudal partipsiVMc3
Intralaminar nucleiipsiILN2
Centrolateral intralaminar nucleusipsiCLILN-0.5
Parafascicular nucleusipsiPFa3
Lateral thalamic nuclear groupipsiLTNG4
Lateral posterior thalamic nucleusipsiLP2
Laterodorsal thalamic nucleusipsiLD0.5
Ventrolateral part of the lateral thalamic nuclear groupipsiVLLTNG-0.5
Ventroposterior lateral thalamic nucleusipsiVPLTNG-0.5
Oval paracentral thalamic nucleusipsiOPC2
Posterior groupipsiPTG0.5
Ventral thalamusipsiVNT2
Reticular thalamic nucleusipsiRt4
Reticular thalamic nucleus caudal partipsiRtc-0.5
Reticular thalamic nucleus intermediate partipsiRti-10
Reticular thalamic nucleus lateral partipsiRtL2
Reticular thalamic nucleus rostral partipsiRtr1
Caudal part of the caudorostral part of the reticular thalamic nucleusipsiRtccr-0.5
Subparafascicular thalamic nucleus caudal partipsiSPFc2
Subparafascicular thalamic nucleus medial partipsiSPFme1
Subparafascicular thalamic nucleus rostral partipsiSPFr1
Zona incertaipsiZI3
Zona incerta caudal partipsiZIC1
Zona incerta dorsal partipsiZID-0.5
Zona incerta lateral partipsiZIL-0.5
Zona incerta ventral partipsiZIV2
Optic chiasmipsiox-2
HabenulaipsiHAB2
Lateral habenular nucleusipsiLHb1
Pretectal regionipsiPRT2
Anterior pretectal nucleusipsiAPT-0.5
Anterior pretectal nucleus lateral partipsiAPTL-0.5
Anterior pretectal nucleus anterior partipsiAPTA-0.5
Anterior pretectal nucleus posterior partipsiAPTP-0.5
Accessory optic tractipsiaopt-0.5
Lateral lemniscusipsill-0.5
Medial lemniscusipsiml2.5
Dorsal columnipsidoco-2
Ventral tegmental pathwayipsivtp-0.5
Medial reticulospinal pathwayipsimrsp-2
Lateral terminal nucleus of the accessory optic tractipsiLTeN-0.5
Medial terminal nucleus of the accessory optic tractipsiMT2
Amygdaloid complexipsiAC-0.5
Basal nucleusipsiBnc2
Basolateral amygdaloid nucleusipsiBL3
Basomedial amygdaloid nucleusipsiBM2
Bed nucleus of the stria terminalisipsiBST2
Central amygdaloid nucleusipsiCe2
Interstitial nucleus of the posterior limb of the anterior commissure medial partipsiIPACM2
Anterior amygdaloid areaipsiAA2
Medial amygdaloid nucleusipsiMe2
Globus pallidusipsiGP3
Caudal globus pallidusipsiGPc2
Dorsal globus pallidusipsiDGP1
Lateral globus pallidusipsiLGP2
Medial globus pallidusipsiMGP3
Medial globus pallidus rostral partipsiMGPr1
Ventral pallidumipsiVP3
Accumbens nucleusipsiAc2
Accumbens nucleus coreipsiAcbC1
Lateral accumbens shellipsiAcbShl1
Medial accumbens shellipsiAcbShm1.5
Caudate putamenipsiCPu2
Lateral striatumipsiCPul2
Subthalamic nucleusipsiSTh3
Subthalamic nucleus dorsomedial partipsiSThdm1
Subthalamic nucleus middle partipsiSThm2
Cerebral cortexipsiCEC1
HippocampusipsiHIPP1
SubiculumipsiS2
PresubiculumipsiPrS2
Retrosplenial agranular cortexipsiRSA2
Anterior cingulate cortexipsiACC2
Cingulate cortex area 1ipsiCg12
Prelimbic cortexipsiPrL2
Frontal cortex area 2ipsiFr22
Anterior insular cortexipsiICXa2
Prefrontal cortexipsiPFC1
Lateral agranular prefrontal cortexipsiAGl1
Medial prefrontal cortexipsimPFC2
Medial agranular prefrontal cortexipsiAGm3
Primary visual cortexipsiV1-0.5
Medial orbital cortexipsiMO2
Intermediate magnocellular nucleus of the posterior commissureipsiiMCPC-0.5
Dorsal portion of the posterior commissureipsipcD-2
Intracommissural nucleus of the posterior commissureipsiicPC-0.5
Geniculate bodyipsiGB-0.5
Dorsal geniculate nucleus lateral partipsiDLGl-0.5
Dorsal geniculate nucleus lateral part posteromedial borderipsiDLGlpm-0.5
Lateral geniculate complexipsiLG2
Ventral lateral geniculate nucleusipsiVLG-0.5
Ventral lateral geniculate nucleus lateral partipsiVLGl-0.5
Ventral lateral geniculate nucleus medial partipsiVLGM-0.5
Ventral lateral geniculate nucleus ventral portion of the medial partipsiVLGVM-0.5
Medial geniculate nucleusipsiMG-0.5
Interpeduncular nucleusipsiIP2
Interpeduncular nucleus rostral subnucleus central partipsiIPRce0.5
Olfactory bulb A16ipsiMOB0.5
Olfactory tubercleipsiTuO0
Septal regionipsiSER2
Lateral septal nucleusipsiLS2
Spinal cordipsiMES-0.5
Nucleus propriusipsiDHMESdp1
Gray matter of spinal cordipsiGMES-0.5
Intermediate zone of spinal cordipsiIzMES3
Ventral funiculusipsivf-2
Spinoreticular tractipsisrT-2
