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Rat connectome



Submedius thalamic nucleus left


Abbreviation
Sub
Color       
Superior regionsMedial group of the dorsal thalamus

SynonymsAbbr.Language
 SM 
 SMT 
Thalamic gelatinosus nucleus  
Gelatinosus thalamic nucleus  
Nucleus gelatinosus  
Submedial nucleus of the thalamus  
Nucleus submediusSmEng
Submedius thalamic nucleusSubEng
Submedial nucleus  
Submedial thalamic nucleus Eng
Submedial nucleus Eng

SubregionsSide
Submedius thalamic nucleus dorsal partleft
Submedius thalamic nucleus lateral partleft
Submedius thalamic nucleus medial partleft
Submedius thalamic nucleus parvicellular partleft
Submedius thalamic nucleus posterior partleft
Submedius thalamic nucleus rostral partleft
Submedius thalamic nucleus shellleft
Submedius thalamic nucleus ventral partleft
Submedius thalamic nucleus ventromedial partleft
Submedius thalamic nucleus anteroventral partleft
Submedius thalamic nucleus rostroventral partleft
Submedius thalamic nucleus caudodorsal partleft
Submedius thalamic nucleus ventrolateral partleft
Submedius thalamic nucleus dorsomedial part left

Output to

NameSideAbbr.WeightDetails
Median preoptic nucleusipsiMnPO1
Ventrolateral preoptic nucleusipsiVLPO1
Reticular thalamic nucleusipsiRt-0.5
Zona incerta rostral partipsiZIR-0.5
ClaustrumipsiCl0
Accumbens nucleus anteromedial partipsiAcAM1
Caudate putamenipsiCPu-0.5
Piriform cortexipsiPir-0.5
Cingulate cortexipsiCg2
Anterior cingulate cortexipsiACC-0.5
Dorsal anterior cingulate cortex layer 1aipsiDACCL1a4
Prelimbic cortex layer 1aipsiPrLL1a4
Prelimbic cortex rostral partipsiPrLr-0.5
Infralimbic cortex layer 1aipsiILL1a4
Frontal association cortexipsiFrA1
Frontal cortex area 2 dorsal part layer 1aipsiFr2DL1a4
Parietal association cortexipsiPtA1
Caudal half of agranular insular area in the fundus and dorsal lip of rhinal sulcusipsiAIChF2
Agranular insular cortex dorsal part superficial layersipsiAIDsL-0.5
Agranular insular cortex dorsal part layer 1aipsiAIDL1a4
Agranular insular cortex rostral partipsiRAIC1
Most rostral part of the posterior agranular insular cortexipsiAIPpmr3
Agranular insular cortex ventral part layer 1aipsiAIVL1a4
Dysgranular insular cortexipsiDI0
Granular insular cortexipsiGI0
Granular insular cortex caudal partipsiGIC2
Granular insular cortex layer 4ipsiGIL4-0.5
Granular insular cortex layer 3ipsiGIL3-0.5
Granular insular cortex layer 1ipsiGIL1-0.5
Perirhinal cortexipsiA353
Lateral agranular prefrontal cortex layer 1ipsiAGlL1-0.5
Lateral agranular prefrontal cortex layer 3ipsiAGlL3-0.5
Lateral agranular prefrontal cortex layer 4ipsiAGlL4-0.5
Medial prefrontal cortexipsimPFC0
Primary somatosensory cortexipsiS10
Secondary somatosensory cortexipsiS22
Anterior medial frontal cortexipsiAMFC3
Orbital cortexipsiOrC-0.5
Lateral orbital cortexipsiLO3
Lateral orbital cortex layer 1aipsiLOLaL1a4
Medial orbital cortexipsiMO-1
Medial orbital cortex layer 1aipsiMOcxL1a4
Ventral orbital cortexipsiVO-1
Ventrolateral orbital areaipsiVLO3
Ventrolateral orbital area caudal partipsiVLOC0
Ventrolateral orbital area layer 3ipsiVLOL3-0.5
Ventrolateral orbital area layer 4ipsiVLOL4-0.5
