University of Rostock

Department of Anatomy

Neuroscience Group

 Homepage

 Staff

 neuroVIISAS

 Rat connectome

 Other connectomes

 Neuroimaging

 Neurodegeneration

 Neuroproteomics

 Students

 Links

 Publications

Rat connectome



Red nucleus right


Abbreviation
R
Color       
Superior regionsMesencephalon

SynonymsAbbr.Language
 RN 
Red nucleusRnEng
Rubral field Eng
Nucleus ruber Eng
Red nucleusREng

SubregionsSide
Border of the red nucleusright
Middle third of the red nucleusright
Nucleus poper of the red nucleusright
Pararubral nucleusright
Prerubral fieldright
Red nucleus caudal partright
Red nucleus dorsalright
Red nucleus dorsolateral partright
Red nucleus dorsomedial partright
Red nucleus intermediary partright
Red nucleus lateral hornright
Red nucleus lateral partright
Red nucleus magnocellular partright
Red nucleus medial partright
Red nucleus medioventralright
Red nucleus midportionright
Red nucleus parvicellular partright
Red nucleus rostral partright
Red nucleus ventral partright
Red nucleus ventrolateral partright
Magnocellular parvicellular border zone of the red nucleusright
Red nucleus hindlimb regionright
Rostromedial red nucleusright
Red nucleus compact partright
Red nucleus rostrocaudal partright
Central portion of the red nucleusright