Nucleus propiusipsiMESLnp2
Spinal cord lamina 3ipsiMESL31
Spinal cord lamina 1ipsiMESL11
Spinal cord lamina 2ipsiMESL21
Cervical segmentsipsiCSeg-0.5
Prebrachial segmentsipsiPSeg0.5
Cervical segment 1ipsiCS13
Dorsal horn C1ipsiDHC11
Spinal cord layer 5 C1ipsiSCL5C13
Spinal cord layer 6 C1ipsiSCL6C13
Spinal cord layer 3 C1ipsiSCL3C13
Spinal cord layer 4 C1ipsiSCL4C13
Spinal cord layer 1 C1ipsiSCL1C11
Spinal cord layer 2 C1ipsiSCL2C13
Ventral horn C1ipsiVHC13
Cervical segment 2ipsiCS23
Dorsal horn C2ipsiDHC21
Spinal cord layer 5 C2ipsiSCL5C23
Spinal cord layer 6 C2ipsiSCL6C23
Spinal cord layer 3 C2ipsiSCL3C23
Spinal cord layer 4 C2ipsiSCL4C23
Spinal cord layer 1 C2ipsiSCL1C21
Spinal cord layer 2 C2ipsiSCL2C23
Ventral horn C2ipsiVHC23
Cervical segment 3ipsiCS33
Dorsal horn C3ipsiDHC31
Spinal cord layer 5 C3ipsiSCL5C33
Spinal cord layer 6 C3ipsiSCL6C33
Spinal cord layer 3 C3ipsiSCL3C33
Spinal cord layer 4 C3ipsiSCL4C33
Spinal cord layer 1 C3ipsiSCL1C31
Spinal cord layer 2 C3ipsiSCL2C33
Ventral horn C3ipsiVHC33
Cervical segment 4ipsiCS43
Dorsal horn C4ipsiDHC41
Spinal cord layer 5 C4ipsiSCL5C43
Spinal cord layer 6 C4ipsiSCL6C43
Spinal cord layer 3 C4ipsiSCL3C43
Spinal cord layer 4 C4ipsiSCL4C43
Spinal cord layer 1 C4ipsiSCL1C41
Spinal cord layer 2 C4ipsiSCL2C43
Ventral horn C4ipsiVHC43
Cervical segment 5ipsiCS53
Spinal cord layers C5ipsiSCLC51
Dorsal horn C5ipsiDHC51
Spinal cord layer 5 C5ipsiSCL5C53
Spinal cord layer 6 C5ipsiSCL6C53
Spinal cord layer 3 C5ipsiSCL3C53
Spinal cord layer 4 C5ipsiSCL4C53
Spinal cord layer 1 C5ipsiSCL1C51
Spinal cord layer 2 C5ipsiSCL2C53
Ventral horn C5ipsiVHC53
Cervical segment 6ipsiCS63
Spinal cord layers C6ipsiSCLC61
Dorsal horn C6ipsiDHC61
Spinal cord layer 5 C6ipsiSCL5C63
Spinal cord layer 6 C6ipsiSCL6C63
Spinal cord layer 3 C6ipsiSCL3C63
Spinal cord layer 4 C6ipsiSCL4C63
Spinal cord layer 1 C6ipsiSCL1C61
Spinal cord layer 2 C6ipsiSCL2C63
Ventral horn C6ipsiVHC63
Cervical segment 7ipsiCS73
Dorsal horn C7ipsiDHC71
Spinal cord layer 5 C7ipsiSCL5C73
Spinal cord layer 6 C7ipsiSCL6C73
Spinal cord layer 3 C7ipsiSCL3C73
Spinal cord layer 4 C7ipsiSCL4C73
Spinal cord layer 1 C7ipsiSCL1C71
Spinal cord layer 2 C7ipsiSCL2C73
Ventral horn C7ipsiVHC73
Cervical segment 8ipsiCS83
Dorsal horn C8ipsiDHC81
Spinal cord layer 5 C8ipsiSCL5C83
Spinal cord layer 6 C8ipsiSCL6C83
Spinal cord layer 3 C8ipsiSCL3C83
Spinal cord layer 4 C8ipsiSCL4C83
Spinal cord layer 1 C8ipsiSCL1C81
Spinal cord layer 2 C8ipsiSCL2C83
Ventral horn C8ipsiVHC83
Cervical spinal cord layer 10ipsiCSegL103
Thoracal segment 1ipsiT1-0.5
Spinal cord layers T1ipsiSCLT12
Dorsal horn T1ipsiDHT11
Spinal cord layer 5 T1ipsiSCL5T13
Spinal cord layer 6 T1ipsiSCL6T13
Spinal cord layer 3 T1ipsiSCL3T13
Spinal cord layer 4 T1ipsiSCL4T13
Spinal cord layer 1 T1ipsiSCL1T13
Spinal cord layer 2 T1ipsiSCL2T13
Ventral horn T1ipsiVHT13
Spinal cord layers T2ipsiSCLT22
Dorsal horn T2ipsiDHT21
Spinal cord layer 5 T2ipsiSCL5T23
Spinal cord layer 6 T2ipsiSCL6T23
Spinal cord layer 3 T2ipsiSCL3T23
Spinal cord layer 4 T2ipsiSCL4T23
Spinal cord layer 1 T2ipsiSCL1T23
Spinal cord layer 2 T2ipsiSCL2T23
Ventral horn T2ipsiVHT23
Spinal cord layers T3ipsiSCLT32
Dorsal horn T3ipsiDHT31
Spinal cord layer 5 T3ipsiSCL5T33
Spinal cord layer 6 T3ipsiSCL6T33
Spinal cord layer 3 T3ipsiSCL3T33
Spinal cord layer 4 T3ipsiSCL4T33
Spinal cord layer 1 T3ipsiSCL1T33
Spinal cord layer 2 T3ipsiSCL2T33
Ventral horn T3ipsiVHT33
Spinal cord layers T4ipsiSCLT42
Dorsal horn T4ipsiDHT41
Spinal cord layer 5 T4ipsiSCL5T43
Spinal cord layer 6 T4ipsiSCL6T43
Spinal cord layer 3 T4ipsiSCL3T43
Spinal cord layer 4 T4ipsiSCL4T43
Spinal cord layer 1 T4ipsiSCL1T43
Spinal cord layer 2 T4ipsiSCL2T43
Ventral horn T4ipsiVHT43
Spinal cord layers T5ipsiSCLT52
Dorsal horn T5ipsiDHT51
Spinal cord layer 5 T5ipsiSCL5T53
Spinal cord layer 6 T5ipsiSCL6T53
Spinal cord layer 3 T5ipsiSCL3T53
Spinal cord layer 4 T5ipsiSCL4T53
Spinal cord layer 1 T5ipsiSCL1T53
Spinal cord layer 2 T5ipsiSCL2T53
Ventral horn T5ipsiVHT53
Spinal cord layers T6ipsiSCLT62
Dorsal horn T6ipsiDHT61
Spinal cord layer 5 T6ipsiSCL5T63
Spinal cord layer 6 T6ipsiSCL6T63
Spinal cord layer 3 T6ipsiSCL3T63