Ventrolateral orbital area layer 1ipsiVLOL1-0.5
Ventrolateral orbital area medial partipsiVLOm0
Ventrolateral orbital area posterior partipsiVLOp3
Lateral orbitofrontal cortexipsiLOFC-0.5
Ventral orbitofrontal cortexipsiVOFC3
Olfactory cortexipsiOcx0
Ventrolateral preoptic nucleuscontraVLPO-0.5
Agranular insular cortex rostral partcontraRAIC1
Lateral orbital cortexcontraLO0.5
Ventrolateral orbital areacontraVLO-0.5

Input from

NameSideAbbr.WeightDetails
Central gray ventral areaipsiCGva1
Central grey rostral areaipsirCG1
Paralemniscal nucleusipsiPL0
Nucleus of DarkschewitschipsiDk1
Periaqueductal grayipsiPAG-0.5
Dorsolateral periaqueductal grayipsiDLPAG0.5
Dorsomedial periaqueductal grayipsiDMPAG0.5
Lateral periaqueductal grayipsiLPAG1
Periaqueductal gray dorsal partipsiPAGd1
Ventral periaqueductal grayipsiVPAG2
Ventrolateral periaqueductal grayipsiVLPAG2
Ventromedial periaqueductal grayipsiVMPAG2
Periventricular gray matteripsiPVG0
Superior colliculusipsiSC-0.5
Superior colliculus lateral partipsiSCL1
Deep gray layer of the superior colliculusipsiDpG2
Superior colliculus medial partipsimSC0.5
Tegmental areaipsiTGA1
Central tegmental fieldipsiTGAC0
Peduncularpontine nucleusipsiPPN-0.5
Subpeduncular tegmental nucleusipsiSPTg0
Substantia nigra compact partipsiSNC1
Substantia nigra reticular partipsiSNR2
Ventral tegmental area A10ipsiVTA1
Parabrachial pigmented nucleusipsiPBP0
Caudal linear nucleus of the rapheipsiCLi0
Laterodorsal tegmental nucleusipsiLDTg2
Dorsal tegmental nucleusipsiDTg3
Pedunculopontine tegmental nucleusipsiPPTg1
Interstitial nucleus of CajalipsiInC0
A5 noradrenaline cellsipsiA50
Barringtons nucleusipsiBar-0.5
Locus coeruleusipsiLC4
Nucleus incertusipsiNI0
Dorsomedial tegmental areaipsiDMTg1
Prepositus nucleusipsiPr0
Reticular systemipsiRF1
Intermediate reticular nucleusipsiIRt0
Mesencephalic reticular formationipsiMRF-0.5
Deep mesencephalic nucleusipsiDpMe1
Pontine reticular nucleus oral partipsiPnO1
Pontine reticular nucleus ventral partipsiPnV0
Pontine reticular nucleus caudal partipsiPNC1
Cuneiforme nucleusipsiCnF1
Parabrachial nucleusipsiPB3
Parabrachial nucleus medialipsiPBnMe2
Parabrachial nucleus medial caudoventral partipsiPBnMeCV2
Gigantocellular reticular nucleusipsiGi1
Gigantocellular reticular nucleus alpha partipsiGiA0
Lateral reticular nucleusipsiLRt2
Medullary reticular nucleusipsiMdD0
Subnucleus reticularis dorsalisipsiSRD0
Medullary reticular nucleus ventral partipsiMdV0
Parvicellular reticular nucleusipsiPCRt0
Subcoeruleus nucleusipsiSubC0
Hypoglossal nucleusipsi12S1
Juxtatrigeminal areaipsiJx51
Paratrigeminal nucleusipsiPa51
Supratrigeminal nucleusipsiSu50
Mesencephalic trigeminal nucleusipsiMe53
Principal sensory trigeminal nucleusipsiPr50
Spinal trigeminal nucleusipsiSp5nc2
Spinal trigeminal nucleus caudal partipsiSp5C1
Deep spinal trigeminal nucleus caudal partipsiDSp5C1
Spinal trigeminal nucleus caudal part layer 3ipsiSp5CaL32
Spinal trigeminal nucleus caudal part layer 1ipsiSp5CaL13
Spinal trigeminal nucleus caudal part layer 2ipsiSp5CaL21
Spinal trigeminal nucleus caudal part magnocellular layeripsiSp5CmL0.5
Superficial spinal trigeminal nucleus caudal partipsiSSp5C3
