University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Colon right


Abbreviation
OrgsColonS
Color       
Superior regionsGut

SynonymsAbbr.Language
ColonOrgsColonSEng

SubregionsSide
Colon ascendingright
Colon descendingright
Colon sigmoideumright
Colon myenteric plexusright
Colon submucosus plexusright
Colon middleright
Colon serosal plexusright
Colon transverse myenteric plexusright
Submucosal layer of the colonic wallright
Ventral wall of the colonright
Colon dorsally adjacent to uterine body-cervix regionright
Colon at the same rostrocaudal level as uterine hornsright

Output to

NameSideAbbr.WeightDetails
Nucleus of the solitary tractcontraSol-0.5
Nucleus of the solitary tract commissural partcontraSolC-0.5
Nucleus of the solitary tract medial partcontraSolM-0.5
Dorsal motor nucleus of vaguscontra10-0.5
Lumbar segment 6contraL6-0.5
Spinal cord layer 1 L6contraSCL1L6-0.5
Sacral segment 1contraSa1-0.5
Spinal cord layer 1 S1contraSCL1S1-0.5
Nucleus of the solitary tractipsiSol-0.5
Nucleus of the solitary tract commissural partipsiSolC-0.5
Nucleus of the solitary tract medial partipsiSolM-0.5
Dorsal motor nucleus of vagusipsi10-0.5
Dorsal root ganglion T12ipsiDRGT12-0.5
Dorsal root ganglion T13ipsiDRGT13-0.5
Dorsal root ganglion L1ipsiDRGL1-0.5
Dorsal root ganglion L2ipsiDRGL2-0.5
Dorsal root ganglion L3ipsiDRGL3-0.5
Dorsal root ganglion L4ipsiDRGL4-0.5
Dorsal root ganglion L5ipsiDRGL5-0.5
Lumbar segment 6ipsiL6-0.5
Dorsal root ganglion L6ipsiDRGL6-0.5
Spinal cord layer 1 L6ipsiSCL1L6-0.5
Sacral segment 1ipsiSa1-0.5
Dorsal root ganglion S1ipsiDRGS1-0.5
Spinal cord layer 1 S1ipsiSCL1S1-0.5
Dorsal root ganglion S2ipsiDRGS2-1
Dorsal root ganglion S3ipsiDRGS3-2
Dorsal root gangliaipsiDRG-0.5

Input from

NameSideAbbr.WeightDetails
Nucleus of the solitary tractcontraSol-0.5
Dorsal motor nucleus of vaguscontra10-0.5
Periaqueductal grayipsiPAG2
Red nucleusipsiR2
Edinger Westphal nucleusipsiEW2
A5 noradrenaline cellsipsiA53
A7 noradrenaline cellsipsiA72
Barringtons nucleusipsiBar3
Locus coeruleusipsiLC2
Parabrachial nucleusipsiPB1
Lateral reticular nucleusipsiLRt3
Medullary reticular nucleusipsiMdD-10
Subcoeruleus nucleusipsiSubC2
C1 adrenaline cellsipsiC13
Ambiguus nucleusipsiAmb2
Area postremaipsiAP3
Nucleus of the solitary tractipsiSol3
Dorsal motor nucleus of vagusipsi103
Raphe nucleiipsiRAN3
Raphe magnus nucleusipsiRMg-10
Inferior oliveipsiIO2
Ventromedial medulla oblongataipsiMeObvm-10
Lateral hypothalamic nucleusipsiLHN1
Paraventricular hypothalamic nucleusipsiPa3
Supraoptic hypothalamic partipsiSOHYP1
Dorsal root ganglion T8ipsiDRGT81
Intercalated nucleus T8ipsiIClT80.5
Intermediolateral cell column T8ipsiIMLT81
Dorsal horn T8ipsiDHT80.5
Superficial dorsal horn T8ipsiSDHT83
Dorsal root ganglion T9ipsiDRGT91
Dorsal root ganglion T10ipsiDRGT101
Dorsal root ganglion T11ipsiDRGT111
Dorsal root ganglion T12ipsiDRGT121
Dorsal root ganglion T13ipsiDRGT131
Dorsal root ganglion L1ipsiDRGL13
Intermediolateral cell column L1ipsiIMLL13
Lumbar parasympathetic nucleus L1ipsiLPSyL13
Lumbar dorsal commissural nucleus L1ipsiLDComL12
Dorsal horn L1ipsiDHL10.5
Superficial dorsal horn L1ipsiSDHL13
Dorsal root ganglion L2ipsiDRGL23
Dorsal root ganglion L3ipsiDRGL31
Lumbar dorsal commissural nucleus L3ipsiLDComL30.5
Dorsal root ganglion L4ipsiDRGL41
Lumbar dorsal commissural nucleus L4ipsiLDComL40.5
Dorsal root ganglion L5ipsiDRGL51
Intermediolateral cell column L5ipsiIMLL50.5
Lumbar parasympathetic nucleus L5ipsiLPSyL50.5
Lumbar dorsal commissural nucleus L5ipsiLDComL51
Dorsal horn L5ipsiDHL50.5
Superficial dorsal horn L5ipsiSDHL53
Dorsal root ganglion L6ipsiDRGL63
Intermediolateral cell column L6ipsiIMLL61
Lumbar parasympathetic nucleus L6ipsiLPSyL61
Lumbar dorsal commissural nucleus L6ipsiLDComL62
Superficial dorsal horn L6ipsiSDHL63
Lateral dorsal horn L6ipsiLDHL60.5
Medial dorsal horn L6ipsiMDHL60.5
Dorsal root ganglion S1ipsiDRGS13
Intermediolateral cell column S1ipsiIMLS13
Sacral dorsal commissural nucleus S1ipsiSDComS12
Sacral parasympathetic nucleus S1ipsiSPSyS13
Dorsal horn S1ipsiDHS10.5
Superficial dorsal horn S1ipsiSDHS13
Dorsal root ganglion S2ipsiDRGS21
Sacral dorsal commissural nucleus S2ipsiSDComS20.5
Pelvic ganglionipsiAutoPeG-0.5
Dorsal major pelvic ganglionipsiAutoDPeG-0.5
Nodose ganglionipsiAutoNoG3
Colon myenteric plexusipsiOrgsColonSmy-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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