Spinal cord layer 4 T6ipsiSCL4T63
Spinal cord layer 1 T6ipsiSCL1T63
Spinal cord layer 2 T6ipsiSCL2T63
Ventral horn T6ipsiVHT63
Spinal cord layers T7ipsiSCLT72
Dorsal horn T7ipsiDHT71
Spinal cord layer 5 T7ipsiSCL5T73
Spinal cord layer 6 T7ipsiSCL6T73
Spinal cord layer 3 T7ipsiSCL3T73
Spinal cord layer 1 T7ipsiSCL1T73
Spinal cord layer 4 T7ipsiSCL4T73
Spinal cord layer 2 T7ipsiSCL2T73
Ventral horn T7ipsiVHT73
Spinal cord layers T8ipsiSCLT82
Dorsal horn T8ipsiDHT81
Spinal cord layer 5 T8ipsiSCL5T83
Spinal cord layer 6 T8ipsiSCL6T83
Spinal cord layer 3 T8ipsiSCL3T83
Spinal cord layer 4 T8ipsiSCL4T83
Spinal cord layer 1 T8ipsiSCL1T83
Spinal cord layer 2 T8ipsiSCL2T83
Ventral horn T8ipsiVHT83
Spinal cord layers T9ipsiSCLT92
Dorsal horn T9ipsiDHT91
Spinal cord layer 5 T9ipsiSCL5T93
Spinal cord layer 6 T9ipsiSCL6T93
Spinal cord layer 3 T9ipsiSCL3T93
Spinal cord layer 4 T9ipsiSCL4T93
Spinal cord layer 1 T9ipsiSCL1T93
Spinal cord layer 2 T9ipsiSCL2T93
Ventral horn T9ipsiVHT93
Spinal cord layers T10ipsiSCLT102
Dorsal horn T10ipsiDHT101
Spinal cord layer 5 T10ipsiSCL5T103
Spinal cord layer 6 T10ipsiSCL6T103
Spinal cord layer 3 T10ipsiSCL3T103
Spinal cord layer 4 T10ipsiSCL4T103
Spinal cord layer 1 T10ipsiSCL1T103
Spinal cord layer 2 T10ipsiSCL2T103
Ventral horn T10ipsiVHT103
Spinal cord layers T11ipsiSCLT112
Dorsal horn T11ipsiDHT111
Spinal cord layer 5 T11ipsiSCL5T113
Spinal cord layer 6 T11ipsiSCL6T113
Spinal cord layer 3 T11ipsiSCL3T113
Spinal cord layer 4 T11ipsiSCL4T113
Spinal cord layer 1 T11ipsiSCL1T113
Spinal cord layer 2 T11ipsiSCL2T113
Ventral horn T11ipsiVHT113
Spinal cord layers T12ipsiSCLT122
Dorsal horn T12ipsiDHT121
Spinal cord layer 5 T12ipsiSCL5T123
Spinal cord layer 6 T12ipsiSCL6T123
Spinal cord layer 3 T12ipsiSCL3T123
Spinal cord layer 4 T12ipsiSCL4T123
Spinal cord layer 1 T12ipsiSCL1T123
Spinal cord layer 2 T12ipsiSCL2T123
Ventral horn T12ipsiVHT123
Spinal cord layers T13ipsiSCLT132
Dorsal horn T13ipsiDHT131
Spinal cord layer 5 T13ipsiSCL5T133
Spinal cord layer 6 T13ipsiSCL6T133
Spinal cord layer 3 T13ipsiSCL3T133
Spinal cord layer 4 T13ipsiSCL4T133
Spinal cord layer 1 T13ipsiSCL1T133
Spinal cord layer 2 T13ipsiSCL2T133
Ventral horn T13ipsiVHT133
Intermediate lamina of the thoracic spinal cordipsiTSegim2
Lumbar segment 1ipsiL12
Spinal cord layers L1ipsiSCLL12
Dorsal horn L1ipsiDHL11
Spinal cord layer 5 L1ipsiSCL5L13
Spinal cord layer 6 L1ipsiSCL6L13
Spinal cord layer 3 L1ipsiSCL3L13
Spinal cord layer 4 L1ipsiSCL4L13
Spinal cord layer 1 L1ipsiSCL1L13
Spinal cord layer 2 L1ipsiSCL2L13
Ventral horn L1ipsiVHL13
Lumbar segment 2ipsiL22
Spinal cord layers L2ipsiSCLL22
Dorsal horn L2ipsiDHL21
Spinal cord layer 5 L2ipsiSCL5L23
Spinal cord layer 6 L2ipsiSCL6L23
Spinal cord layer 3 L2ipsiSCL3L23
Spinal cord layer 4 L2ipsiSCL4L23
Spinal cord layer 1 L2ipsiSCL1L23
Spinal cord layer 2 L2ipsiSCL2L23
Ventral horn L2ipsiVHL23
Lumbar segment 3ipsiL32
Spinal cord layers L3ipsiSCLL32
Dorsal horn L3ipsiDHL31
Spinal cord layer 5 L3ipsiSCL5L33
Spinal cord layer 6 L3ipsiSCL6L33
Spinal cord layer 3 L3ipsiSCL3L33
Spinal cord layer 4 L3ipsiSCL4L33
Spinal cord layer 1 L3ipsiSCL1L33
Spinal cord layer 2 L3ipsiSCL2L33
Ventral horn L3ipsiVHL33
Lumbar segment 4ipsiL42
Spinal cord layers L4ipsiSCLL42
Dorsal horn L4ipsiDHL41
Spinal cord layer 5 L4ipsiSCL5L43
Spinal cord layer 6 L4ipsiSCL6L43
Spinal cord layer 3 L4ipsiSCL3L43
Spinal cord layer 4 L4ipsiSCL4L43
Spinal cord layer 1 L4ipsiSCL1L43
Spinal cord layer 2 L4ipsiSCL2L43
Ventral horn L4ipsiVHL43
Lumbar segment 5ipsiL52
Spinal cord layers L5ipsiSCLL52
Dorsal horn L5ipsiDHL51
Spinal cord layer 5 L5ipsiSCL5L53
Spinal cord layer 6 L5ipsiSCL6L53
Spinal cord layer 3 L5ipsiSCL3L53
Spinal cord layer 4 L5ipsiSCL4L53
Spinal cord layer 1 L5ipsiSCL1L53
Spinal cord layer 2 L5ipsiSCL2L53
Ventral horn L5ipsiVHL53
Lumbar segment 6ipsiL62
Spinal cord layers L6ipsiSCLL62
Dorsal horn L6ipsiDHL61
Spinal cord layer 5 L6ipsiSCL5L63
Spinal cord layer 6 L6ipsiSCL6L63
Spinal cord layer 3 L6ipsiSCL3L63
Spinal cord layer 4 L6ipsiSCL4L63
Spinal cord layer 1 L6ipsiSCL1L63
Spinal cord layer 2 L6ipsiSCL2L63
Ventral horn L6ipsiVHL63
Dorsal horn S1ipsiDHS11