Spinal trigeminal nucleus interpolar partipsiSp5I3
Spinal trigeminal nucleus interpolar part caudalipsiSp5Ic3
Spinal trigeminal nucleus interpolar part rostralipsiSp5Ir1
Spinal trigeminal nucleus oral partipsiSp5O0
Trigeminal subnucleus caudalisipsi5SSC-0.5
Trigeminal subnucleus caudalis rostral partipsi5SSCr-0.5
Ventrolateral of the trigeminal subnucleus caudalisipsi5SSCVL-0.5
Trigeminal subnucleus caudalis lamina 1ipsi5SSCL13
Vestibular nucleiipsiVnc0
Nucleus of the solitary tractipsiSol1
Dorsal raphe nucleusipsiDR3
Dorsal raphe nucleus caudal partipsiDRC2
Dorsal raphe nucleus dorsal partipsiDRD2
Dorsal raphe nucleus ventral partipsiDRV2
Dorsal raphe nucleus ventrolateral partipsiDRVL3
Rostral linear nucleus of the rapheipsiRLi0
Median raphe nucleusipsiMnR2
Paramedian raphe nucleusipsiPMnR0
Pontine raphe nucleusipsiPnR1
Raphe interpositus nucleusipsiRIP0
Raphe magnus nucleusipsiRMg2
Raphe obscurus nucleusipsiROb1
Raphe pallidus nucleusipsiRPa0
Rostral ventrolateral medullaipsiRVLM0
Dorsal column nucleiipsiDCN1
Cuneate nucleusipsiCu0
Gracile nucleus principal partipsiGr0
Inferior oliveipsiIO1
Paragigantocellular reticular nucleusipsiPGi2
Dorsal paragigantocellular nucleusipsiDPGi0
Lateral paragigantocellular nucleusipsiLPGi0
Endopiriform systemipsiEnN-0.5
Nucleus of the horizontal limb of the diagonal bandipsiHDB2
Lateral part of the nucleus of the horizontal limb of the diagonal bandipsiLPHDB2
Nucleus of the vertical limb of the diagonal bandipsiVDB2
Substantia innominataipsiSI2
Tenia tectaipsiTT-0.5
Lateral hypothalamic areaipsiLH2
Lateral hypothalamic area perifornical partipsiPFx0
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM0
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM0
Posterior hypothalamic nucleus caudal partipsiPHCa1
Posterior hypothalamic nucleus rostral partipsiPHRo0
Ventromedial hypothalamic nucleusipsiVMH2
Suprachiasmatic nucleusipsiSCh0
Suprachiasmatic nucleus dorsomedial partipsiSCnDM0
Suprachiasmatic nucleus ventrolateral partipsiSCnVL0
Medial mammillary nucleusipsiMMn2
A8 dopamine cells retrorubral groupipsiRRF0
Anteromedial thalamic nucleusipsiAM2
Central medial thalamic nucleusipsiCM2
Rhomboid thalamic nucleusipsiRh2
Reuniens thalamic nucleusipsiRe2
Ventrolateral thalamic nucleusipsiVL2
Ventromedial thalamic nucleusipsiVM2
Reticular thalamic nucleusipsiRt2
Reticular thalamic nucleus rostroventral partipsiRtrv2
Lateral habenular nucleusipsiLHb2
Posterior basomedial nucleusipsiBMP-0.5
ClaustrumipsiCl2
Anterior part of the claustrumipsiACl3
Globus pallidusipsiGP2
Ventral pallidumipsiVP2
Lateral nucleus accumbensipsiAcl2
Caudal striatum ventromedial partipsiCPucvm2
Rostroventral striatumipsiCPurv2
Lateral striatumipsiCPul1
Subiculum proximal partipsiSpx1
Anterior piriform cortex medial partipsiAPIRCMP2
Lateral piriform cortexipsiPirLa0
Piriform cortex layersipsiPirL0
Piriform cortex deep layersipsiPirLd1
Prepiriform cortexipsiPRPIR-0.5
Cerebral cortex layer 1ipsiCCL10
Anterior cingulate cortexipsiACC2
Prelimbic cortexipsiPrL2
Prelimbic cortex layer 5ipsiPrLL52
Prelimbic cortex layer 6ipsiPrLL62
Prelimbic cortex rostral partipsiPrLr-0.5
Parietal association cortexipsiPtA-0.5
Parietal cortex posterior areaipsiParP-0.5