Output to

NameSideAbbr.WeightDetails
Lateral tegmental field retroambigual areacontraLTfr1
Granule cell layer of the cerebellumcontraGrCb-0.5
Interposed cerebellar nucleicontraICN3
Anterior interposed nucleuscontraAIN-0.5
Interposed cerebellar nuclei rostral partcontraICNR-0.5
Pontine reticular nucleuscontraPRN0
Peribrachial regioncontraPBR2
Lateral reticular nucleuscontraLRt-0.5
Caudal two third of the lateral reticular nucleuscontraCaTTLRt0
Lateral part of the rostral magnocellular lateral reticular nucleuscontraLLRtMC1
Lateral reticular nucleus subtrigeminal partcontraLRtS51
Medullary reticular nucleus dorsal partcontraMdDd4
Ambiguus nucleuscontraAmb-0.5
Abducens systemcontra6S3
Facial nucleuscontra73
Facial nucleus dorsolateral subnucleuscontra7DL2
Facial nucleus lateral subnucleuscontra7L3
Facial nucleus medial partcontra7M2
Facial nucleus ventral partcontra7V3
Facial nucleus dorsal intermediate subnucleuscontra7DI1
Intertrigeminal nucleuscontraI53
Motor trigeminal nucleuscontraMo50
Motor trigeminal nucleus ventral partcontraMo5V-0.5
Principal sensory trigeminal nucleus caudal partcontraPr5ca-0.5
Raphe pallidus nucleuscontraRPa4
Cuneate nucleuscontraCu1
Subretrofacial nucleuscontraSuReFa2
Ventromedial medulla oblongatacontraMeObvm3
Zona incertacontraZI1
Dorsolateral funiculuscontradlft3
Lateral funiclecontralfunc-10
Primary somatosensory cortex barrel fieldcontraS1BF0
Primary somatosensory cortex forelimb regioncontraS1FL0
Spinal cordcontraMES-0.5
Rubrospinal tractcontrars-2
Spinal cord lamina 5contraMESL5-0.5
Spinal cord lamina 6contraMESL6-0.5
Spinal cord lamina 7contraMESL7-0.5
Cervical segmentscontraCSeg-0.5
Cervical segment 1contraCS12
Spinal cord layers C1contraSCLC13
Spinal cord layer 5 C1contraSCL5C10.5
Spinal cord layer 6 C1contraSCL6C10.5
Spinal cord layer 7 C1contraSCL7C10.5
Cervical segment 2contraCS22
Spinal cord layers C2contraSCLC23
Spinal cord layer 5 C2contraSCL5C20.5
Spinal cord layer 6 C2contraSCL6C20.5
Spinal cord layer 7 C2contraSCL7C20.5
Cervical segment 3contraCS32
Spinal cord layers C3contraSCLC33
Spinal cord layer 5 C3contraSCL5C30.5
Spinal cord layer 6 C3contraSCL6C30.5
Spinal cord layer 7 C3contraSCL7C30.5
Cervical segment 4contraCS42
Spinal cord layers C4contraSCLC43
Spinal cord layer 5 C4contraSCL5C40.5
Spinal cord layer 6 C4contraSCL6C40.5
Spinal cord layer 7 C4contraSCL7C40.5
Cervical segment 5contraCS53
Intermediomedial cell column C5contraIMMC53
Spinal cord layers C5contraSCLC53
Dorsal horn C5contraDHC53
Spinal cord layer 5 C5contraSCL5C50.5
Spinal cord layer 6 C5contraSCL6C50.5
Ventral horn C5contraVHC54
Spinal cord layer 7 C5contraSCL7C50.5
Cervical segment 6contraCS63
Spinal cord layers C6contraSCLC63
Dorsal horn C6contraDHC63
Spinal cord layer 5 C6contraSCL5C60.5
Spinal cord layer 6 C6contraSCL6C60.5
Ventral horn C6contraVHC64
Spinal cord layer 7 C6contraSCL7C60.5
Spinal cord layer 9 C6contraSCL9C6-0.5
Cervical segment 7contraCS73
Spinal cord layers C7contraSCLC73
Dorsal horn C7contraDHC73
Spinal cord layer 5 C7contraSCL5C70.5
Spinal cord layer 6 C7contraSCL6C70.5
Ventral horn C7contraVHC74
Spinal cord layer 7 C7contraSCL7C70.5
Spinal cord layer 9 C7contraSCL9C7-0.5
Cervical segment 8contraCS83
Spinal cord layers C8contraSCLC83
Dorsal horn C8contraDHC83
Spinal cord layer 5 C8contraSCL5C80.5
Spinal cord layer 6 C8contraSCL6C80.5
Ventral horn C8contraVHC84
Spinal cord layer 7 C8contraSCL7C80.5
Spinal cord layer 9 C8contraSCL9C8-0.5
Thoracal segment 1contraT13
Spinal cord layer 5 T1contraSCL5T10.5
Spinal cord layer 6 T1contraSCL6T10.5
Spinal cord layer 7 T1contraSCL7T10.5
Spinal cord layer 9 T1contraSCL9T1-0.5
Spinal cord layer 5 T2contraSCL5T20.5
Spinal cord layer 6 T2contraSCL6T20.5
Spinal cord layer 7 T2contraSCL7T20.5
Spinal cord layer 5 T3contraSCL5T30.5
Spinal cord layer 6 T3contraSCL6T30.5
Spinal cord layer 7 T3contraSCL7T30.5
Spinal cord layer 5 T4contraSCL5T40.5
Spinal cord layer 6 T4contraSCL6T40.5
Spinal cord layer 7 T4contraSCL7T40.5
Spinal cord layer 5 T5contraSCL5T50.5
Spinal cord layer 6 T5contraSCL6T50.5
Spinal cord layer 7 T5contraSCL7T50.5
Thoracal segment 6contraT63
Spinal cord layer 5 T6contraSCL5T60.5
Spinal cord layer 6 T6contraSCL6T60.5
Spinal cord layer 7 T6contraSCL7T60.5
Thoracal segment 7contraT7-0.5
Spinal cord layer 5 T7contraSCL5T70.5
Spinal cord layer 6 T7contraSCL6T70.5
Spinal cord layer 7 T7contraSCL7T70.5
Thoracal segment 8contraT8-0.5
Spinal cord layer 5 T8contraSCL5T80.5
Spinal cord layer 6 T8contraSCL6T80.5
Spinal cord layer 7 T8contraSCL7T80.5
Spinal cord layer 5 T9contraSCL5T90.5
Spinal cord layer 6 T9contraSCL6T90.5
Spinal cord layer 7 T9contraSCL7T90.5
Spinal cord layer 5 T10contraSCL5T100.5
Spinal cord layer 6 T10contraSCL6T100.5
Spinal cord layer 7 T10contraSCL7T100.5
Spinal cord layer 5 T11contraSCL5T110.5