Ventral horn S1ipsiVHSa13
Dorsal horn S2ipsiDHS21
Ventral horn S2ipsiVHSa23
Dorsal horn S3ipsiDHS31
Ventral horn S3ipsiVHSa33
Dorsal horn S4ipsiDHS41
Ventral horn S4ipsiVHSa43
Spinal gray matteripsiSGM-0.5
Ventral horn of spinal cordipsiVHMES1
Intermediate zone of the cervical spinal cordipsiimzCSC3
Hypoglossal nervecontra12P-0.5
Hypoglossal nerveipsi12P-0.5
Ventral stomach wallcontraOrgsStomVWS-0.5
Ventral stomach wallipsiOrgsStomVWS-0.5
Femoral bone marrowcontraOrgSkFemM1
KidneycontraOrgsKid-0.5
SpleencontraOrgSPL-0.5
Intercapsular brown adipose tissueipsiOrgBATi-10
Lumbar epaxial musclesipsiMuscLep-0.5
Femoral bone marrowipsiOrgSkFemM1
KidneyipsiOrgsKid-0.5
SpleenipsiOrgSPL1

Input from

NameSideAbbr.WeightDetails
Central graycontraCG4
Nuclei of the lateral lemniscuscontraNLL3
Interstitial nucleus of medial longitudinal fasciculuscontraIMLF1
Nucleus of DarkschewitschcontraDk0
Lateral periaqueductal graycontraLPAG1
Periaqueductal gray dorsal partcontraPAGd0.5
Ventrolateral periaqueductal graycontraVLPAG1
Inferior colliculuscontraICOL1.5
Superior colliculuscontraSC2
Superior colliculus intermediate and deep layerscontraSCidLa-0.5
Central tegmental fieldcontraTGAC1
Substantia nigra compact partcontraSNC1
Substantia nigra lateral partcontraSNL0.5
Substantia nigra reticular partcontraSNR2
Ventral tegmental area A10contraVTA1
Caudal linear nucleus of the raphecontraCLi0.5
Peripeduncular areacontraPPA0
Retrorubral nucleuscontraRR1
Ventrolateral tegmental areacontraVLTg1
Laterodorsal tegmental nucleuscontraLDTg2
Gigantocellular tegmental fieldcontraGiCTeF1
Ventral tegmental nucleuscontraVTg0
Dorsal tegmental nucleuscontraDTg0
Pedunculopontine tegmental nucleuscontraPPTg3
Rostral mesopontine tegmental anesthesia areacontraRMTGA3
Dorsal mesopontine tegmental anesthesia areacontraDMTGA3
Mid-level mesopontine tegmental anesthesia areacontraMLMTGA3
Ventral mesopontine tegmental anesthesia areacontraVeMTGA3
Caudal mesopontine tegmental anesthesia areacontraCMTGA3
Edinger Westphal nucleuscontraEW0.5
Dorsolateral humpcontraCERcndl0
Deep cerebellar nucleicontraDNC3
Interposed cerebellar nucleicontraICN2
Anterior interposed nucleuscontraAIN1
Posterior interposed nucleuscontraCERpin0
Lateral cerebellar nucleuscontraCERL2
Medial cerebellar nucleuscontraMed2
Barringtons nucleuscontraBar0.5
Locus coeruleuscontraLC1
Pontine tegmental fieldcontraPTF2
Prepositus nucleuscontraPr3
Deep mesencephalic nucleuscontraDpMe4
Pontine reticular nucleuscontraPRN3
Pontine reticular nucleus oral partcontraPnO2
Ventrolateral pontine reticular formationcontravlPRF1
Pontine reticular nucleus caudal partcontraPNC2
Peribrachial regioncontraPBR1
Cuneiforme nucleuscontraCnF1
Parabrachial nucleuscontraPB0
Lateral parabrachial nucleuscontraLPB0.5
Parabrachial nucleus medialcontraPBnMe0.5
Gigantocellular reticular nucleuscontraGi1
Medullary reticular nucleuscontraMdD2
Supragenual nucleuscontraSGe0
Area postremacontraAP0.5
Principal sensory trigeminal nucleuscontraPr50.5
Spinal trigeminal nucleuscontraSp5nc0.5
Spinal trigeminal nucleus caudal partcontraSp5C1
Spinal trigeminal nucleus interpolar partcontraSp5I1
Spinal trigeminal nucleus interpolar part ventral partcontraSp5IV3
Spinal trigeminal nucleus oral partcontraSp5O1
Ventral part of spinal trigeminal nucleus oral partcontraSp5OV3
Dorsal cochlear nucleuscontraDC0
Ventral cochlear nucleuscontraVC1.5
Spinal vestibular nucleuscontraSpVe0.5
Superior vestibular nucleuscontraSuVe1
Medial vestibular nucleuscontraMVe1
Lateral vestibular nucleuscontraLVe1
Nucleus of the solitary tractcontraSol1
Nucleus of the solitary tract caudal partcontraSolca0.5
Nucleus of the solitary tract rostral partcontraSolro0.5
Dorsal raphe nucleuscontraDR3
Linear nucleus of the raphecontraLIR1
Median raphe nucleuscontraMnR1
Medial raphe nucleuscontraMeR0.5
Superior central raphe nucleuscontraCS1
Pontine raphe nucleuscontraPnR1
Raphe magnus nucleuscontraRMg1
Ventral lateral medulla oblongatacontraMVL1
Cuneate nucleuscontraCu1
GracilecontraGra0.5
External cuneate nucleuscontraECu1
Superior olivecontraSuOLi1.5
Paragigantocellular reticular nucleuscontraPGi2