Parietal cortex posterior area lateral portionipsiParPL1
Parietal cortex posterior area caudomedial part of the lateral portionipsiParPcmL1
Parietal cortex posterior area medial portionipsimPPC1
Insular cortexipsiICX-0.5
Agranular insular cortexipsiAI2
Agranular insular cortex dorsal partipsiAID1
Agranular insular cortex rostral partipsiRAIC3
Agranular insular cortex posterior partipsiAIP1
Agranular insular cortex ventral partipsiAIV1
Dorsal peduncular cortexipsiDP2
Sensory regionsipsiSR-0.5
Primary somatosensory cortexipsiS1-0.5
Primary visual cortexipsiV1-0.5
Secondary visual cortexipsiV2-0.5
Secondary visual cortex lateral areaipsiV2L-0.5
Secondary visual cortex rostromedial partipsiV2rm-0.5
Orbitofrontal cortexipsiOrFCx-0.5
Lateral orbital cortex medial partipsiLOm1
Medial orbital cortexipsiMO1
Ventral orbital cortexipsiVO3
Ventrolateral orbital areaipsiVLO2
Ventrolateral orbital area deep layersipsiVLOd2
Ventrolateral orbital area layer 5ipsiVLOL53
Ventrolateral orbital area rostral partipsiVLOr3
Lateral orbitofrontal cortexipsiLOFC-0.5
Ventral orbitofrontal cortexipsiVOFC-0.5
Ventral lateral geniculate nucleusipsiVLG-3
Interpeduncular nucleusipsiIP1
Interpeduncular nucleus rostral subnucleus midrostrocaudal partipsiIPRmrc-0.5
Olfactory cortexipsiOcx2
External plexiform layer of the olfactory bulbipsiOBepl0
Outer polymorphic cell layer of the olfactory cortexipsiOcxLOP0
Anterior olfactory nucleusipsiAON1
Anterior olfactory nucleus medial partipsiAONm-0.5
Olfactory tubercleipsiTuO2
Olfactory tubercle deep layersipsiTuODL2
Olfactory tubercle polymorph layeripsiTuOpo2
Spinal cordipsiMES2
Cervical segment 1ipsiCS11.5
Intermediomedial cell column C1ipsiIMMC11.5
Lateral cervical nucleus C1ipsiLatCC10.5
Lateral spinal nucleus C1ipsiLSpC12
Spinal cord layers C1ipsiSCLC12
Area X C1ipsiSCL10C10.5
Dorsal horn C1ipsiDHC12.5
Spinal cord layer 1 C1ipsiSCL1C10.5
Ventral horn C1ipsiVHC11.5
Cervical segment 2ipsiCS21.5
Intermediomedial cell column C2ipsiIMMC21.5
Lateral cervical nucleus C2ipsiLatCC20.5
Lateral spinal nucleus C2ipsiLSpC22
Spinal cord layers C2ipsiSCLC22
Area X C2ipsiSCL10C20.5
Dorsal horn C2ipsiDHC22.5
Spinal cord layer 1 C2ipsiSCL1C20.5
Ventral horn C2ipsiVHC21.5
Lateral spinal nucleus C3ipsiLSpC32
Spinal cord layers C3ipsiSCLC32
Cervical segment 4ipsiCS41.5
Intermediomedial cell column C4ipsiIMMC41.5
Lateral cervical nucleus C4ipsiLatCC40.5
Lateral spinal nucleus C4ipsiLSpC42
Spinal cord layers C4ipsiSCLC42
Area X C4ipsiSCL10C40.5
Dorsal horn C4ipsiDHC42.5
Spinal cord layer 1 C4ipsiSCL1C40.5
Ventral horn C4ipsiVHC41.5
Cervical segment 5ipsiCS51.5
Intermediomedial cell column C5ipsiIMMC51.5
Lateral cervical nucleus C5ipsiLatCC50.5
Lateral spinal nucleus C5ipsiLSpC52
Spinal cord layers C5ipsiSCLC52
Area X C5ipsiSCL10C50.5
Dorsal horn C5ipsiDHC52.5
Spinal cord layer 1 C5ipsiSCL1C50.5
Ventral horn C5ipsiVHC51.5
Lateral spinal nucleus C6ipsiLSpC62
Spinal cord layers C6ipsiSCLC62
Cervical segment 7ipsiCS71.5
Intermediomedial cell column C7ipsiIMMC71.5
Lateral cervical nucleus C7ipsiLatCC70.5
Lateral spinal nucleus C7ipsiLSpC72
Spinal cord layers C7ipsiSCLC72
Area X C7ipsiSCL10C70.5
Dorsal horn C7ipsiDHC72.5