Spinal cord layer 6 T11contraSCL6T110.5
Spinal cord layer 7 T11contraSCL7T110.5
Spinal cord layer 5 T12contraSCL5T120.5
Spinal cord layer 6 T12contraSCL6T120.5
Spinal cord layer 7 T12contraSCL7T120.5
Spinal cord layer 5 T13contraSCL5T130.5
Spinal cord layer 6 T13contraSCL6T130.5
Spinal cord layer 7 T13contraSCL7T130.5
Lumbar segment 1contraL1-0.5
Spinal cord layer 5 L1contraSCL5L13
Spinal cord layer 6 L1contraSCL6L13
Spinal cord layer 7 L1contraSCL7L10.5
Lumbar segment 2contraL2-0.5
Spinal cord layer 5 L2contraSCL5L23
Spinal cord layer 6 L2contraSCL6L23
Spinal cord layer 7 L2contraSCL7L20.5
Lumbar segment 3contraL3-0.5
Spinal cord layer 5 L3contraSCL5L33
Spinal cord layer 6 L3contraSCL6L33
Spinal cord layer 7 L3contraSCL7L30.5
Lumbar segment 4contraL4-0.5
Spinal cord layer 5 L4contraSCL5L43
Spinal cord layer 6 L4contraSCL6L43
Spinal cord layer 7 L4contraSCL7L40.5
Lumbar segment 5contraL52
Spinal cord layer 5 L5contraSCL5L50.5
Spinal cord layer 6 L5contraSCL6L50.5
Spinal cord layer 7 L5contraSCL7L50.5
Lumbar segment 6contraL62
Lumbar parasympathetic nucleus L6contraLPSyL6-0.5
Spinal cord layer 5 L6contraSCL5L60.5
Spinal cord layer 6 L6contraSCL6L60.5
Spinal cord layer 7 L6contraSCL7L60.5
Sacral segment 1contraSa1-0.5
Sacral parasympathetic nucleus S1contraSPSyS1-0.5
Spinal cord layer 5 S1contraSCL5S10.5
Spinal cord layer 6 S1contraSCL6S10.5
Spinal cord layer 7 S1contraSCL7S10.5
Sacral segment 2contraSa2-0.5
Spinal cord layer 5 S2contraSCL5S20.5
Spinal cord layer 6 S2contraSCL6S20.5
Spinal cord layer 7 S2contraSCL7S20.5
Sacral segment 3contraSa3-0.5
Spinal cord layer 5 S3contraSCL5S30.5
Spinal cord layer 6 S3contraSCL6S30.5
Spinal cord layer 7 S3contraSCL7S30.5
Sacral segment 4contraSa4-0.5
Spinal cord layer 5 S4contraSCL5S40.5
Spinal cord layer 6 S4contraSCL6S40.5
Spinal cord layer 7 S4contraSCL7S40.5
Spinal gray mattercontraSGM2
Ventral horn of spinal cordcontraVHMES3
Red nucleusipsiR1
Prerubral fieldipsiPR-0.5
Region around fasciculus reflexusipsiRAfr-0.5
Inferior colliculusipsiICOL3
Substantia nigra A9ipsiSN1
Substantia nigra compact partipsiSNC1
Rostral substantia nigra dorsal partipsiSNrd1
Ventral tegmental area A10ipsiVTA3
Interfascicular nucleusipsiIF1.5
Caudal linear nucleus of the rapheipsiCLi0
Edinger Westphal nucleusipsiEW-1
Lateral edge of the interstitial nucleus of CajalipsiLInC-0.5
Reticular systemipsiRF1
Mesencephalic reticular formationipsiMRF3
Pontine reticular nucleusipsiPRN3
Lateral reticular nucleusipsiLRt4
Lateral one-third of the caudal half of the lateral reticular nucleusipsiLoTChLRt0
Lateral aspect of the caudal pole of the lateral reticular nucleusipsiLCpLRt1
Caudolateral part of the lateral reticular nucleusipsiLRtCL0.5
Lateral reticular nucleus parvicellular partipsiLRtPC3
Midportion of the lateral reticular nucleusipsiMpLRt0
Medullary reticular nucleus dorsal partipsiMdDd-0.5
Nucleus medullae oblongatae centralisipsiMdDc0.5
Parvicellular reticular nucleusipsiPCRt-0.5
Trapezoid bodyipsitz1.5
Facial nucleusipsi72
Facial nucleus dorsolateral subnucleusipsi7DL0
Facial nucleus lateral subnucleusipsi7L0
Facial nucleus medial partipsi7M3
Facial nucleus ventral partipsi7V0
Facial nucleus dorsal intermediate subnucleusipsi7DI0
Facial nerve or its rootipsi7n-2
Hypoglossal nucleusipsi12S1
Spinal trigeminal nucleusipsiSp5nc-0.5
Spinal trigeminal nucleus oral partipsiSp5O1
Superior central raphe nucleusipsiCS-0.5
Raphe magnus nucleusipsiRMg0
Raphe obscurus nucleusipsiROb-0.5
Raphe pallidus nucleusipsiRPa4
Lateralmost part of the caudal ventrolateral medullaipsiCVLMLmo-0.5
Cuneate nucleusipsiCu2.5
Olivary nucleusipsiON0
Inferior oliveipsiIO1
Inferior olive dorsal nucleus ventral leafipsiIODvL-0.5
Inferior olive medial nucleusipsiIOM-0.5
Inferior olive principal nucleusipsiIOPr-0.5
Inferior olive principal nucleus dorsal leafipsiIOPrdl-0.5
Lateral bend regions of the principal olivary nucleusipsiLBON-0.5
Lateral paragigantocellular nucleusipsiLPGi1.5
Subretrofacial nucleusipsiSuReFa0
Nucleus of the horizontal limb of the diagonal bandipsiHDB-2
Nucleus of the vertical limb of the diagonal bandipsiVDB-0.5
Medial preoptic nucleusipsiMPO0
Lateral hypothalamic areaipsiLH2
Posterior thalamic nuclear groupipsiPo-0.5
Zona incertaipsiZI2
Zona incerta medial partipsiZIm-0.5
Zona incerta central partipsiZIce-0.5
Dorsolateral funiculusipsidlft-2
Dorsolateral funiculus cervical partipsidlftC-2
StriatumipsiSTR1
Caudate putamenipsiCPu1
Subthalamic nucleusipsiSTh2
Cerebral cortexipsiCEC-10
Caudal forelimb motor areaipsiCFMA2
Rostral forelimb motor areaipsiRFMA2
Medial prefrontal cortexipsimPFC2
Primary somatosensory cortex barrel fieldipsiS1BF1
Primary somatosensory cortex forelimb regionipsiS1FL0
Lateral septal nucleus caudal partipsiLSc3
Spinal cordipsiMES3
Dorsal horn of spinal cordipsiDHMES3
