University of Rostock

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Rat connectome



Cor left


Abbreviation
OrgsCor
Color       
Superior regionsCor

SynonymsAbbr.Language
Heart  
CorOrgsCor 

SubregionsSide
Atriumleft
Myocardiumleft
Pericardiumleft
Surface of the heartleft
Epicardiumleft
Anterior coronary sulcus of the heartleft
Anterior interventricular groove of the heartleft
Ventricle of the corleft
Heart baseleft
Cardiac parasympathetic ganglialeft
Atrium pulmonary vein junctionleft
Inferior cava atrium junctionleft

Output to

NameSideAbbr.WeightDetails
Area postremaipsiAP0
Nucleus of the solitary tractipsiSol-0.5
Nucleus of the solitary tract commissural partipsiSolC3
Nucleus of the solitary tract dorsal partipsiSolD0
Nucleus of the solitary tract dorsolateral partipsiSolDL2
Nucleus of the solitary tract intermediate partipsiSolIM0
Nucleus of the solitary tract interstitial partipsiSoli0
Dorsal division of the medial solitary nucleusipsiSolMD3
Nucleus of the solitary tract medial part ventral zoneipsiSolMv3
Nucleus of the solitary tract ventral partipsiSolV0
Nucleus of the solitary tract ventrolateral partipsiSolVL3
Dorsal root ganglion C1ipsiDRGC1-0.5
Dorsal root ganglion C2ipsiDRGC2-0.5
Dorsal root ganglion C3ipsiDRGC3-0.5
Dorsal root ganglion C4ipsiDRGC4-0.5
Dorsal root ganglion C5ipsiDRGC5-0.5
Dorsal root ganglion C6ipsiDRGC6-0.5
Dorsal root ganglion C7ipsiDRGC7-0.5
Dorsal root ganglion C8ipsiDRGC8-0.5
Nucleus of the solitary tract commissural partcontraSolC-0.5
Nucleus of the solitary tract dorsolateral partcontraSolDL-0.5
Dorsal division of the medial solitary nucleuscontraSolMD-0.5
Nucleus of the solitary tract medial part ventral zonecontraSolMv-0.5
Nucleus of the solitary tract ventrolateral partcontraSolVL-0.5
Superior cervical ganglionipsiAutoSCeG-0.5
Nodose ganglionipsiAutoNoG-2
Vagus nerveipsiAutoV-0.5