Spinal cord layer 5 C7ipsiSCL5C70.5
Spinal cord layer 3 C7ipsiSCL3C70.5
Spinal cord layer 4 C7ipsiSCL4C70.5
Spinal cord layer 1 C7ipsiSCL1C70.5
Spinal cord layer 2 C7ipsiSCL2C70
Ventral horn C7ipsiVHC71.5
Cervical segment 8ipsiCS81.5
Intermediomedial cell column C8ipsiIMMC81.5
Lateral cervical nucleus C8ipsiLatCC80.5
Lateral spinal nucleus C8ipsiLSpC82
Spinal cord layers C8ipsiSCLC82
Area X C8ipsiSCL10C80.5
Dorsal horn C8ipsiDHC82.5
Spinal cord layer 1 C8ipsiSCL1C80.5
Ventral horn C8ipsiVHC81.5
Lateral spinal nucleus T1ipsiLSpT12
Spinal cord layers T1ipsiSCLT10
Lateral spinal nucleus T2ipsiLSpT22
Spinal cord layers T2ipsiSCLT20
Lateral spinal nucleus T3ipsiLSpT32
Thoracal segment 4ipsiT41.5
Intermediomedial cell column T4ipsiIMMT41.5
Lateral spinal nucleus T4ipsiLSpT42
Area X T4ipsiSCL10T40.5
Dorsal horn T4ipsiDHT42.5
Spinal cord layer 1 T4ipsiSCL1T40.5
Ventral horn T4ipsiVHT41.5
Lateral spinal nucleus T5ipsiLSpT52
Intermediomedial cell column T6ipsiIMMT61.5
Lateral spinal nucleus T6ipsiLSpT62
Area X T6ipsiSCL10T60.5
Dorsal horn T6ipsiDHT61.5
Spinal cord layer 1 T6ipsiSCL1T60.5
Ventral horn T6ipsiVHT61.5
Lateral spinal nucleus T7ipsiLSpT72
Thoracal segment 8ipsiT81.5
Intermediomedial cell column T8ipsiIMMT81.5
Lateral spinal nucleus T8ipsiLSpT82
Area X T8ipsiSCL10T80.5
Dorsal horn T8ipsiDHT82.5
Spinal cord layer 1 T8ipsiSCL1T80.5
Ventral horn T8ipsiVHT81.5
Lateral spinal nucleus T9ipsiLSpT92
Lateral spinal nucleus T10ipsiLSpT102
Lateral spinal nucleus T11ipsiLSpT112
Thoracal segment 12ipsiT121.5
Intermediomedial cell column T12ipsiIMMT121.5
Lateral spinal nucleus T12ipsiLSpT122
Area X T12ipsiSCL10T120.5
Dorsal horn T12ipsiDHT122.5
Spinal cord layer 1 T12ipsiSCL1T120.5
Ventral horn T12ipsiVHT121.5
Lateral spinal nucleus T13ipsiLSpT132
Lumbar segment 1ipsiL11.5
Intermediomedial cell column L1ipsiIMML11.5
Lateral spinal nucleus L1ipsiLSpL12
Spinal cord layers L1ipsiSCLL10
Area X L1ipsiSCL10L10.5
Dorsal horn L1ipsiDHL12.5
Spinal cord layer 1 L1ipsiSCL1L10.5
Ventral horn L1ipsiVHL11.5
Lumbar segment 2ipsiL21.5
Intermediomedial cell column L2ipsiIMML21.5
Lateral spinal nucleus L2ipsiLSpL22
Spinal cord layers L2ipsiSCLL20
Area X L2ipsiSCL10L20.5
Dorsal horn L2ipsiDHL22.5
Spinal cord layer 1 L2ipsiSCL1L20.5
Ventral horn L2ipsiVHL21.5
Lumbar segment 3ipsiL31.5
Intermediomedial cell column L3ipsiIMML31.5
Lateral spinal nucleus L3ipsiLSpL32
Spinal cord layers L3ipsiSCLL30
Area X L3ipsiSCL10L30.5
Dorsal horn L3ipsiDHL32.5
Spinal cord layer 1 L3ipsiSCL1L30.5
Ventral horn L3ipsiVHL31.5
Lumbar segment 4ipsiL41.5
Intermediomedial cell column L4ipsiIMML41.5
Lateral spinal nucleus L4ipsiLSpL42
Spinal cord layers L4ipsiSCLL40
Area X L4ipsiSCL10L40.5
Dorsal horn L4ipsiDHL42.5
Spinal cord layer 1 L4ipsiSCL1L40.5
Ventral horn L4ipsiVHL41.5
Lumbar segment 5ipsiL51.5
Intermediomedial cell column L5ipsiIMML51.5
Lateral spinal nucleus L5ipsiLSpL52
Spinal cord layers L5ipsiSCLL50
Area X L5ipsiSCL10L50.5
Dorsal horn L5ipsiDHL52.5
Spinal cord layer 1 L5ipsiSCL1L50.5
Ventral horn L5ipsiVHL51.5
Lumbar segment 6ipsiL61.5
Intermediomedial cell column L6ipsiIMML61.5
Lateral spinal nucleus L6ipsiLSpL62
Spinal cord layers L6ipsiSCLL61.5
Area X L6ipsiSCL10L60.5