Dorsoventral spinal cordipsiDVHMES3
Gray matter of spinal cordipsiGMES2
Pyramidal tractipsipy-0.5
Rubrospinal tractipsirs-0.5
Spinal cord lamina 7ipsiMESL73
Spinal cord lamina 8ipsiMESL81
Spinal cord lamina 9ipsiMESL91
Cervical segmentsipsiCSeg3
Cervical segment 1ipsiCS13
Intermediomedial cell column C1ipsiIMMC1-0.5
Spinal cord layers C1ipsiSCLC11
Dorsal horn C1ipsiDHC1-0.5
Spinal cord layer 5 C1ipsiSCL5C11
Spinal cord layer 6 C1ipsiSCL6C11
Spinal cord layer 7 C1ipsiSCL7C11
Cervical segment 2ipsiCS23
Spinal cord layers C2ipsiSCLC21
Dorsal horn C2ipsiDHC2-0.5
Spinal cord layer 5 C2ipsiSCL5C21
Spinal cord layer 6 C2ipsiSCL6C21
Spinal cord layer 7 C2ipsiSCL7C21
Cervical segment 3ipsiCS33
Spinal cord layers C3ipsiSCLC31
Spinal cord layer 5 C3ipsiSCL5C31
Spinal cord layer 6 C3ipsiSCL6C31
Spinal cord layer 7 C3ipsiSCL7C31
Cervical segment 4ipsiCS43
Intermediomedial cell column C4ipsiIMMC43
Spinal cord layers C4ipsiSCLC41
Spinal cord layer 5 C4ipsiSCL5C41
Spinal cord layer 6 C4ipsiSCL6C41
Spinal cord layer 7 C4ipsiSCL7C41
Cervical segment 5ipsiCS53
Spinal cord layers C5ipsiSCLC51
Area X C5ipsiSCL10C52.5
Dorsal horn C5ipsiDHC5-0.5
Spinal cord layer 5 C5ipsiSCL5C52.5
Spinal cord layer 6 C5ipsiSCL6C52.5
Spinal cord layer 3 C5ipsiSCL3C52.5
Spinal cord layer 4 C5ipsiSCL4C52.5
Spinal cord layer 1 C5ipsiSCL1C52.5
Spinal cord layer 2 C5ipsiSCL2C52.5
Ventral horn C5ipsiVHC54
Spinal cord layer 7 C5ipsiSCL7C52.5
Spinal cord layer 8 C5ipsiSCL8C52.5
Spinal cord layer 9 C5ipsiSCL9C52.5
Cervical segment 6ipsiCS63
Spinal cord layers C6ipsiSCLC61
Area X C6ipsiSCL10C62.5
Dorsal horn C6ipsiDHC6-0.5
Spinal cord layer 5 C6ipsiSCL5C62.5
Spinal cord layer 6 C6ipsiSCL6C62.5
Spinal cord layer 3 C6ipsiSCL3C62.5
Spinal cord layer 4 C6ipsiSCL4C62.5
Spinal cord layer 1 C6ipsiSCL1C62.5
Spinal cord layer 2 C6ipsiSCL2C62.5
Ventral horn C6ipsiVHC64
Spinal cord layer 7 C6ipsiSCL7C62.5
Spinal cord layer 8 C6ipsiSCL8C62.5
Spinal cord layer 9 C6ipsiSCL9C62.5
Cervical segment 7ipsiCS73
Spinal cord layers C7ipsiSCLC71
Area X C7ipsiSCL10C72.5
Dorsal horn C7ipsiDHC7-0.5
Spinal cord layer 5 C7ipsiSCL5C72.5
Spinal cord layer 6 C7ipsiSCL6C72.5
Spinal cord layer 3 C7ipsiSCL3C72.5
Spinal cord layer 4 C7ipsiSCL4C72.5
Spinal cord layer 1 C7ipsiSCL1C72.5
Spinal cord layer 2 C7ipsiSCL2C72.5
Ventral horn C7ipsiVHC74
Spinal cord layer 7 C7ipsiSCL7C72.5
Spinal cord layer 8 C7ipsiSCL8C72.5
Spinal cord layer 9 C7ipsiSCL9C72.5
Cervical segment 8ipsiCS83
Spinal cord layers C8ipsiSCLC81
Area X C8ipsiSCL10C82.5
Dorsal horn C8ipsiDHC8-0.5
Spinal cord layer 5 C8ipsiSCL5C82.5
Spinal cord layer 6 C8ipsiSCL6C82.5
Spinal cord layer 3 C8ipsiSCL3C82.5
Spinal cord layer 4 C8ipsiSCL4C82.5
Spinal cord layer 1 C8ipsiSCL1C82.5
Spinal cord layer 2 C8ipsiSCL2C82.5
Ventral horn C8ipsiVHC84
Spinal cord layer 7 C8ipsiSCL7C82.5
Spinal cord layer 8 C8ipsiSCL8C82.5
Spinal cord layer 9 C8ipsiSCL9C82.5
Cervical enlargementipsiCSegE-0.5
Thoracal segmentsipsiTSeg2
Upper thoracic spinal cordipsiTSegUp-0.5
Thoracal segment 1ipsiT11
Spinal cord layers T1ipsiSCLT11
Spinal cord layer 5 T1ipsiSCL5T11
Spinal cord layer 6 T1ipsiSCL6T11
Spinal cord layer 7 T1ipsiSCL7T11
Spinal cord layer 9 T1ipsiSCL9T1-0.5
Spinal cord layers T2ipsiSCLT2-0.5
Spinal cord layer 5 T2ipsiSCL5T21
Spinal cord layer 6 T2ipsiSCL6T21
Spinal cord layer 7 T2ipsiSCL7T21
Spinal cord layers T3ipsiSCLT3-0.5
Spinal cord layer 5 T3ipsiSCL5T31
Spinal cord layer 6 T3ipsiSCL6T31
Spinal cord layer 7 T3ipsiSCL7T31
Spinal cord layers T4ipsiSCLT4-0.5
Spinal cord layer 5 T4ipsiSCL5T41
Spinal cord layer 6 T4ipsiSCL6T41
Spinal cord layer 7 T4ipsiSCL7T41
Mid thoracal segmentsipsiTSegM-0.5
Thoracal segment 5ipsiT52
Spinal cord layers T5ipsiSCLT5-0.5
Spinal cord layer 5 T5ipsiSCL5T51
Spinal cord layer 6 T5ipsiSCL6T51
Spinal cord layer 7 T5ipsiSCL7T51
Thoracal segment 6ipsiT63
Spinal cord layers T6ipsiSCLT6-0.5
Spinal cord layer 5 T6ipsiSCL5T61
Spinal cord layer 6 T6ipsiSCL6T61
Spinal cord layer 7 T6ipsiSCL7T61
Thoracal segment 7ipsiT72
Spinal cord layers T7ipsiSCLT7-0.5
Area X T7ipsiSCL10T72
Spinal cord layer 5 T7ipsiSCL5T72
Spinal cord layer 6 T7ipsiSCL6T72
Spinal cord layer 3 T7ipsiSCL3T72
Spinal cord layer 1 T7ipsiSCL1T72
Spinal cord layer 4 T7ipsiSCL4T72
Spinal cord layer 2 T7ipsiSCL2T72
Spinal cord layer 7 T7ipsiSCL7T72
Spinal cord layer 8 T7ipsiSCL8T72
Spinal cord layer 9 T7ipsiSCL9T72
Thoracal segment 8ipsiT82
Spinal cord layers T8ipsiSCLT8-0.5
Area X T8ipsiSCL10T82
Spinal cord layer 5 T8ipsiSCL5T82
Spinal cord layer 6 T8ipsiSCL6T82
Spinal cord layer 3 T8ipsiSCL3T82
Spinal cord layer 4 T8ipsiSCL4T82
Spinal cord layer 1 T8ipsiSCL1T82
Spinal cord layer 2 T8ipsiSCL2T82
Spinal cord layer 7 T8ipsiSCL7T82
Spinal cord layer 8 T8ipsiSCL8T82
Spinal cord layer 9 T8ipsiSCL9T82
Thoracal segment 9ipsiT92
Spinal cord layers T9ipsiSCLT9-0.5