Lateral paragigantocellular nucleuscontraLPGi2
Retrotrapezoid nucleuscontraRTN1
Basal forebraincontraBAF2
Endopiriform systemcontraEnN2
Diagonal band of BrocacontraDBB0.5
Nucleus of the horizontal limb of the diagonal bandcontraHDB1.5
Nucleus of the vertical limb of the diagonal bandcontraVDB0
Medial septal nucleuscontraMS1.5
Basal nucleus MeynertcontraB2
Substantia innominatacontraSI1
Preoptic regioncontraPREO2
Intermediate hypothalamic cell groupscontraIHCG-0.5
Lateral preoptic areacontraLPO0.5
Medial preoptic areacontraMPA1
Magnocellular preoptic nucleuscontraMCPO1.5
Medial preoptic nucleus dorsal partcontraMPOD1
Medial preoptic nucleus rostral partcontraMPOR1
Tuberomammillary nucleuscontraTuM1
Tuberomammillary nucleus dorsomedial partcontraTBMdm1
Tuberomammillary nucleus ventrolateral partcontraTBMvl0.5
Caudal tuberomammillary nucleuscontraTuMC0.5
Dorsomedial hypothalamic nucleuscontraDMHy-0.5
Perifornical hypothalamic area [Preoptic anterior region]contraPFxPAR-0.5
Lateral hypothalamic areacontraLH4
Lateral hypothalamic area dorsal partcontraLHd0
Lateral hypothalamic area posterior partcontraLHAp1
Lateral hypothalamic area ventral partcontraLHAvp-0.5
Border between lateral hypothalamus anterior part and lateral hypothalamus transitions zonecontraLHantbTZ0.5
Anterior hypothalamic areacontraAHA-0.5
Dorsal hypothalamic areacontraDA-0.5
Dorsomedial hypothalamic nucleus [Medial zone]contraDM-0.5
Posterior hypothalamic areacontraPHA0.5
Posterior hypothalamic nucleus caudal partcontraPHCa0.5
Posterior hypothalamic nucleus rostral partcontraPHRo0.5
Ventromedial hypothalamic nucleuscontraVMH0.5
Ventromedial hypothalamic nucleus ventrolateral partcontraVMHVL-0.5
Periventricular zonecontraPVZ-0.5
Paraventricular hypothalamic nucleuscontraPa1
Lateral mammillary nucleuscontraLM0
Medial mammillary nucleuscontraMMn0
Supramammillar nucleuscontraSuM0.5
Perifornical nucleuscontraPeF0
Medial part of the caudal perifornical areacontraPeFCM-0.5
Lateral part of the caudal perifornical areacontraPeFCL-0.5
Anteromedial thalamic nucleuscontraAM1
Anteroventral thalamic nucleuscontraAV1
Centrolateral thalamic nucleuscontraCL1
Paracentral thalamic nucleuscontraPC1
Parafascicular thalamic nucleuscontraPF0.5
Ventrolateral thalamic nucleuscontraVL1
Ventrobasal complexcontraVB1
Nucleus of the stria medullariscontraSM0
Reticular thalamic nucleuscontraRt1
Subparafascicular thalamic nucleus magnocellular partcontraSPFm1
Subparafascicular thalamic nucleus parvicellular partcontraSPFp1
Zona incertacontraZI3
Lateral habenular nucleuscontraLHb1
Anterior pretectal nucleuscontraAPT1
Anterior pretectal nucleus caudal partcontraAPTca1
Anterior pretectal nucleus rostral partcontraAPTro1
Medial terminal nucleus of the accessory optic tractcontraMT0.5
Bed nucleus of the stria terminaliscontraBST2
Central amygdaloid nucleuscontraCe2
Cortex amygdala transition zonecontraCxA0.5
Amygdalopiriform transition areacontraAPir0
Anterior amygdaloid areacontraAA0
Medial amygdaloid nucleuscontraMe0.5
Globus palliduscontraGP0
Medial globus palliduscontraMGP0.5
Ventral pallidumcontraVP1
Subthalamic nucleuscontraSTh1
Cingulate cortexcontraCg2
Frontal association cortexcontraFrA0
Parietal association cortexcontraPtA0.5
Temporal cortexcontraTE0
Perirhinal cortexcontraA350.5
Prefrontal cortexcontraPFC0.5
Medial prefrontal cortexcontramPFC1
Orbital cortexcontraOrC0
Magnocellular nucleus of the posterior commissurecontraMCPC0.5
Interpeduncular nucleuscontraIP0.5
Lateral septal nucleuscontraLS0
Dorsal horn C1contraDHC11
Dorsal horn C2contraDHC21
Dorsal horn C3contraDHC31
Dorsal horn C4contraDHC41
Dorsal horn C5contraDHC51
Dorsal horn C6contraDHC61
Dorsal horn C7contraDHC71
Dorsal horn C8contraDHC81
Dorsal horn T1contraDHT11
Dorsal horn T2contraDHT21
Dorsal horn T3contraDHT31
Dorsal horn T4contraDHT41
Dorsal horn T5contraDHT51
Dorsal horn T6contraDHT61
Dorsal horn T7contraDHT71
Dorsal horn T8contraDHT81
Dorsal horn T9contraDHT91
Dorsal horn T10contraDHT101
Dorsal horn T11contraDHT111
Dorsal horn T12contraDHT121
Dorsal horn T13contraDHT131
Dorsal horn L1contraDHL11
Dorsal horn L2contraDHL21
Dorsal horn L3contraDHL31
Dorsal horn L4contraDHL41