Dorsal horn L6ipsiDHL62.5
Spinal cord layer 1 L6ipsiSCL1L60.5
Ventral horn L6ipsiVHL61.5
Lateral spinal nucleus S1ipsiLSpS12
Spinal cord layers S1ipsiSCLS11.5
Sacral segment 2ipsiSa21.5
Intermediomedial cell column S2ipsiIMMS21.5
Lateral spinal nucleus S2ipsiLSpS22
Area X S2ipsiSCL10S20.5
Dorsal horn S2ipsiDHS22.5
Spinal cord layer 1 S2ipsiSCL1S20.5
Ventral horn S2ipsiVHSa21.5
Lateral spinal nucleus S3ipsiLSpS32
Lateral spinal nucleus S4ipsiLSpS42
Lateral spinal nucleus Co1ipsiLSpCo12
Lateral spinal nucleus Co2ipsiLSpCo22
Lateral spinal nucleus Co3ipsiLSpCo32
Ventrolateral periaqueductal graycontraVLPAG1
Ventromedial periaqueductal graycontraVMPAG1
Superior colliculus lateral partcontraSCL0.5
Deep gray layer of the superior colliculuscontraDpG1
Superior colliculus medial partcontramSC0.5
Substantia nigra reticular partcontraSNR1
Laterodorsal tegmental nucleuscontraLDTg2
Parabrachial nucleuscontraPB1
Parabrachial nucleus medialcontraPBnMe1
Parabrachial nucleus medial caudoventral partcontraPBnMeCV1
Juxtatrigeminal areacontraJx52
Supratrigeminal nucleuscontraSu50
Spinal trigeminal nucleuscontraSp5nc1
Spinal trigeminal nucleus caudal partcontraSp5C3
Spinal trigeminal nucleus caudal part layer 1contraSp5CaL12
Spinal trigeminal nucleus caudal part magnocellular layercontraSp5CmL0.5
Spinal trigeminal nucleus interpolar partcontraSp5I4
Spinal trigeminal nucleus interpolar part caudalcontraSp5Ic2
Spinal trigeminal nucleus interpolar part rostralcontraSp5Ir2
Dorsal raphe nucleuscontraDR1.5
Median raphe nucleuscontraMnR1
Nucleus of the horizontal limb of the diagonal bandcontraHDB1
Lateral part of the nucleus of the horizontal limb of the diagonal bandcontraLPHDB1
Nucleus of the vertical limb of the diagonal bandcontraVDB1
Substantia innominatacontraSI1
Lateral hypothalamic areacontraLH1
Ventromedial hypothalamic nucleuscontraVMH1
Medial mammillary nucleuscontraMMn1
Ventromedial thalamic nucleus lateral partcontraVML1
Reticular thalamic nucleuscontraRt1
Reticular thalamic nucleus rostroventral partcontraRtrv1
Reticular thalamic nucleus ventromedial partcontraRtvm1
Lateral habenular nucleuscontraLHb1
ClaustrumcontraCl1
Globus palliduscontraGP0
Ventral pallidumcontraVP1
Caudate putamencontraCPu0
Anterior cingulate cortexcontraACC1
Prelimbic cortexcontraPrL1
Prelimbic cortex layer 5contraPrLL51
Prelimbic cortex layer 6contraPrLL61
Agranular insular cortexcontraAI1
Agranular insular cortex rostral partcontraRAIC1
Dorsal peduncular cortexcontraDP1
Ventrolateral orbital areacontraVLO1
Ventrolateral orbital area layer 6contraVLOL61
Olfactory tubercle polymorph layercontraTuOpo1
Cervical segment 1contraCS14
Intermediomedial cell column C1contraIMMC13
Lateral cervical nucleus C1contraLatCC10.5
Lateral spinal nucleus C1contraLSpC10.5
Spinal cord layers C1contraSCLC12
Area X C1contraSCL10C10.5
Dorsal horn C1contraDHC13
Spinal cord layer 5 C1contraSCL5C11
Spinal cord layer 6 C1contraSCL6C11
Spinal cord layer 4 C1contraSCL4C11
Spinal cord layer 1 C1contraSCL1C10.5
Ventral horn C1contraVHC13
Spinal cord layer 7 C1contraSCL7C11
Spinal cord layer 8 C1contraSCL8C11
Spinal cord layer 9 C1contraSCL9C11
Cervical segment 2contraCS24