Spinal cord layer 5 T9ipsiSCL5T91
Spinal cord layer 6 T9ipsiSCL6T91
Spinal cord layer 7 T9ipsiSCL7T91
Lower thoracic spinal cordipsiTSegLo-0.5
Spinal cord layers T10ipsiSCLT10-0.5
Spinal cord layer 5 T10ipsiSCL5T101
Spinal cord layer 6 T10ipsiSCL6T101
Spinal cord layer 7 T10ipsiSCL7T101
Spinal cord layers T11ipsiSCLT11-0.5
Spinal cord layer 5 T11ipsiSCL5T111
Spinal cord layer 6 T11ipsiSCL6T111
Spinal cord layer 7 T11ipsiSCL7T111
Spinal cord layers T12ipsiSCLT12-0.5
Spinal cord layer 5 T12ipsiSCL5T121
Spinal cord layer 6 T12ipsiSCL6T121
Spinal cord layer 7 T12ipsiSCL7T121
Spinal cord layers T13ipsiSCLT13-0.5
Area X T13ipsiSCL10T132
Spinal cord layer 5 T13ipsiSCL5T132
Spinal cord layer 6 T13ipsiSCL6T132
Spinal cord layer 3 T13ipsiSCL3T132
Spinal cord layer 4 T13ipsiSCL4T132
Spinal cord layer 1 T13ipsiSCL1T132
Spinal cord layer 2 T13ipsiSCL2T132
Spinal cord layer 7 T13ipsiSCL7T132
Spinal cord layer 8 T13ipsiSCL8T132
Spinal cord layer 9 T13ipsiSCL9T132
Lumbosacral spinal cordipsiLSSC-0.5
Lumbar segmentsipsiLSeg-0.5
Lumbar enlargementipsiLSegE2
Lumbar segment 1ipsiL13
Spinal cord layers L1ipsiSCLL1-0.5
Area X L1ipsiSCL10L12
Spinal cord layer 5 L1ipsiSCL5L12
Spinal cord layer 6 L1ipsiSCL6L12
Spinal cord layer 3 L1ipsiSCL3L12
Spinal cord layer 4 L1ipsiSCL4L12
Spinal cord layer 1 L1ipsiSCL1L12
Spinal cord layer 2 L1ipsiSCL2L12
Spinal cord layer 7 L1ipsiSCL7L12
Spinal cord layer 8 L1ipsiSCL8L12
Spinal cord layer 9 L1ipsiSCL9L12
Lumbar segment 2ipsiL23
Spinal cord layers L2ipsiSCLL2-0.5
Spinal cord layer 5 L2ipsiSCL5L21
Spinal cord layer 6 L2ipsiSCL6L21
Spinal cord layer 7 L2ipsiSCL7L21
Lumbar segment 3ipsiL31.5
Spinal cord layers L3ipsiSCLL3-0.5
Dorsal horn L3ipsiDHL33
Spinal cord layer 5 L3ipsiSCL5L31
Spinal cord layer 6 L3ipsiSCL6L31
Ventral horn L3ipsiVHL33
Spinal cord layer 7 L3ipsiSCL7L31
Spinal cord border between layer 10 and layer 7 L3ipsiSCLb10L7L32
Lumbar segment 4ipsiL4-0.5
Spinal cord layers L4ipsiSCLL4-0.5
Dorsal horn L4ipsiDHL43
Spinal cord layer 5 L4ipsiSCL5L41
Spinal cord layer 6 L4ipsiSCL6L41
Ventral horn L4ipsiVHL43
Spinal cord layer 7 L4ipsiSCL7L41
Spinal cord border between layer 10 and layer 7 L4ipsiSCLb10L7L42
Lumbar segment 5ipsiL52
Spinal cord layers L5ipsiSCLL5-0.5
Dorsal horn L5ipsiDHL53
Spinal cord layer 5 L5ipsiSCL5L51
Spinal cord layer 6 L5ipsiSCL6L51
Ventral horn L5ipsiVHL53
Spinal cord layer 7 L5ipsiSCL7L51
Spinal nucleus of the bulbocavernosus lumbal segment 5ipsiBCL51
Lumbar segment 6ipsiL62
Spinal cord layers L6ipsiSCLL6-0.5
Dorsal horn L6ipsiDHL63
Spinal cord layer 5 L6ipsiSCL5L61
Spinal cord layer 6 L6ipsiSCL6L61
Ventral horn L6ipsiVHL63
Spinal cord layer 7 L6ipsiSCL7L61
Spinal nucleus of the bulbocavernosus lumbal segment 6ipsiBCL61
Sacral segment 1ipsiSa13
Spinal cord layers S1ipsiSCLS1-0.5
Dorsal horn S1ipsiDHS13
Spinal cord layer 5 S1ipsiSCL5S11
Spinal cord layer 6 S1ipsiSCL6S11
Ventral horn S1ipsiVHSa13
Spinal cord layer 7 S1ipsiSCL7S11
Sacral segment 2ipsiSa23
Spinal cord layers S2ipsiSCLS2-0.5
Dorsal horn S2ipsiDHS23
Spinal cord layer 5 S2ipsiSCL5S21
Spinal cord layer 6 S2ipsiSCL6S21
Ventral horn S2ipsiVHSa23
Spinal cord layer 7 S2ipsiSCL7S21
Sacral segment 3ipsiSa33
Spinal cord layers S3ipsiSCLS3-0.5
Spinal cord layer 5 S3ipsiSCL5S31
Spinal cord layer 6 S3ipsiSCL6S31
Spinal cord layer 7 S3ipsiSCL7S31
Sacral segment 4ipsiSa43
Spinal cord layers S4ipsiSCLS4-0.5
Spinal cord layer 5 S4ipsiSCL5S41
Spinal cord layer 6 S4ipsiSCL6S41
Spinal cord layer 7 S4ipsiSCL7S41
Coccygeal segment 1ipsiCo13
Spinal cord layers Co1ipsiSCLCo1-0.5
Coccygeal segment 2ipsiCo23
Spinal cord layers Co2ipsiSCLCo2-0.5
Spinal cord layers Co3ipsiSCLCo3-0.5
Ventral horn of spinal cordipsiVHMES-0.5
MotoneuronsipsiVMESmot-0.5
Spinal cord interneuronsipsiMESin-0.5
Hypoglossal nervecontra12P1
Hypoglossal nerveipsi12P2
Sciatic nerveipsisci1
ColonipsiOrgsColonS2
Distal colonipsiOrgsColonDi-10
Flexor digitorum musclecontraMuscFD-0.5
Tibialis anterior musclecontraMuscTA-0.5
Gastrocnemius musclecontraMuscGC4
Bulbospongiosus musclecontraMuscbsp3
Femoral bone marrowcontraOrgSkFemM1
Mammary glandcontraOrgMamG-0.5
EpididymiscontraOrgEpi-0.5
TestiscontraOrgTest-0.5
KidneycontraOrgsKid-0.5
Intercapsular brown adipose tissueipsiOrgBATi-10
Adrenal glandipsiADRE-10
Flexor digitorum muscleipsiMuscFD3
Femoral musclesipsiMuscFem-0.5
Biceps femoris muscleipsiMuscBF1
Tibialis anterior muscleipsiMuscTA2
Gastrocnemius muscleipsiMuscGC3
Soleus muscleipsiMuscSo-0.5
Lumbar epaxial musclesipsiMuscLep-10
Neck muscleipsiMuscNeck-0.5
Bulbospongiosus muscleipsiMuscbsp3
Femoral bone marrowipsiOrgSkFemM1
Mammary glandipsiOrgMamG2
Epididymis caputipsiOrgEpiCa1
Epididymis caudaipsiOrgEpiCau3
ProstateipsiOrgProst2
TestisipsiOrgTest1
Urinary bladderipsiOrgUrBLa3
Trigone of the urinary bladderipsiOrgUrBLaT-10