Dorsal horn L5contraDHL51
Dorsal horn L6contraDHL61
Central grayipsiCG4
Central gray pons partipsiCGP-0.5
Nuclei of the lateral lemniscusipsiNLL2
Interstitial nucleus of medial longitudinal fasciculusipsiIMLF1
Nucleus of DarkschewitschipsiDk0
Lateral periaqueductal grayipsiLPAG4
Periaqueductal gray dorsal partipsiPAGd3
Ventrolateral periaqueductal grayipsiVLPAG4
Inferior colliculusipsiICOL3
Superior colliculusipsiSC3
Superior colliculus intermediate and deep layersipsiSCidLa-0.5
Tegmental areaipsiTGA2
Central tegmental fieldipsiTGAC4
Rostromedial tegmental nucleusipsiRMTg3
Substantia nigra A9ipsiSN3
Substantia nigra A9 dorsal partipsiSND1
Substantia nigra A9 dorsocaudal partipsiSNdc0.5
Caudal one third of the substantia nigraipsiSNcot1.5
Caudalmost levels of the substantia nigraipsiSNcm0
Substantia nigra compact partipsiSNC2
Substantia nigra compact part lateral tieripsiSNCL0.5
Substantia nigra compact part mediolateral tieripsiSNCML1.5
Substantia nigra compact part ventral tieripsiSNCV2
Substantia nigra compact part ventral tier dopaminergic neuron populationipsiSNCVdopa0.5
Substantia nigra lateral partipsiSNL3
Substantia nigra reticular partipsiSNR3
Substantia nigra reticular part lateral tieripsiSNRL-0.5
Substantia nigra reticular part medial tieripsiSNRm1
Substantia nigra reticular part ventral subdivisionipsiSNRv1
Ventral tegmental area A10ipsiVTA2
Ventral tegmental tailipsiVTTa1
Caudal linear nucleus of the rapheipsiCLi0.5
Peripeduncular areaipsiPPA1
Retrorubral nucleusipsiRR2
Ventrolateral tegmental areaipsiVLTg1
Laterodorsal tegmental nucleusipsiLDTg2
Gigantocellular tegmental fieldipsiGiCTeF2
Ventral tegmental nucleusipsiVTg0
Dorsal tegmental nucleusipsiDTg0
Pedunculopontine tegmental nucleusipsiPPTg3
Pedunculopontine tegmental nucleus pars compactaipsiPPNC2
Pedunculopontine tegmental nucleus pars dissipataipsiPPNd3
Edinger Westphal nucleusipsiEW0.5
Dorsolateral humpipsiCERcndl0
Deep cerebellar nucleiipsiDNC3
Interposed cerebellar nucleiipsiICN2
Anterior interposed nucleusipsiAIN0
Posterior interposed nucleusipsiCERpin0
Lateral cerebellar nucleusipsiCERL2
Medial cerebellar nucleusipsiMed1
Barringtons nucleusipsiBar1
Locus coeruleusipsiLC2
Pontine tegmental fieldipsiPTF2
Prepositus nucleusipsiPr2
Reticular systemipsiRF3
Mesencephalic reticular formationipsiMRF2
Deep mesencephalic nucleusipsiDpMe4
Pontine reticular nucleusipsiPRN3
Pontine reticular nucleus oral partipsiPnO-0.5
Ventrolateral pontine reticular formationipsivlPRF2
Pontine reticular nucleus caudal partipsiPNC2
Peribrachial regionipsiPBR2
Cuneiforme nucleusipsiCnF2.5
Parabrachial nucleusipsiPB1
Lateral parabrachial nucleusipsiLPB2
Parabrachial nucleus medialipsiPBnMe1
Gigantocellular reticular nucleusipsiGi2
Medullary reticular nucleusipsiMdD2
Subcoeruleus nucleus dorsal partipsiSubCD2
Supragenual nucleusipsiSGe0
Area postremaipsiAP0.5
Facial nucleus lateral subnucleusipsi7L1
Principal sensory trigeminal nucleusipsiPr50.5
Spinal trigeminal nucleusipsiSp5nc0.5
Spinal trigeminal nucleus caudal partipsiSp5C1
Spinal trigeminal nucleus interpolar partipsiSp5I1
Spinal trigeminal nucleus interpolar part ventral partipsiSp5IV0.5
Spinal trigeminal nucleus oral partipsiSp5O1.5
Ventral part of spinal trigeminal nucleus oral partipsiSp5OV0.5
Dorsal cochlear nucleusipsiDC0
Ventral cochlear nucleusipsiVC2.5
Spinal vestibular nucleusipsiSpVe0.5
Vestibular nucleiipsiVnc1
Superior vestibular nucleusipsiSuVe1
Medial vestibular nucleusipsiMVe1
Lateral vestibular nucleusipsiLVe1
Nucleus of the solitary tractipsiSol1.5
Nucleus of the solitary tract caudal partipsiSolca2
Nucleus of the solitary tract rostral partipsiSolro1
Dorsal raphe nucleusipsiDR4
Dorsal raphe nucleus rostral partipsiDRr3
Linear nucleus of the rapheipsiLIR1
Median raphe nucleusipsiMnR2
Medial raphe nucleusipsiMeR0.5
Superior central raphe nucleusipsiCS1
Pontine raphe nucleusipsiPnR1
Raphe magnus nucleusipsiRMg1
Ventral lateral medulla oblongataipsiMVL1.5
Cuneate nucleusipsiCu1
GracileipsiGra0.5
External cuneate nucleusipsiECu1
Superior oliveipsiSuOLi2.5
Paragigantocellular reticular nucleusipsiPGi2
Dorsal paragigantocellular nucleusipsiDPGi-0.5