Input from

NameSideAbbr.WeightDetails
Central grayipsiCG-0.5
A5 noradrenaline cellsipsiA5-0.5
Locus coeruleusipsiLC-0.5
Rostroventrolateral reticular nucleusipsiRVL-0.5
Koelliker Fuse nucleusipsiKF-0.5
Gigantocellular reticular nucleusipsiGi-10
Lateral reticular nucleusipsiLRt-10
Lateral reticular arcipsiLRta-10
Subcoeruleus nucleusipsiSubC-0.5
C1 adrenaline cellsipsiC1-0.5
C3 adrenaline cellsipsiC3-0.5
Ambiguus nucleusipsiAmb-0.5
Ambiguus nucleus compact partipsiAmbC3
Ambiguus nucleus external formationipsiAmbEx3
Rostral portion of the external formation of the nucleus ambiguusipsiAmbREx-0.5
Caudal portion of the external formation of the nucleus ambiguusipsiAmbCEx-0.5
Ambiguus nucleus preganglionar cardial vagal neuronsipsiAmbcarp-0.5
Area postremaipsiAP-10
Trigeminal nucleusipsi5-0.5
Nucleus of the solitary tractipsiSol-0.5
Nucleus of the solitary tract commissural partipsiSolC-10
Nucleus of the solitary tract dorsal partipsiSolD-10
Nucleus of the solitary tract dorsomedial partipsiSolDM-10
Nucleus of the solitary tract interstitial partipsiSoli-10
Nucleus of the solitary tract ventral partipsiSolV-10
Dorsal motor nucleus of vagusipsi101.5
Cardial vagal preganglionic neuronsipsi10cpg-0.5
Preganglionic cardiac vagal neuronsipsi10Spcn-0.5
Raphe magnus nucleusipsiRMg-0.5
Raphe obscurus nucleusipsiROb-0.5
Raphe pallidus nucleusipsiRPa-0.5
Rostral ventrolateral medullaipsiRVLM-0.5
A1 noradrenergic cellsipsiA1-0.5
Caudoventral reticular nucleusipsiCVL-0.5
Intermediate zone between the nucleus ambiguus and the dorsal motor nucleus of the vagusipsiIZAmb101
Paragigantocellular reticular nucleusipsiPGi-10
Lateral paragigantocellular nucleusipsiLPGi-0.5
Arcuate nucleusipsiArc-0.5
Paraventricular hypothalamic nucleusipsiPa-0.5
Accumbens nucleusipsiAc-0.5
Lateral cervical nucleus C1ipsiLatCC1-0.5
Area X C1ipsiSCL10C1-0.5
Lateral cervical nucleus C2ipsiLatCC2-0.5
Area X C2ipsiSCL10C2-0.5
Lateral cervical nucleus C3ipsiLatCC3-0.5
Area X C3ipsiSCL10C3-0.5
Lateral cervical nucleus C4ipsiLatCC4-0.5
Area X C4ipsiSCL10C4-0.5
Lateral cervical nucleus C5ipsiLatCC5-0.5
Area X C5ipsiSCL10C5-0.5
Lateral cervical nucleus C6ipsiLatCC6-0.5
Area X C6ipsiSCL10C6-0.5
Lateral cervical nucleus C7ipsiLatCC7-0.5
Area X C7ipsiSCL10C7-0.5
Lateral cervical nucleus C8ipsiLatCC8-0.5
Area X C8ipsiSCL10C8-0.5
Intermediolateral cell column T1ipsiIMLT12
Lateral spinal nucleus T1ipsiLSpT11
Area X T1ipsiSCL10T1-0.5
Spinal cord layer 5 T1ipsiSCL5T1-0.5
Spinal cord layer 4 T1ipsiSCL4T1-0.5
Spinal cord layer 1 T1ipsiSCL1T1-0.5
Spinal cord layer 2 T1ipsiSCL2T1-0.5
Spinal cord layer 7 T1ipsiSCL7T1-0.5
Intermediolateral cell column T2ipsiIMLT22
Lateral spinal nucleus T2ipsiLSpT21
Area X T2ipsiSCL10T2-0.5
Spinal cord layer 5 T2ipsiSCL5T2-0.5
Spinal cord layer 4 T2ipsiSCL4T2-0.5
Spinal cord layer 1 T2ipsiSCL1T2-0.5
Spinal cord layer 2 T2ipsiSCL2T2-0.5
Spinal cord layer 7 T2ipsiSCL7T2-0.5
Intermediolateral cell column T3ipsiIMLT32
Lateral spinal nucleus T3ipsiLSpT31
Area X T3ipsiSCL10T3-0.5
Spinal cord layer 5 T3ipsiSCL5T3-0.5
Spinal cord layer 4 T3ipsiSCL4T3-0.5
