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Rat connectome



Dorsal part of spinal trigeminal nucleus oral part left


Abbreviation
Sp5OD
Color       
Superior regionsSpinal trigeminal nucleus oral part

SynonymsAbbr.Language
Dorsal part of spinal trigeminal nucleus oral partSp5ODEng
Dorsal part of the oral spinal trigeminal nucleus Eng

SubregionsSide
Dorsal one half of the borderzone of the rat trigeminal nucleus oralisleft
Dorsal margin of the spinal trigeminal nucleus oral partleft
Jaw-closing premotoneuronsleft

Output to

NameSideAbbr.WeightDetails
Cerebellar lobule 2a zone AipsiCERL2aA0
Cerebellar lobule 2b zone AipsiCERL2bA0
Cerebellar lobule 3a zone AipsiCERL3aA0
Cerebellar lobule 3b zone AipsiCERL3bA0
Cerebellar lobule 1 zone AipsiCERL1A0
Cerebellar lobule 4ipsiCERL4-0.5
Cerebellar lobule 5 zone AipsiCERL5A0
Cerebellar lobule 7ipsiCERL7-0.5
Cerebellar lobule 7aipsiCERL7a-0.5
Cerebellar lobule 7bipsiCERL7b-0.5
Cerebellar lobule 8 zone AipsiCERL8A0
Cerebellar lobule 9a zone AipsiCERL9aA0
Cerebellar lobule 9b zone AipsiCERL9bA0
Cerebellar lobule 9c zone AipsiCERL9cA0
Cerebellar lobule 10b zone AipsiCERL10bA0
Cerebellar lobule 10a zone AipsiCERL10aA0
Cerebellar lobule 6ipsiCERL6-0.5
Cerebellar lobule 6aipsiCERL6a-0.5
Cerebellar lobule 6bipsiCERL6b-0.5
Cerebellar lobule 6cipsiCERL6c-0.5
Cerebellar lobule 6dipsiCERL6d-0.5
Prepositus nucleusipsiPr-0.5
Intermediate reticular nucleusipsiIRt0
Pontine reticular nucleus oral partipsiPnO0.5
Pontine reticular nucleus caudal partipsiPNC0.5
Parabrachial nucleusipsiPB3
Parabrachial nucleus external divisonipsiPBeD3
Parabrachial nucleus medialipsiPBnMe3
Parabrachial nucleus ventral part lateral portionipsiPBVL2
Gigantocellular reticular nucleusipsiGi2
Medullary reticular nucleus dorsal partipsiMdDd2
Ventral medullary reticular formationipsiVMurF1
Parvicellular reticular nucleusipsiPCRt2
Subcoeruleus nucleusipsiSubC2
Hypoglossal nucleusipsi12S3
Supratrigeminal nucleusipsiSu53
Lateral part of the motor trigeminal nucleusipsiLMo52
Motor trigeminal nucleus dorsolateral partipsiMo5DL3
Motor trigeminal nucleus group kipsiMo5gK1
Motor trigeminal nucleus ventromedial partipsiMo5VM3
Spinal trigeminal nucleusipsiSp5nc-0.5
Superior vestibular nucleus ventral partipsiSuVeV4
Medial vestibular nucleusipsiMVe3
Inferior vestibular nucleusipsiIVN1
Nucleus of the solitary tractipsiSol3
Nucleus of the solitary tract caudal partipsiSolca3
Nucleus of the solitary tract medial partipsiSolM3
Nucleus of the solitary tract medial part lateral zoneipsiSolML1
Nucleus of the solitary tract rostral partipsiSolro3
Nucleus of the solitary tract rostrolateral partipsiSolRL3
Cuneate nucleusipsiCu-0.5
Posterior thalamic nuclear group medial partipsiPoMe2
Ventral posterior thalamic nucleus parvicellular partipsiVPPC2
Medial part of ventral posteromedial thalamic nucleusipsiVPMm2
Zona incerta ventral part caudal partipsiZIVc2
Spinal cord layer 5 C1ipsiSCL5C1-0.5
Spinal cord layer 3 C1ipsiSCL3C1-0.5