Intermediomedial cell column C2contraIMMC23
Lateral cervical nucleus C2contraLatCC20.5
Lateral spinal nucleus C2contraLSpC20.5
Spinal cord layers C2contraSCLC22
Area X C2contraSCL10C20.5
Dorsal horn C2contraDHC23
Spinal cord layer 5 C2contraSCL5C21
Spinal cord layer 6 C2contraSCL6C21
Spinal cord layer 4 C2contraSCL4C21
Spinal cord layer 1 C2contraSCL1C20.5
Ventral horn C2contraVHC23
Spinal cord layer 7 C2contraSCL7C21
Spinal cord layer 8 C2contraSCL8C21
Spinal cord layer 9 C2contraSCL9C21
Cervical segment 3contraCS33
Spinal cord layers C3contraSCLC32
Spinal cord layer 5 C3contraSCL5C31
Spinal cord layer 6 C3contraSCL6C31
Spinal cord layer 4 C3contraSCL4C31
Spinal cord layer 7 C3contraSCL7C31
Spinal cord layer 8 C3contraSCL8C31
Spinal cord layer 9 C3contraSCL9C31
Cervical segment 4contraCS42
Intermediomedial cell column C4contraIMMC43
Lateral cervical nucleus C4contraLatCC40.5
Lateral spinal nucleus C4contraLSpC40.5
Spinal cord layers C4contraSCLC42
Area X C4contraSCL10C40.5
Dorsal horn C4contraDHC43
Spinal cord layer 5 C4contraSCL5C41
Spinal cord layer 6 C4contraSCL6C41
Spinal cord layer 4 C4contraSCL4C41
Spinal cord layer 1 C4contraSCL1C40.5
Ventral horn C4contraVHC43
Spinal cord layer 7 C4contraSCL7C41
Spinal cord layer 8 C4contraSCL8C41
Spinal cord layer 9 C4contraSCL9C41
Cervical segment 5contraCS52
Intermediomedial cell column C5contraIMMC53
Lateral cervical nucleus C5contraLatCC50.5
Lateral spinal nucleus C5contraLSpC50.5
Spinal cord layers C5contraSCLC52
Area X C5contraSCL10C50.5
Dorsal horn C5contraDHC53
Spinal cord layer 1 C5contraSCL1C50.5
Ventral horn C5contraVHC53
Cervical segment 6contraCS61
Spinal cord layers C6contraSCLC62
Cervical segment 7contraCS72
Intermediomedial cell column C7contraIMMC73
Lateral cervical nucleus C7contraLatCC70.5
Lateral spinal nucleus C7contraLSpC70.5
Spinal cord layers C7contraSCLC72
Area X C7contraSCL10C70.5
Dorsal horn C7contraDHC73
Spinal cord layer 5 C7contraSCL5C70.5
Spinal cord layer 6 C7contraSCL6C70.5
Spinal cord layer 3 C7contraSCL3C70.5
Spinal cord layer 4 C7contraSCL4C70.5
Spinal cord layer 1 C7contraSCL1C70.5
Ventral horn C7contraVHC73
Spinal cord layer 7 C7contraSCL7C70.5
Cervical segment 8contraCS82
Intermediomedial cell column C8contraIMMC83
Lateral cervical nucleus C8contraLatCC80.5
Lateral spinal nucleus C8contraLSpC80.5
Spinal cord layers C8contraSCLC82
Area X C8contraSCL10C80.5
Dorsal horn C8contraDHC83
Spinal cord layer 1 C8contraSCL1C80.5
Ventral horn C8contraVHC83
Thoracal segment 1contraT11
Spinal cord layers T1contraSCLT10
Thoracal segment 2contraT21
Spinal cord layers T2contraSCLT20
Thoracal segment 3contraT31
Thoracal segment 4contraT42
Intermediomedial cell column T4contraIMMT43
Lateral spinal nucleus T4contraLSpT40.5
Area X T4contraSCL10T40.5
Dorsal horn T4contraDHT43
Spinal cord layer 1 T4contraSCL1T40.5
Ventral horn T4contraVHT43
Thoracal segment 5contraT50.5
Thoracal segment 6contraT60.5
Intermediomedial cell column T6contraIMMT63
Lateral spinal nucleus T6contraLSpT60.5
Area X T6contraSCL10T60.5
Dorsal horn T6contraDHT63
Spinal cord layer 1 T6contraSCL1T60.5
Ventral horn T6contraVHT63
Thoracal segment 7contraT71
Thoracal segment 8contraT82