Spinal cord layer 1 T3ipsiSCL1T3-0.5
Spinal cord layer 2 T3ipsiSCL2T3-0.5
Spinal cord layer 7 T3ipsiSCL7T3-0.5
Intermediolateral cell column T4ipsiIMLT42
Lateral spinal nucleus T4ipsiLSpT41
Area X T4ipsiSCL10T4-0.5
Spinal cord layer 5 T4ipsiSCL5T4-0.5
Spinal cord layer 4 T4ipsiSCL4T4-0.5
Spinal cord layer 1 T4ipsiSCL1T4-0.5
Spinal cord layer 2 T4ipsiSCL2T4-0.5
Spinal cord layer 7 T4ipsiSCL7T4-0.5
Intermediolateral cell column T5ipsiIMLT52
Lateral spinal nucleus T5ipsiLSpT51
Area X T5ipsiSCL10T5-0.5
Spinal cord layer 5 T5ipsiSCL5T5-0.5
Spinal cord layer 4 T5ipsiSCL4T5-0.5
Spinal cord layer 1 T5ipsiSCL1T5-0.5
Spinal cord layer 2 T5ipsiSCL2T5-0.5
Spinal cord layer 7 T5ipsiSCL7T5-0.5
Intermediolateral cell column T6ipsiIMLT62
Lateral spinal nucleus T6ipsiLSpT61
Area X T6ipsiSCL10T6-0.5
Spinal cord layer 5 T6ipsiSCL5T6-0.5
Spinal cord layer 4 T6ipsiSCL4T6-0.5
Spinal cord layer 1 T6ipsiSCL1T6-0.5
Spinal cord layer 2 T6ipsiSCL2T6-0.5
Spinal cord layer 7 T6ipsiSCL7T6-0.5
Intermediolateral cell column T7ipsiIMLT72
Lateral spinal nucleus T7ipsiLSpT71
Area X T7ipsiSCL10T7-0.5
Spinal cord layer 5 T7ipsiSCL5T7-0.5
Spinal cord layer 4 T7ipsiSCL4T7-0.5
Spinal cord layer 1 T7ipsiSCL1T7-0.5
Spinal cord layer 2 T7ipsiSCL2T7-0.5
Spinal cord layer 7 T7ipsiSCL7T7-0.5
Intermediolateral cell column T8ipsiIMLT82
Lateral spinal nucleus T8ipsiLSpT81
Area X T8ipsiSCL10T8-0.5
Spinal cord layer 5 T8ipsiSCL5T8-0.5
Spinal cord layer 4 T8ipsiSCL4T8-0.5
Spinal cord layer 1 T8ipsiSCL1T8-0.5
Spinal cord layer 2 T8ipsiSCL2T8-0.5
Spinal cord layer 7 T8ipsiSCL7T8-0.5
Intermediolateral cell column T9ipsiIMLT92
Lateral spinal nucleus T9ipsiLSpT91
Area X T9ipsiSCL10T9-0.5
Spinal cord layer 5 T9ipsiSCL5T9-0.5
Spinal cord layer 4 T9ipsiSCL4T9-0.5
Spinal cord layer 1 T9ipsiSCL1T9-0.5
Spinal cord layer 2 T9ipsiSCL2T9-0.5
Spinal cord layer 7 T9ipsiSCL7T9-0.5
Intermediolateral cell column T10ipsiIMLT102
Lateral spinal nucleus T10ipsiLSpT101
Area X T10ipsiSCL10T10-0.5
Spinal cord layer 5 T10ipsiSCL5T10-0.5
Spinal cord layer 4 T10ipsiSCL4T10-0.5
Spinal cord layer 1 T10ipsiSCL1T10-0.5
Spinal cord layer 2 T10ipsiSCL2T10-0.5
Spinal cord layer 7 T10ipsiSCL7T10-0.5
Intermediolateral cell column T11ipsiIMLT112
Lateral spinal nucleus T11ipsiLSpT111
Area X T11ipsiSCL10T11-0.5
Spinal cord layer 5 T11ipsiSCL5T11-0.5
Spinal cord layer 4 T11ipsiSCL4T11-0.5
Spinal cord layer 1 T11ipsiSCL1T11-0.5
Spinal cord layer 2 T11ipsiSCL2T11-0.5
Spinal cord layer 7 T11ipsiSCL7T11-0.5
Intermediolateral cell column T12ipsiIMLT122
Lateral spinal nucleus T12ipsiLSpT121
Area X T12ipsiSCL10T12-0.5
Spinal cord layer 5 T12ipsiSCL5T12-0.5
Spinal cord layer 4 T12ipsiSCL4T12-0.5
Spinal cord layer 1 T12ipsiSCL1T12-0.5
Spinal cord layer 2 T12ipsiSCL2T12-0.5
Spinal cord layer 7 T12ipsiSCL7T12-0.5
Intermediolateral cell column T13ipsiIMLT132
Lateral spinal nucleus T13ipsiLSpT131
Area X T13ipsiSCL10T13-0.5
Spinal cord layer 5 T13ipsiSCL5T13-0.5
Spinal cord layer 4 T13ipsiSCL4T13-0.5
Spinal cord layer 1 T13ipsiSCL1T13-0.5
Spinal cord layer 2 T13ipsiSCL2T13-0.5