Lateral paragigantocellular nucleusipsiLPGi2.5
Retrotrapezoid nucleusipsiRTN3
Basal forebrainipsiBAF3
Endopiriform systemipsiEnN3
Diagonal band of BrocaipsiDBB1
Nucleus of the horizontal limb of the diagonal bandipsiHDB2
Nucleus of the vertical limb of the diagonal bandipsiVDB0
Medial septal nucleusipsiMS2
Basal nucleus MeynertipsiB2
Substantia innominataipsiSI2
Substantia innominata dorsal partipsiSID-0.5
Nucleus of the ansa lenticularisipsiAL-0.5
Preoptic regionipsiPREO3
Intermediate hypothalamic cell groupsipsiIHCG1
Lateral preoptic areaipsiLPO2
Medial preoptic areaipsiMPA2
Medial preoptic area anterior partipsiMPAa2.5
Medial preoptic area lateral partipsiMPAL1.5
Magnocellular preoptic nucleusipsiMCPO2
Medial preoptic nucleusipsiMPO1
Medial preoptic nucleus dorsal partipsiMPOD2
Medial preoptic nucleus rostral partipsiMPOR2
Median preoptic nucleusipsiMnPO0.5
Extended ventrolateral preoptic nucleusipsieVLPO0.5
Medial extended ventrolateral preoptic nucleusipsimeVLPO0.5
Ventrolateral preoptic nucleus clusteripsiVLPOc0.5
Tuberomammillary nucleusipsiTuM1
Tuberomammillary nucleus dorsomedial partipsiTBMdm1
Tuberomammillary nucleus ventrolateral partipsiTBMvl3
Caudal tuberomammillary nucleusipsiTuMC3
Dorsomedial hypothalamic nucleusipsiDMHy2
Lateral hypothalamic area anterior part [Preoptic anterior region]ipsiLHAapar1
Perifornical hypothalamic area [Preoptic anterior region]ipsiPFxPAR1
Lateral hypothalamic area [Region of tuber cinereum]ipsiLHTUC2
Lateral zoneipsiLHA0
Lateral hypothalamic areaipsiLH4
Lateral hypothalamic area dorsal partipsiLHd0
Lateral hypothalamic area lateral partipsiLHAL3
Lateral hypothalamic area medial partipsiLHAm2
Lateral hypothalamic area perifornical partipsiPFx2
Lateral hypothalamic area posterior partipsiLHAp3
Lateral hypothalamic area ventral partipsiLHAvp3
Border between lateral hypothalamus anterior part and lateral hypothalamus transitions zoneipsiLHantbTZ2
Tuberal division of the lateral hypothalamic areaipsiLHTC-0.5
Anterior hypothalamic areaipsiAHA2
Anteroventral preoptic nucleusipsiAnV1.5
Area lateralis hypothalamicus posterior [Regio hypothalamus caudalis]ipsiDMrhc1
Dorsal hypothalamic areaipsiDA2.5
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM2
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM2
Posterior hypothalamic areaipsiPHA2
Posterior hypothalamic nucleus caudal partipsiPHCa1
Posterior hypothalamic nucleus rostral partipsiPHRo1
Ventromedial hypothalamic nucleusipsiVMH2
Ventromedial hypothalamic nucleus ventrolateral partipsiVMHVL1
Periventricular zoneipsiPVZ1
Paraventricular hypothalamic nucleusipsiPa3
Paraventricular hypothalamic nucleus magnocellular divisionipsiPaMag1
Paraventricular hypothalamic nucleus parvocellular divisionipsiPavPo2
Lateral mammillary nucleusipsiLM0
Medial mammillary nucleusipsiMMn0
Supramammillar nucleusipsiSuM0.5
Supramammillar nucleus lateral part lateral subpartipsiSuMLL0
Supramammillar nucleus lateral part medial subpartipsiSuMLM0
Supramammillar nucleus medial partipsiSuMM0
Perifornical nucleusipsiPeF0.5
Medial part of the caudal perifornical areaipsiPeFCM1
Lateral part of the caudal perifornical areaipsiPeFCL2
Anteromedial thalamic nucleusipsiAM1
Anteroventral thalamic nucleusipsiAV1
Centrolateral thalamic nucleusipsiCL1
Paracentral thalamic nucleusipsiPC1
Parafascicular thalamic nucleusipsiPF1
Rhomboid thalamic nucleusipsiRh1.5
Ventrolateral thalamic nucleusipsiVL1
Ventrobasal complexipsiVB2
Intralaminar nucleiipsiILN1.5
Lateral posterior thalamic nucleusipsiLP2
Nucleus of the stria medullarisipsiSM0
Reticular thalamic nucleusipsiRt1
Subparafascicular thalamic nucleus magnocellular partipsiSPFm1
Subparafascicular thalamic nucleus parvicellular partipsiSPFp1
Zona incertaipsiZI3
Zona incerta caudal partipsiZIC-0.5
Zona incerta dorsal partipsiZID4
Rostrocaudal part of the dorsal zona incertaipsiZIrcD4
Medial part of the dorsal zona incertaipsiZIDm-0.5
Zona incerta rostral partipsiZIR-0.5
Zona incerta ventral partipsiZIV-0.5
Lateral habenular nucleusipsiLHb1
Lateral habenular nucleus oval subnucleusipsiLHbos0.5
Medial habenular nucleusipsiMHb-1
Anterior pretectal nucleusipsiAPT1