Intermediomedial cell column T8contraIMMT83
Lateral spinal nucleus T8contraLSpT80.5
Area X T8contraSCL10T80.5
Dorsal horn T8contraDHT83
Spinal cord layer 1 T8contraSCL1T80.5
Ventral horn T8contraVHT83
Thoracal segment 9contraT92
Thoracal segment 10contraT102
Thoracal segment 11contraT112
Thoracal segment 12contraT122
Intermediomedial cell column T12contraIMMT123
Lateral spinal nucleus T12contraLSpT120.5
Area X T12contraSCL10T120.5
Dorsal horn T12contraDHT123
Spinal cord layer 1 T12contraSCL1T120.5
Ventral horn T12contraVHT123
Thoracal segment 13contraT131
Lumbar segment 1contraL13
Intermediomedial cell column L1contraIMML13
Lateral spinal nucleus L1contraLSpL10.5
Spinal cord layers L1contraSCLL12
Area X L1contraSCL10L10.5
Dorsal horn L1contraDHL13
Spinal cord layer 6 L1contraSCL6L1-0.5
Spinal cord layer 1 L1contraSCL1L10.5
Ventral horn L1contraVHL13
Spinal cord layer 7 L1contraSCL7L1-0.5
Lumbar segment 2contraL23
Intermediomedial cell column L2contraIMML23
Lateral spinal nucleus L2contraLSpL20.5
Spinal cord layers L2contraSCLL22
Area X L2contraSCL10L20.5
Dorsal horn L2contraDHL23
Spinal cord layer 6 L2contraSCL6L2-0.5
Spinal cord layer 1 L2contraSCL1L20.5
Ventral horn L2contraVHL23
Spinal cord layer 7 L2contraSCL7L2-0.5
Lumbar segment 3contraL33
Intermediomedial cell column L3contraIMML33
Lateral spinal nucleus L3contraLSpL30.5
Spinal cord layers L3contraSCLL32
Area X L3contraSCL10L30.5
Dorsal horn L3contraDHL33
Spinal cord layer 6 L3contraSCL6L3-0.5
Spinal cord layer 1 L3contraSCL1L30.5
Ventral horn L3contraVHL33
Spinal cord layer 7 L3contraSCL7L3-0.5
Lumbar segment 4contraL42
Intermediomedial cell column L4contraIMML43
Lateral spinal nucleus L4contraLSpL40.5
Spinal cord layers L4contraSCLL42
Area X L4contraSCL10L40.5
Dorsal horn L4contraDHL43
Spinal cord layer 6 L4contraSCL6L4-0.5
Spinal cord layer 1 L4contraSCL1L40.5
Ventral horn L4contraVHL43
Spinal cord layer 7 L4contraSCL7L4-0.5
Lumbar segment 5contraL52
Intermediomedial cell column L5contraIMML53
Lateral spinal nucleus L5contraLSpL50.5
Spinal cord layers L5contraSCLL52
Area X L5contraSCL10L50.5
Dorsal horn L5contraDHL53
Spinal cord layer 6 L5contraSCL6L5-0.5
Spinal cord layer 1 L5contraSCL1L50.5
Ventral horn L5contraVHL53
Spinal cord layer 7 L5contraSCL7L5-0.5
Lumbar segment 6contraL63
Intermediomedial cell column L6contraIMML63
Lateral spinal nucleus L6contraLSpL60.5
Spinal cord layers L6contraSCLL62
Area X L6contraSCL10L60.5
Dorsal horn L6contraDHL63
Spinal cord layer 6 L6contraSCL6L6-0.5
Spinal cord layer 1 L6contraSCL1L60.5
Ventral horn L6contraVHL63
Spinal cord layer 7 L6contraSCL7L6-0.5
Sacral segment 1contraSa13
Spinal cord layers S1contraSCLS11.5
Sacral segment 2contraSa23
Intermediomedial cell column S2contraIMMS23
Lateral spinal nucleus S2contraLSpS20.5
Area X S2contraSCL10S20.5
Dorsal horn S2contraDHS23
Spinal cord layer 1 S2contraSCL1S20.5
Ventral horn S2contraVHSa23
Sacral segment 3contraSa31
Sacral segment 4contraSa41
Coccygeal segment 1contraCo11
Coccygeal segment 2contraCo21
Coccygeal segment 3contraCo31
LungipsiOrgsLung-10
Trachea sideipsiOrgsTras3

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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