Input from

NameSideAbbr.WeightDetails
Central graycontraCG1
Central gray pons partcontraCGP0
Inferior colliculuscontraICOL1
Superior colliculuscontraSC2
Substantia nigra A9contraSN0
Substantia nigra compact partcontraSNC-0.5
Ventral tegmental area A10contraVTA-0.5
Ventrolateral tegmental areacontraVLTg1
CerebellumcontraCERE3
Medial cerebellar cortexcontraCERCM1
Dorsolateral humpcontraCERcndl1
Dorsomedial crestcontraCERcndm1
Interposed cerebellar nucleicontraICN3
Anterior interposed nucleuscontraAIN3
Anterior interposed nucleus lateral partcontraAINL3
Anterior interposed nucleus medial partcontraAINM3
Posterior interposed nucleuscontraCERpin3
Posterior interposed nucleus rostral partcontraCERpinR1
Central part of the interposed posterior nucleuscontraCERpinCe-0.5
Lateral cerebellar nucleuscontraCERL3
Dorsal part of lateral cerebellar nucleuscontraCERLD1
Lateral cerebellar nucleus lateral partcontraCERLL-0.5
Lateral cerebellar nucleus parvicellular partcontraLatPC1
Lateral cerebellar nucleus rostral partcontraCERLr-0.5
Rostrodorsal extent of the lateral cerebellar nucleuscontraCERLrde3
Medial cerebellar nucleuscontraMed3
Medial cerebellar nucleus centromedial partcontraCMMed1
Medial cerebellar nucleus middle subdivisioncontraMMCM1
Dorsolateral protuberancecontraDLPr1
Interstitial cell groupscontraCERIc-0.5
Superior cerebellar pedunclecontrasucep-2
A5 noradrenaline cellscontraA50.5
A7 noradrenaline cellscontraA70
Locus coeruleuscontraLC1
Pontine sublaterodorsal nucleuscontraPsLdn1
Pontine reticular nucleuscontraPRN0.5
Pontine reticular nucleus caudal partcontraPNC1
Parabrachial nucleuscontraPB-0.5
Parabrachial nucleus dorsal partcontraPBD2
Parabrachial nucleus ventral partcontraPBV2
Gigantocellular reticular nucleuscontraGi1
Medullary reticular nucleus dorsal partcontraMdDd3
Parvicellular reticular nucleuscontraPCRt2
C1 adrenaline cellscontraC10
C2 adrenaline cellscontraC20
C3 adrenaline cellscontraC30.5
Facial nucleuscontra72
Spinal trigeminal nucleus oral partcontraSp5O-0.5
Lateral vestibular nucleuscontraLVe1
Nucleus of the solitary tractcontraSol0
Dorsal raphe nucleuscontraDR2
Pontine raphe nucleuscontraPnR1
Raphe magnus nucleuscontraRMg2
Raphe obscurus nucleuscontraROb0
A1 noradrenergic cellscontraA10.5
A2 noradrenergic cellscontraA20
Lateral superior olivecontraLSO1
Paragigantocellular reticular nucleuscontraPGi0.5
Nucleus of the horizontal limb of the diagonal bandcontraHDB1
Nucleus of the vertical limb of the diagonal bandcontraVDB1
Substantia innominatacontraSI0
Lateral preoptic areacontraLPO0
Medial preoptic areacontraMPA1
Medial preoptic nucleuscontraMPO-0.5
Perifornical hypothalamic area [Preoptic anterior region]contraPFxPAR0
Anterior hypothalamic areacontraAHA0
Dorsal hypothalamic areacontraDA0
Dorsomedial hypothalamic areacontraDMHyA0
Posterior hypothalamic nucleuscontraPH2
Posterior hypothalamic nucleus caudal partcontraPHCa0
Posterior hypothalamic nucleus rostral partcontraPHRo0
Ventromedial hypothalamic nucleuscontraVMH1
Periventricular hypothalamic nucleuscontraPe0
Suprachiasmatic nucleuscontraSCh0
Parafascicular thalamic nucleuscontraPF2
Posterior groupcontraPTG1
Zona incertacontraZI1
Lateral habenular nucleuscontraLHb2
Medial habenular nucleuscontraMHb0
Basolateral amygdaloid nucleuscontraBL0
Bed nucleus of the stria terminaliscontraBST0
Central amygdaloid nucleuscontraCe0
Accumbens nucleuscontraAc-0.5
Caudate putamencontraCPu-0.5
Lateral agranular prefrontal cortexcontraAGl0.5
Forelimb motor cortexcontraFMCx1
Jaw movement motor cortexcontraJMCx1
Primary somatosensory cortexcontraS10
Lateral spinal nucleus C1contraLSpC1-0.5
Area X C1contraSCL10C1-0.5
Spinal cord layer 5 C1contraSCL5C1-0.5
Spinal cord layer 6 C1contraSCL6C1-0.5
Spinal cord layer 4 C1contraSCL4C1-0.5
Spinal cord layer 1 C1contraSCL1C1-0.5
Lateral spinal nucleus C2contraLSpC2-0.5
Area X C2contraSCL10C2-0.5
Spinal cord layer 5 C2contraSCL5C2-0.5
Spinal cord layer 6 C2contraSCL6C2-0.5
Spinal cord layer 4 C2contraSCL4C2-0.5
Spinal cord layer 1 C2contraSCL1C2-0.5
Lateral spinal nucleus C3contraLSpC3-0.5
Area X C3contraSCL10C3-0.5
Spinal cord layer 5 C3contraSCL5C3-0.5
Spinal cord layer 6 C3contraSCL6C3-0.5
Spinal cord layer 4 C3contraSCL4C3-0.5
Spinal cord layer 1 C3contraSCL1C3-0.5
Lateral spinal nucleus C4contraLSpC4-0.5
Area X C4contraSCL10C4-0.5
Spinal cord layer 5 C4contraSCL5C4-0.5
Spinal cord layer 6 C4contraSCL6C4-0.5
Spinal cord layer 4 C4contraSCL4C4-0.5
Spinal cord layer 1 C4contraSCL1C4-0.5
Lateral spinal nucleus C5contraLSpC5-0.5
Area X C5contraSCL10C5-0.5
Spinal cord layer 5 C5contraSCL5C5-0.5
Spinal cord layer 6 C5contraSCL6C5-0.5
Spinal cord layer 4 C5contraSCL4C5-0.5
Spinal cord layer 1 C5contraSCL1C5-0.5
Lateral spinal nucleus C6contraLSpC6-0.5
Area X C6contraSCL10C6-0.5
Spinal cord layer 5 C6contraSCL5C6-0.5
Spinal cord layer 6 C6contraSCL6C6-0.5
Spinal cord layer 4 C6contraSCL4C6-0.5
Spinal cord layer 1 C6contraSCL1C6-0.5
Lateral spinal nucleus C7contraLSpC7-0.5
Area X C7contraSCL10C7-0.5
Spinal cord layer 5 C7contraSCL5C7-0.5
Spinal cord layer 6 C7contraSCL6C7-0.5
Spinal cord layer 4 C7contraSCL4C7-0.5
Spinal cord layer 1 C7contraSCL1C7-0.5
Spinal cord layer 9 C7contraSCL9C7-0.5
Lateral spinal nucleus C8contraLSpC8-0.5
Area X C8contraSCL10C8-0.5
Spinal cord layer 5 C8contraSCL5C8-0.5
Spinal cord layer 6 C8contraSCL6C8-0.5
Spinal cord layer 4 C8contraSCL4C8-0.5
Spinal cord layer 1 C8contraSCL1C8-0.5
Spinal cord layer 9 C8contraSCL9C8-0.5
Lateral spinal nucleus T1contraLSpT1-0.5
Area X T1contraSCL10T1-0.5
Spinal cord layer 5 T1contraSCL5T1-0.5
Spinal cord layer 6 T1contraSCL6T1-0.5
Spinal cord layer 4 T1contraSCL4T1-0.5
Spinal cord layer 1 T1contraSCL1T1-0.5
Lateral spinal nucleus T2contraLSpT2-0.5
Area X T2contraSCL10T2-0.5
Spinal cord layer 5 T2contraSCL5T2-0.5
Spinal cord layer 6 T2contraSCL6T2-0.5
Spinal cord layer 4 T2contraSCL4T2-0.5
Spinal cord layer 1 T2contraSCL1T2-0.5
Lateral spinal nucleus T3contraLSpT3-0.5
Area X T3contraSCL10T3-0.5
Spinal cord layer 5 T3contraSCL5T3-0.5
Spinal cord layer 6 T3contraSCL6T3-0.5
Spinal cord layer 4 T3contraSCL4T3-0.5
Spinal cord layer 1 T3contraSCL1T3-0.5
