University of Rostock

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Rat connectome



Spinal trigeminal nucleus caudal part layer 3 left


Abbreviation
Sp5CaL3
Color       
Superior regionsSpinal trigeminal nucleus caudal part layers

SynonymsAbbr.Language
Spinal trigeminal nucleus caudal part layer 3Sp5CaL3 
Spinal trigeminal nucleus caudal part layer 3Sp5CL3 
Caudal part of layer 3 of the trigeminal nucleus caudalis Eng

SubregionsSide
Medial half of lamina 3 of the trigeminal nucleus caudalisleft
Spinal trigeminal nucleus caudal part layer 3 multipolar neuronsleft
Spinal trigeminal nucleus caudal part superficial layer 3left

Output to

NameSideAbbr.WeightDetails
A5 noradrenaline cellsipsiA51
Parabrachial nucleusipsiPB2
Koelliker Fuse nucleusipsiKF1
Lateral parabrachial nucleusipsiLPB1
Lateral parabrachial nucleus ventrolateral partipsiLPBVL1
Parabrachial nucleus dorsolateral partipsiPBDL1
Parabrachial nucleus ventral part lateral portionipsiPBVL1
Gigantocellular reticular nucleusipsiGi1
Gigantocellular reticular nucleus alpha partipsiGiA1
Principal sensory trigeminal nucleusipsiPr52
Spinal trigeminal nucleus interpolar partipsiSp5I2
Spinal trigeminal nucleus oral partipsiSp5O2
Spinal trigeminal nucleus rostral partipsiSp5ncR2
Raphe magnus nucleusipsiRMg1
Raphe obscurus nucleusipsiROb1
Raphe pallidus nucleusipsiRPa1
Superior salivatory nucleusipsiSuS1
Rostral part of the ventromedial medulla oblongataipsiRMeObvm1
Lateral hypothalamic area rostrocaudal extendipsiLHrce0.5
Centrolateral thalamic nucleusipsiCL2
Gelatinosus thalamic nucleusipsiG-0.5
Parafascicular thalamic nucleusipsiPF2
Posterior thalamic nuclear groupipsiPo2
Submedius thalamic nucleusipsiSub2
Ventrobasal complexipsiVB0.5
Ventral posterolateral thalamic nucleusipsiVPL2
Ventral posteromedial thalamic nucleusipsiVPM2
Lateral part of ventral posteromedial thalamic nucleusipsiVPML0.5
Medial part of ventral posteromedial thalamic nucleusipsiVPMm0.5
Ventral posteromedial thalamic nucleus intermediate partipsiVPMi0.5
Ventromedial thalamic nucleusipsiVM2
Intralaminar nucleiipsiILN0.5
Parabrachial nucleuscontraPB3
Koelliker Fuse nucleuscontraKF0.5
Lateral parabrachial nucleuscontraLPB1
Lateral parabrachial nucleus ventrolateral partcontraLPBVL0.5
Parabrachial nucleus ventral part lateral portioncontraPBVL0.5
Principal sensory trigeminal nucleuscontraPr51
Spinal trigeminal nucleus interpolar partcontraSp5I1
Spinal trigeminal nucleus oral partcontraSp5O1
Lateral hypothalamic area rostrocaudal extendcontraLHrce1
Gelatinosus thalamic nucleuscontraG-0.5
Posterior thalamic nuclear groupcontraPo2.5
Ventrobasal complexcontraVB1
Ventral posterolateral thalamic nucleuscontraVPL1
Ventral posteromedial thalamic nucleuscontraVPM2
Lateral part of ventral posteromedial thalamic nucleuscontraVPML1
Medial part of ventral posteromedial thalamic nucleuscontraVPMm1
Ventral posteromedial thalamic nucleus intermediate partcontraVPMi1
Intralaminar nucleicontraILN1
Vibrissal follicle complex B1ipsiVFCB13
Vibrissal follicle complex C1ipsiVFCC13
Vibrissal follicle complex C2ipsiVFCC23
Vibrissal follicle complex D2ipsiVFCD23

Input from

NameSideAbbr.WeightDetails
Dorsal periaqueductal grayipsiDPAG3
Dorsolateral periaqueductal grayipsiDLPAG3
Caudal part of the medial periaqueductal grayipsiPAGmc3
Ventral periaqueductal grayipsiVPAG1
Ventrolateral periaqueductal grayipsiVLPAG3
Trigeminal ganglionipsi5Gn-0.5
Dorsal raphe nucleusipsiDR3
Primary somatosensory cortex barrel fieldipsiS1BF2
Dorsal periaqueductal graycontraDPAG1
Dorsolateral periaqueductal graycontraDLPAG1
Caudal part of the medial periaqueductal graycontraPAGmc1
Ventral periaqueductal graycontraVPAG0.5
Ventrolateral periaqueductal graycontraVLPAG1
Trigeminal ganglioncontra5Gn-0.5
Dorsal raphe nucleuscontraDR1
Primary somatosensory cortex barrel fieldcontraS1BF3
Inferior alveolar nerveipsiialv-0.5
Auriculotemporal nerveipsi5V3Aute-0.5
Lingual nerveipsi5V3Li1
Mental nerveipsiment-0.5
Mylohyoid nerveipsimyhy-0.5
Buccal nerveipsibucc-0.5
Lingual nervecontra5V3Li0.5
Mental nervecontrament-0.5
Inferior alveolar nervecontraialv-0.5
Lower incisoripsiOrgLoi3
Fascial vibrissal follicle complexesipsiFVFC-0.5
Supraorbital whiskersipsiSuOrW-0.5
Large supraorbital vibrissaeipsiLSuOrW1.5
Small supraorbital vibrissaeipsiSSuOrW1.5
Vibrissal follicle complexipsiVFC-0.5
Vibrissal follicle complex A1ipsiVFCA10.5
Vibrissal follicle complex A2ipsiVFCA20.5
Vibrissal follicle complex A3ipsiVFCA30.5
Vibrissal follicle complex A4ipsiVFCA40.5
Vibrissal follicle complex B1ipsiVFCB10.5
Vibrissal follicle complex B2ipsiVFCB20.5
Vibrissal follicle complex B3ipsiVFCB30.5
Vibrissal follicle complex B4ipsiVFCB40.5
Vibrissal follicle complex C1ipsiVFCC10.5
Vibrissal follicle complex C2ipsiVFCC20.5
Vibrissal follicle complex C3ipsiVFCC30.5
Vibrissal follicle complex C4ipsiVFCC40.5
Vibrissal follicle complex C5ipsiVFCC50.5
Vibrissal nerve of follicle C1ipsinVFCrCL1-0.5
Vibrissal follicle complex D4ipsiVFCD4-0.5
Mandibular auriculotemporal vibrissaipsiFVFCmat-0.5
Upper lip hairipsiFVFCuLh-0.5
Chin hairipsiFVFCch-0.5
Eyelid hairipsiFVFCeLh3
Slowly adapting cutaneous receptors of facial skinipsiOrgBSheadsar-0.5
Guard hairipsiOrgGuH-0.5
Mystacial guard hairipsiOrgMGuH-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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