Spinal cord layer 7 T13ipsiSCL7T13-0.5
Spinal cord layer 5 L1ipsiSCL5L1-0.5
Spinal cord layer 6 L1ipsiSCL6L1-0.5
Spinal cord layer 4 L1ipsiSCL4L1-0.5
Spinal cord layer 7 L1ipsiSCL7L1-0.5
Spinal cord layer 5 L2ipsiSCL5L2-0.5
Spinal cord layer 6 L2ipsiSCL6L2-0.5
Spinal cord layer 4 L2ipsiSCL4L2-0.5
Spinal cord layer 7 L2ipsiSCL7L2-0.5
Spinal cord layer 5 L3ipsiSCL5L3-0.5
Spinal cord layer 6 L3ipsiSCL6L3-0.5
Spinal cord layer 4 L3ipsiSCL4L3-0.5
Spinal cord layer 7 L3ipsiSCL7L3-0.5
Spinal cord layer 5 L4ipsiSCL5L4-0.5
Spinal cord layer 6 L4ipsiSCL6L4-0.5
Spinal cord layer 4 L4ipsiSCL4L4-0.5
Spinal cord layer 7 L4ipsiSCL7L4-0.5
Spinal cord layer 5 L5ipsiSCL5L5-0.5
Spinal cord layer 6 L5ipsiSCL6L5-0.5
Spinal cord layer 4 L5ipsiSCL4L5-0.5
Spinal cord layer 7 L5ipsiSCL7L5-0.5
Spinal cord layer 5 L6ipsiSCL5L6-0.5
Spinal cord layer 6 L6ipsiSCL6L6-0.5
Spinal cord layer 4 L6ipsiSCL4L6-0.5
Spinal cord layer 7 L6ipsiSCL7L6-0.5
Area X S1ipsiSCL10S1-0.5
Spinal cord layer 5 S1ipsiSCL5S1-0.5
Spinal cord layer 6 S1ipsiSCL6S1-0.5
Spinal cord layer 4 S1ipsiSCL4S1-0.5
Spinal cord layer 7 S1ipsiSCL7S1-0.5
Area X S2ipsiSCL10S2-0.5
Spinal cord layer 5 S2ipsiSCL5S2-0.5
Spinal cord layer 6 S2ipsiSCL6S2-0.5
Spinal cord layer 4 S2ipsiSCL4S2-0.5
Spinal cord layer 7 S2ipsiSCL7S2-0.5
Area X S3ipsiSCL10S3-0.5
Spinal cord layer 5 S3ipsiSCL5S3-0.5
Spinal cord layer 6 S3ipsiSCL6S3-0.5
Spinal cord layer 4 S3ipsiSCL4S3-0.5
Spinal cord layer 7 S3ipsiSCL7S3-0.5
Area X S4ipsiSCL10S4-0.5
Spinal cord layer 5 S4ipsiSCL5S4-0.5
Spinal cord layer 6 S4ipsiSCL6S4-0.5
Spinal cord layer 4 S4ipsiSCL4S4-0.5
Spinal cord layer 7 S4ipsiSCL7S4-0.5
Ambiguus nucleus external formationcontraAmbEx3
Rostral portion of the external formation of the nucleus ambiguuscontraAmbREx-0.5
Caudal portion of the external formation of the nucleus ambiguuscontraAmbCEx-0.5
Dorsal motor nucleus of vaguscontra101.5
Intermediate zone between the nucleus ambiguus and the dorsal motor nucleus of the vaguscontraIZAmb101
Stellate ganglionipsiAutoSteG4
Ventromedial edge of the stellate ganglionipsiAutoSteGvm-0.5
Superior cervical ganglionipsiAutoSCeG1
Lumbar sympathetic ganglia level L 2ipsiAutoLSGL2-0.5
Lumbar sympathetic ganglia level L 3ipsiAutoLSGL3-0.5
Lumbar sympathetic ganglia level L 4ipsiAutoLSGL4-0.5
Lumbar sympathetic ganglia level L 5ipsiAutoLSGL5-0.5
Lumbar sympathetic ganglia level L 6ipsiAutoLSGL6-0.5
Thoracic sympathetic ganglion at level T 4ipsiAutoTSG41
Nodose ganglionipsiAutoNoG-10
Medial aspect of the nodose ganglionipsiAutomNoG-10
Cervical vagus nerveipsi10Cerv-0.5
Thoracic sympathetic ganglion at level T 4contraAutoTSG41
Lumbar sympathetic ganglia level L 2contraAutoLSGL2-0.5
Lumbar sympathetic ganglia level L 3contraAutoLSGL3-0.5
Lumbar sympathetic ganglia level L 4contraAutoLSGL4-0.5
Lumbar sympathetic ganglia level L 5contraAutoLSGL5-0.5
Lumbar sympathetic ganglia level L 6contraAutoLSGL6-0.5
Stellate ganglioncontraAutoSteG3
Superior cervical ganglioncontraAutoSCeG0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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