Lateral spinal nucleus T4contraLSpT4-0.5
Area X T4contraSCL10T4-0.5
Spinal cord layer 5 T4contraSCL5T4-0.5
Spinal cord layer 6 T4contraSCL6T4-0.5
Spinal cord layer 4 T4contraSCL4T4-0.5
Spinal cord layer 1 T4contraSCL1T4-0.5
Lateral spinal nucleus T5contraLSpT5-0.5
Area X T5contraSCL10T5-0.5
Spinal cord layer 5 T5contraSCL5T5-0.5
Spinal cord layer 6 T5contraSCL6T5-0.5
Spinal cord layer 4 T5contraSCL4T5-0.5
Spinal cord layer 1 T5contraSCL1T5-0.5
Lateral spinal nucleus T6contraLSpT6-0.5
Area X T6contraSCL10T6-0.5
Spinal cord layer 5 T6contraSCL5T6-0.5
Spinal cord layer 6 T6contraSCL6T6-0.5
Spinal cord layer 4 T6contraSCL4T6-0.5
Spinal cord layer 1 T6contraSCL1T6-0.5
Lateral spinal nucleus T7contraLSpT7-0.5
Area X T7contraSCL10T7-0.5
Spinal cord layer 5 T7contraSCL5T7-0.5
Spinal cord layer 6 T7contraSCL6T7-0.5
Spinal cord layer 4 T7contraSCL4T7-0.5
Spinal cord layer 1 T7contraSCL1T7-0.5
Lateral spinal nucleus T8contraLSpT8-0.5
Area X T8contraSCL10T8-0.5
Spinal cord layer 5 T8contraSCL5T8-0.5
Spinal cord layer 6 T8contraSCL6T8-0.5
Spinal cord layer 4 T8contraSCL4T8-0.5
Spinal cord layer 1 T8contraSCL1T8-0.5
Lateral spinal nucleus T9contraLSpT9-0.5
Area X T9contraSCL10T9-0.5
Spinal cord layer 5 T9contraSCL5T9-0.5
Spinal cord layer 6 T9contraSCL6T9-0.5
Spinal cord layer 4 T9contraSCL4T9-0.5
Spinal cord layer 1 T9contraSCL1T9-0.5
Lateral spinal nucleus T10contraLSpT10-0.5
Area X T10contraSCL10T10-0.5
Spinal cord layer 5 T10contraSCL5T10-0.5
Spinal cord layer 6 T10contraSCL6T10-0.5
Spinal cord layer 4 T10contraSCL4T10-0.5
Spinal cord layer 1 T10contraSCL1T10-0.5
Lateral spinal nucleus T11contraLSpT11-0.5
Area X T11contraSCL10T11-0.5
Spinal cord layer 5 T11contraSCL5T11-0.5
Spinal cord layer 6 T11contraSCL6T11-0.5
Spinal cord layer 4 T11contraSCL4T11-0.5
Spinal cord layer 1 T11contraSCL1T11-0.5
Lateral spinal nucleus T12contraLSpT12-0.5
Area X T12contraSCL10T12-0.5
Spinal cord layer 5 T12contraSCL5T12-0.5
Spinal cord layer 6 T12contraSCL6T12-0.5
Spinal cord layer 4 T12contraSCL4T12-0.5
Spinal cord layer 1 T12contraSCL1T12-0.5
Lateral spinal nucleus T13contraLSpT13-0.5
Area X T13contraSCL10T13-0.5
Spinal cord layer 5 T13contraSCL5T13-0.5
Spinal cord layer 6 T13contraSCL6T13-0.5
Spinal cord layer 4 T13contraSCL4T13-0.5
Spinal cord layer 1 T13contraSCL1T13-0.5
Lateral spinal nucleus L1contraLSpL1-0.5
Area X L1contraSCL10L1-0.5
Spinal cord layer 5 L1contraSCL5L1-0.5
Spinal cord layer 6 L1contraSCL6L1-0.5
Spinal cord layer 4 L1contraSCL4L1-0.5
Spinal cord layer 1 L1contraSCL1L1-0.5
Lateral spinal nucleus L2contraLSpL2-0.5
Area X L2contraSCL10L2-0.5
Spinal cord layer 5 L2contraSCL5L2-0.5
Spinal cord layer 6 L2contraSCL6L2-0.5
Spinal cord layer 4 L2contraSCL4L2-0.5
Spinal cord layer 1 L2contraSCL1L2-0.5
Lateral spinal nucleus L3contraLSpL3-0.5
Area X L3contraSCL10L3-0.5
Spinal cord layer 5 L3contraSCL5L3-0.5
Spinal cord layer 6 L3contraSCL6L3-0.5
Spinal cord layer 4 L3contraSCL4L3-0.5
Spinal cord layer 1 L3contraSCL1L3-0.5
Lateral spinal nucleus L4contraLSpL4-0.5
Area X L4contraSCL10L4-0.5
Spinal cord layer 5 L4contraSCL5L4-0.5
Spinal cord layer 6 L4contraSCL6L4-0.5
Spinal cord layer 4 L4contraSCL4L4-0.5
Spinal cord layer 1 L4contraSCL1L4-0.5
Spinal cord layer 9 L4contraSCL9L4-0.5
Lateral spinal nucleus L5contraLSpL5-0.5
Area X L5contraSCL10L5-0.5
Spinal cord layer 5 L5contraSCL5L5-0.5
Spinal cord layer 6 L5contraSCL6L5-0.5
Spinal cord layer 4 L5contraSCL4L5-0.5
Spinal cord layer 1 L5contraSCL1L5-0.5
Spinal cord layer 9 L5contraSCL9L5-0.5
Lateral spinal nucleus L6contraLSpL6-0.5
Area X L6contraSCL10L6-0.5
Spinal cord layer 5 L6contraSCL5L6-0.5
Spinal cord layer 6 L6contraSCL6L6-0.5
Spinal cord layer 4 L6contraSCL4L6-0.5
Spinal cord layer 1 L6contraSCL1L6-0.5
Spinal cord layer 9 L6contraSCL9L6-0.5
Lateral spinal nucleus S1contraLSpS1-0.5
Area X S1contraSCL10S1-0.5
Spinal cord layer 5 S1contraSCL5S1-0.5
Spinal cord layer 6 S1contraSCL6S1-0.5
Spinal cord layer 4 S1contraSCL4S1-0.5
Spinal cord layer 1 S1contraSCL1S1-0.5
Lateral spinal nucleus S2contraLSpS2-0.5
Area X S2contraSCL10S2-0.5
Spinal cord layer 5 S2contraSCL5S2-0.5
Spinal cord layer 6 S2contraSCL6S2-0.5
Spinal cord layer 4 S2contraSCL4S2-0.5
Spinal cord layer 1 S2contraSCL1S2-0.5
Lateral spinal nucleus S3contraLSpS3-0.5
Area X S3contraSCL10S3-0.5
Spinal cord layer 5 S3contraSCL5S3-0.5
Spinal cord layer 6 S3contraSCL6S3-0.5
Spinal cord layer 4 S3contraSCL4S3-0.5
Spinal cord layer 1 S3contraSCL1S3-0.5
Lateral spinal nucleus S4contraLSpS4-0.5
Area X S4contraSCL10S4-0.5
Spinal cord layer 5 S4contraSCL5S4-0.5
Spinal cord layer 6 S4contraSCL6S4-0.5
Spinal cord layer 4 S4contraSCL4S4-0.5
Spinal cord layer 1 S4contraSCL1S4-0.5
Lateral spinal nucleus Co1contraLSpCo1-0.5
Lateral spinal nucleus Co2contraLSpCo2-0.5
Lateral spinal nucleus Co3contraLSpCo3-0.5
Central grayipsiCG3
Central gray pons partipsiCGP2
Oculomotor systemipsiOCS1
Red nucleusipsiR1
Inferior colliculusipsiICOL1
Intercollicular nucleusipsiInCo1
Superior colliculusipsiSC3
Substantia nigra A9ipsiSN1
Substantia nigra compact partipsiSNC1
Substantia nigra reticular partipsiSNR2
Ventrolateral tegmental areaipsiVLTg1
Laterodorsal tegmental nucleusipsiLDTg-0.5
Ventral tegmental nucleus central partipsiVTgC-0.5
Pedunculopontine tegmental nucleusipsiPPTg-2
Edinger Westphal nucleusipsiEW-0.5
CerebellumipsiCERE-2
Medial cerebellar cortexipsiCERCM0
Deep cerebellar nucleiipsiDNC2
Interposed cerebellar nucleiipsiICN3
Anterior interposed nucleusipsiAIN3
Anterior interposed nucleus lateral partipsiAINL3
Posterior interposed nucleusipsiCERpin3
Lateral cerebellar nucleusipsiCERL3
Medial cerebellar nucleusipsiMed1
Superior cerebellar peduncleipsisucep-2
A5 noradrenaline cellsipsiA50.5
A7 noradrenaline cellsipsiA70.5
Locus coeruleusipsiLC2
Nucleus incertus pars compactaipsiNIc0
Nucleus incertus pars dissipataipsiNId0
Pontine sublaterodorsal nucleusipsiPsLdn1
Pontomesencephalic grayipsiPoMG-2
Mesencephalic reticular formation dorsolateral partipsiDLMRF-0.5
Pontine reticular nucleusipsiPRN3
Pontine reticular nucleus caudal partipsiPNC0
Peribrachial regionipsiPBR2
Parabrachial nucleusipsiPB1
Parabrachial nucleus dorsal partipsiPBD1