Anterior pretectal nucleus caudal partipsiAPTca2
Anterior pretectal nucleus rostral partipsiAPTro2
Medial terminal nucleus of the accessory optic tractipsiMT0.5
Amygdaloid complexipsiAC2
Basolateral amygdaloid nucleusipsiBL-10
Basomedial amygdaloid nucleusipsiBM-10
Bed nucleus of the stria terminalisipsiBST3
Bed nucleus of the stria terminalis lateral divisionipsiBSTL2
Bed nucleus of the stria terminalis lateral division ventral partipsiBSTLV-0.5
Supracapsular bed nucleus of the stria terminalis lateral partipsiBSTSl-1
Bed nucleus of the stria terminalis ventral partipsiBNSTv2
Central extended amygdala groupipsiCEXA-0.5
Central amygdaloid nucleusipsiCe3
Central amygdaloid nucleus lateral divisionipsiCeL-1
Central amygdaloid nucleus medial divisionipsiCeM-0.5
Interstitial nucleus of the posterior limb of the anterior commissureipsiIPAC-1
Interstitial nucleus of the posterior limb of the anterior commissure medial partipsiIPACM1
Sublenticular extended amygdalaipsiSLEA-1
Central division of sublenticular extended amygdalaipsiSLEAc-0.5
Cortex amygdala transition zoneipsiCxA0.5
Amygdalopiriform transition areaipsiAPir0
Anterior amygdaloid areaipsiAA0
Medial amygdaloid nucleusipsiMe2
Globus pallidusipsiGP1
Caudal globus pallidusipsiGPc2
Lateral globus pallidusipsiLGP1.5
Medial globus pallidusipsiMGP2
Medial globus pallidus caudal one-thirdipsiMGPcot-0.5
Medial globus pallidus rostral partipsiMGPr0
Rostral two-third of the entopeduncular nucleusipsiMGPrtt0.5
Rostral globus pallidusipsiGPr0
Ventral pallidumipsiVP1
StriatumipsiSTR-0.5
Dorsal coreipsiAcbCd1
Dorsomedial coreipsiAcbCdm1
Ventral coreipsiAcbCv1
Accumbens nucleus caudomedial shellipsiAcbShcm1
Dorsomedial shellipsiAcbShdm2
Ventromedial shellipsiAcbShvm1
Substriatal areaipsiSSTr2
Subthalamic nucleusipsiSTh2
Field CA1 of hippocampusipsiCA1-10
Lateral entorhinal cortex layer 2ipsiLEntL2-10
Lateral entorhinal cortex layer 3ipsiLEntL3-10
Piriform cortex layer 2ipsiPirL2-10
Piriform cortex layer 3ipsiPirL32
Cingulate cortexipsiCg3
Cingulate cortex area 1 caudal partipsiCg1c0.5
Cingulate cortex area 2 caudal partipsiCg2c0.5
Prelimbic cortexipsiPrL1
Prelimbic cortex dorsal partipsiPrLd1
Prelimbic cortex ventral partipsiPrLv1
Infralimbic cortexipsiIL1
Frontal association cortexipsiFrA0
Frontal cortex area 2ipsiFr20.5
Parietal association cortexipsiPtA0.5
Temporal cortexipsiTE0
Perirhinal cortexipsiA350.5
Prefrontal cortexipsiPFC0.5
Rostral part of lateral agranular prefrontal cortex layer 5ipsiAGlrL5-0.5
Medial prefrontal cortexipsimPFC1
Medial agranular prefrontal cortex rostral part layer 5ipsirAGmL5-0.5
Orbital cortexipsiOrC0
Magnocellular nucleus of the posterior commissureipsiMCPC0.5
Interpeduncular nucleusipsiIP2
Anterior olfactory nucleusipsiAON-10
Olfactory tubercle polymorph layeripsiTuOpo1
Septal regionipsiSER1
Lateral septal nucleusipsiLS0
Dorsal horn of spinal cordipsiDHMES2
Dorsal horn C1ipsiDHC11.5
Dorsal horn C2ipsiDHC21.5
Dorsal horn C3ipsiDHC31.5
Dorsal horn C4ipsiDHC41.5
Dorsal horn C5ipsiDHC51.5
Dorsal horn C6ipsiDHC61.5
Dorsal horn C7ipsiDHC71.5
Dorsal horn C8ipsiDHC81.5
Dorsal horn T1ipsiDHT11
Dorsal horn T2ipsiDHT21
Dorsal horn T3ipsiDHT31
Dorsal horn T4ipsiDHT41
Dorsal horn T5ipsiDHT51
Dorsal horn T6ipsiDHT61
Dorsal horn T7ipsiDHT71
Dorsal horn T8ipsiDHT81
Dorsal horn T9ipsiDHT91
Dorsal horn T10ipsiDHT101
Dorsal horn T11ipsiDHT111
Dorsal horn T12ipsiDHT121
Dorsal horn T13ipsiDHT131
Dorsal horn L1ipsiDHL11
Dorsal horn L2ipsiDHL21
Dorsal horn L3ipsiDHL31
Dorsal horn L4ipsiDHL41
Dorsal horn L5ipsiDHL51
Dorsal horn L6ipsiDHL61
TongueipsiOrgOCT-10
Anterior digastricus muscleipsiMuscADig-10
Posterior digastricus muscleipsiMuscPDig-10
Genioglossus muscleipsiMuscGenioG-10
Geniohyoid muscleipsiMuscGenio-10
Musculus masseteripsiMuscMass-10
Temporal muscleipsiMuscT-10
Pterygoid muscleipsiMuscPterygo-10
Mylohyoid muscleipsiMuscMyhy-10
Styloglossus muscle systemipsiMuscStyG-10
Buccinator muscleipsiMuscBucc-10
PlatysmaipsiMuscPla-10
Zygomatic muscleipsiMuscZygo-10
Hyoglossus muscleipsiMuscHyo-10

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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