University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Oesophagus left


Abbreviation
OrgsOes
Color       
Superior regionsGastrointestinal tract

SynonymsAbbr.Language
OesophagusOrgsOesEng
Esophagus  
Esophageal wall Eng

SubregionsSide
Cervical oesophagusleft
Intraganglionic laminar endingsleft
Oesophageal sphincter myenteric ganglialeft
Oesophagus motor endplatesleft
Oesophagus myenteric ganglionleft
Oesophagus proximal partleft
Oesophagus subserous ganglialeft
Subdiaphragmatic oesophagusleft
Esophagogastric sphincterleft
Esophagus muscle layerleft
Esophagus mucous layerleft
Esophagus myenteric plexusleft
Cranial part of esophagusleft
Thoracic oesophagusleft
Abdominal oesophagusleft
Oesophageal wallleft
Oesophagus distal partleft

Output to

NameSideAbbr.WeightDetails
MyelencephalonipsiMYC-0.5
Ambiguus nucleus compact partipsiAmbC0
Nucleus of the solitary tractipsiSol-0.5
Nucleus of the solitary tract central partipsiSolCe3
Nucleus of the solitary tract commissural partipsiSolC-2
Nucleus of the solitary tract intermediate partipsiSolIM3
Nucleus of the solitary tract interstitial partipsiSoli4
Solitary tractipsisol-2
Dorsal root ganglion C1ipsiDRGC11
Dorsal root ganglion C2ipsiDRGC21
Dorsal root ganglion C3ipsiDRGC31
Dorsal root ganglion C4ipsiDRGC43
Dorsal root ganglion C5ipsiDRGC51
Dorsal root ganglion C6ipsiDRGC61
Dorsal root ganglion C7ipsiDRGC71
Dorsal root ganglion C8ipsiDRGC81
Dorsal root ganglion T1ipsiDRGT11
Dorsal root ganglion T2ipsiDRGT2-0.5
Dorsal root ganglion T3ipsiDRGT3-0.5
Dorsal root ganglion T6ipsiDRGT6-0.5
Dorsal root ganglion T7ipsiDRGT7-0.5
Dorsal root ganglion T8ipsiDRGT8-0.5
Dorsal root ganglion T9ipsiDRGT9-0.5
Dorsal root ganglion T10ipsiDRGT10-0.5
Dorsal root ganglion T11ipsiDRGT11-0.5
Dorsal root ganglion T12ipsiDRGT12-0.5
MyelencephaloncontraMYC-0.5
Nucleus of the solitary tract central partcontraSolCe2
Nucleus of the solitary tract intermediate partcontraSolIM2
Nucleus of the solitary tract interstitial partcontraSoli1
Jugular ganglionipsiAutoJG-0.5
Petrosal ganglionipsiAutoPetroG-0.5
Nodose ganglionipsiAutoNoG2
Celiac branch of vagusipsiAutoCeB-2
Jugular ganglioncontraAutoJG-0.5
Petrosal ganglioncontraAutoPetroG-0.5
Nodose ganglioncontraAutoNoG-0.5

Input from

NameSideAbbr.WeightDetails
Ambiguus nucleusipsiAmb3
Ambiguus nucleus compact partipsiAmbC3
Ambiguus nucleus external formationipsiAmbEx-0.5
Ambiguus nucleus semicompact formationipsiAmbSeC-0.5
Ambiguus nucleus oesophageal motoneuronsipsiAmbomn-0.5
Nucleus of the solitary tractipsiSol-0.5
Dorsal motor nucleus of vagusipsi100
Dorsal motor nucleus of vagus rostral partipsi10R1
Preganglionic parasympathetic neurons of the dorsal motor nucleus of vagusipsi10pgp-0.5
Retinal ganglion cellsipsiRETg-0.5
Ambiguus nucleus compact partcontraAmbC3
Nodose ganglionipsiAutoNoG-0.5
Vagus nerveipsiAutoV-0.5
Recurrent laryngeal nerveipsireLa-2
Nodose ganglioncontraAutoNoG-0.5
Recurrent laryngeal nervecontrareLa-2

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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