Parabrachial nucleus ventral partipsiPBV1
Gigantocellular reticular nucleusipsiGi3
Medullary reticular nucleus dorsal partipsiMdDd3
Parvicellular reticular nucleusipsiPCRt0
C1 adrenaline cellsipsiC10.5
C2 adrenaline cellsipsiC20
C3 adrenaline cellsipsiC30.5
Principal sensory trigeminal nucleusipsiPr53
Vestibular nucleiipsiVnc3
Superior vestibular nucleusipsiSuVe3
Medial vestibular nucleusipsiMVe-0.5
Lateral vestibular nucleusipsiLVe3
Inferior vestibular nucleusipsiIVN-0.5
Nucleus of the solitary tractipsiSol0
Caudal raphe nucleiipsiRANc-0.5
Dorsal raphe nucleusipsiDR2
Rostral linear nucleus of the rapheipsiRLi0
Median raphe nucleusipsiMnR0
Pontine raphe nucleusipsiPnR1
Raphe magnus nucleusipsiRMg2
Raphe obscurus nucleusipsiROb1
A1 noradrenergic cellsipsiA11
A2 noradrenergic cellsipsiA20.5
Cuneate nucleusipsiCu1
Lateral superior oliveipsiLSO0
Paragigantocellular reticular nucleusipsiPGi0.5
Dorsal paragigantocellular nucleusipsiDPGi3
Diagonal band of BrocaipsiDBB0
Nucleus of the horizontal limb of the diagonal bandipsiHDB1
Nucleus of the vertical limb of the diagonal bandipsiVDB1
Substantia innominataipsiSI1
Lateral preoptic areaipsiLPO2
Medial preoptic areaipsiMPA3
Magnocellular preoptic nucleusipsiMCPO0
Medial preoptic nucleusipsiMPO2
Dorsal regionipsiDHR0
Perifornical hypothalamic area [Preoptic anterior region]ipsiPFxPAR2
Lateral hypothalamic areaipsiLH3
Lateral hypothalamic area perifornical partipsiPFx1
Lateral hypothalamic area posterolateral partipsiLHPL-0.5
Reticular lateral areaipsiRLA0
Anterior hypothalamic areaipsiAHA1
Dorsal hypothalamic areaipsiDA2
Dorsomedial hypothalamic areaipsiDMHyA2
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM1
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM1
Posterior hypothalamic areaipsiPHA1
Posterior hypothalamic nucleusipsiPH2
Posterior hypothalamic nucleus caudal partipsiPHCa0
Posterior hypothalamic nucleus rostral partipsiPHRo0
Ventromedial hypothalamic nucleusipsiVMH1
Arcuate nucleusipsiArc0
Paraventricular hypothalamic nucleusipsiPa3
Periventricular hypothalamic nucleusipsiPe1
Suprachiasmatic nucleusipsiSCh1
Parafascicular thalamic nucleusipsiPF2
Parafascicular thalamic nucleus lateral partipsiPFL1
Posterior thalamic nuclear groupipsiPo-0.5
Posterior groupipsiPTG3
Zona incertaipsiZI3
Forel field H1ipsiFFH10
Forel field H2ipsiFFH20
HabenulaipsiHAB0.5
Lateral habenular nucleusipsiLHb3
Medial habenular nucleusipsiMHb3
Subpretectal regionipsiSPRT2
Amygdaloid complexipsiAC0
Basolateral amygdaloid nucleusipsiBL1
Bed nucleus of the stria terminalisipsiBST1
Bed nucleus of the stria terminalis oval nucleusipsiBSTo-10
Bed nucleus of the stria terminalis principal nucleusipsiBSTpr1
Bed nucleus of the stria terminalis ventral partipsiBNSTv-2
Central amygdaloid nucleusipsiCe1
Medial globus pallidusipsiMGP-0.5
Accumbens nucleusipsiAc0
Caudate putamenipsiCPu2
Subthalamic nucleusipsiSTh1
Cerebral cortexipsiCEC1
Cingulate cortexipsiCg0
Frontal cortex area 2ipsiFr21
Parietal association cortexipsiPtA3
Parietal cortex area 1ipsiPar1-0.5
Suprarhinal regionipsiSRR0
Prefrontal cortexipsiPFC0
Somatomotoric regionsipsiSMR-0.5
Motoric regionsipsiM3
Lateral agranular prefrontal cortexipsiAGl3
Forelimb motor cortexipsiFMCx3
Caudal forelimb motor areaipsiCFMA2
Rostral forelimb motor areaipsiRFMA2
Jaw movement motor cortexipsiJMCx2.5
Medial agranular prefrontal cortexipsiAGm2
Primary somatosensory cortexipsiS12
Primary somatosensory cortex forelimb regionipsiS1FL-0.5
Primary somatosensory cortex forelimb region layer 5ipsiS1FL50
Primary somatosensory cortex forelimb region layer 6ipsiS1FL60
Primary somatosensory cortex hindlimb regionipsiS1HL-0.5
Olfactory tubercleipsiTuO0
Ventrally lateral septal nucleus rostral part medial zoneipsiLSrmV-0.5
Spinal cordipsiMES-0.5
Spinal cord layer 1 C1ipsiSCL1C1-0.5
Spinal cord layer 1 C2ipsiSCL1C2-0.5
Spinal cord layer 1 C3ipsiSCL1C3-0.5
Spinal cord layer 1 C4ipsiSCL1C4-0.5
Spinal cord layer 1 C5ipsiSCL1C5-0.5
Spinal cord layer 1 C6ipsiSCL1C6-0.5
Spinal cord layer 1 C7ipsiSCL1C7-0.5
Spinal cord layer 1 C8ipsiSCL1C8-0.5
Spinal cord layer 1 T1ipsiSCL1T1-0.5
Spinal cord layer 1 T2ipsiSCL1T2-0.5
Spinal cord layer 1 T3ipsiSCL1T3-0.5
Spinal cord layer 1 T4ipsiSCL1T4-0.5
Spinal cord layer 1 T5ipsiSCL1T5-0.5
Thoracal segment 6ipsiT61
Spinal cord layer 1 T6ipsiSCL1T6-0.5
Thoracal segment 7ipsiT71
Spinal cord layer 1 T7ipsiSCL1T7-0.5
Thoracal segment 8ipsiT81
Spinal cord layer 1 T8ipsiSCL1T8-0.5
Thoracal segment 9ipsiT91
Spinal cord layer 1 T9ipsiSCL1T9-0.5
Spinal cord layer 1 T10ipsiSCL1T10-0.5
Spinal cord layer 1 T11ipsiSCL1T11-0.5
Spinal cord layer 1 T12ipsiSCL1T12-0.5
Spinal cord layer 1 T13ipsiSCL1T13-0.5
Lumbar segmentsipsiLSeg-0.5
Spinal cord layer 1 L1ipsiSCL1L1-0.5
Spinal cord layer 1 L2ipsiSCL1L2-0.5
Dorsal horn L3ipsiDHL3-1
Spinal cord layer 1 L3ipsiSCL1L3-0.5
Ventral horn L3ipsiVHL3-1
Dorsal horn L4ipsiDHL4-1
Spinal cord layer 1 L4ipsiSCL1L4-0.5
Ventral horn L4ipsiVHL4-1
Dorsal horn L5ipsiDHL5-1
Spinal cord layer 1 L5ipsiSCL1L5-0.5
Ventral horn L5ipsiVHL5-1
Lumbar segment 6ipsiL60.5
Dorsal horn L6ipsiDHL6-1
Spinal cord layer 1 L6ipsiSCL1L6-0.5
Ventral horn L6ipsiVHL6-1
Dorsal horn S1ipsiDHS1-1
Spinal cord layer 1 S1ipsiSCL1S1-0.5
Ventral horn S1ipsiVHSa1-1
Dorsal horn S2ipsiDHS2-1
Spinal cord layer 1 S2ipsiSCL1S2-0.5
Ventral horn S2ipsiVHSa2-1
Spinal cord layer 1 S3ipsiSCL1S3-0.5
Spinal cord layer 1 S4ipsiSCL1S4-0.5
TongueipsiOrgOCT-10
Anterior digastricus muscleipsiMuscADig-10
Posterior digastricus muscleipsiMuscPDig-10
Genioglossus muscleipsiMuscGenioG-10
Geniohyoid muscleipsiMuscGenio-10
Musculus masseteripsiMuscMass-10
Temporal muscleipsiMuscT-10
Pterygoid muscleipsiMuscPterygo-10
Mylohyoid muscleipsiMuscMyhy-10
Styloglossus muscle systemipsiMuscStyG-10
Buccinator muscleipsiMuscBucc-10
PlatysmaipsiMuscPla-10
Zygomatic muscleipsiMuscZygo-10
Hyoglossus muscleipsiMuscHyo-10
ClitorisipsiOrgCLi1
VaginaipsiOrgVag1

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





Homepage | Staff | neuroVIISAS | Rat connectome | Other connectomes | Neuroimaging | Neurodegeneration | Students | Links | Publications