Dorsolateral motor nuclei of the ventral horn C1ipsiDLMVHC1-0.5
Ventromedial motor nuclei of the ventral horn C1ipsiVMMVHC1-0.5
Dorsolateral motor nuclei of the ventral horn C2ipsiDLMVHC2-0.5
Spinal cord layer 7 C2ipsiSCL7C2-0.5
Spinal cord layer 8 C2ipsiSCL8C2-0.5
Spinal cord layer 9 C2ipsiSCL9C2-0.5
Ventromedial motor nuclei of the ventral horn C2ipsiVMMVHC2-0.5
Spinal cord layer 7 C3ipsiSCL7C3-0.5
Spinal cord layer 8 C3ipsiSCL8C3-0.5
Spinal cord layer 9 C3ipsiSCL9C3-0.5
Ventromedial motor nuclei of the ventral horn C3ipsiVMMVHC3-0.5
Spinal cord layer 7 C4ipsiSCL7C4-0.5
Spinal cord layer 8 C4ipsiSCL8C4-0.5
Spinal cord layer 9 C4ipsiSCL9C4-0.5
Ventromedial motor nuclei of the ventral horn C4ipsiVMMVHC4-0.5
Spinal cord layer 7 C5ipsiSCL7C5-0.5
Spinal cord layer 8 C5ipsiSCL8C5-0.5
Spinal cord layer 9 C5ipsiSCL9C5-0.5
Spinal cord layer 7 C6ipsiSCL7C6-0.5
Spinal cord layer 8 C6ipsiSCL8C6-0.5
Spinal cord layer 9 C6ipsiSCL9C6-0.5
Spinal cord layer 7 C7ipsiSCL7C7-0.5
Spinal cord layer 8 C7ipsiSCL8C7-0.5
Spinal cord layer 9 C7ipsiSCL9C7-0.5
Spinal cord layer 7 C8ipsiSCL7C8-0.5
Spinal cord layer 8 C8ipsiSCL8C8-0.5
Spinal cord layer 9 C8ipsiSCL9C8-0.5
Intermediate reticular nucleuscontraIRt0
Pontine reticular nucleus oral partcontraPnO0.5
Pontine reticular nucleus caudal partcontraPNC0.5
Gigantocellular reticular nucleuscontraGi1
Medullary reticular nucleus dorsal partcontraMdDd1
Ventral medullary reticular formationcontraVMurF0.5
Parvicellular reticular nucleuscontraPCRt1
Subcoeruleus nucleuscontraSubC1
Motor trigeminal nucleuscontraMo51
Superior vestibular nucleus ventral partcontraSuVeV2
Medial vestibular nucleuscontraMVe2
Inferior vestibular nucleuscontraIVN2
Posterior thalamic nuclear group medial partcontraPoMe2.5
Ventral posterior thalamic nucleus parvicellular partcontraVPPC2.5
Medial part of ventral posteromedial thalamic nucleuscontraVPMm2.5
Zona incerta ventral part caudal partcontraZIVc2.5
Dorsolateral motor nuclei of the ventral horn C1contraDLMVHC1-0.5
Ventromedial motor nuclei of the ventral horn C1contraVMMVHC1-0.5
Dorsolateral motor nuclei of the ventral horn C2contraDLMVHC2-0.5
Spinal cord layer 7 C2contraSCL7C2-0.5
Spinal cord layer 8 C2contraSCL8C2-0.5
Spinal cord layer 9 C2contraSCL9C2-0.5
Ventromedial motor nuclei of the ventral horn C2contraVMMVHC2-0.5
Spinal cord layer 7 C3contraSCL7C3-0.5
Spinal cord layer 8 C3contraSCL8C3-0.5
Spinal cord layer 9 C3contraSCL9C3-0.5
Ventromedial motor nuclei of the ventral horn C3contraVMMVHC3-0.5
Spinal cord layer 7 C4contraSCL7C4-0.5
Spinal cord layer 8 C4contraSCL8C4-0.5
Spinal cord layer 9 C4contraSCL9C4-0.5
Ventromedial motor nuclei of the ventral horn C4contraVMMVHC4-0.5
Spinal cord layer 7 C5contraSCL7C5-0.5
Spinal cord layer 8 C5contraSCL8C5-0.5
Spinal cord layer 9 C5contraSCL9C5-0.5
Spinal cord layer 7 C6contraSCL7C6-0.5
Spinal cord layer 8 C6contraSCL8C6-0.5
Spinal cord layer 9 C6contraSCL9C6-0.5
Spinal cord layer 7 C7contraSCL7C7-0.5
Spinal cord layer 8 C7contraSCL8C7-0.5
Spinal cord layer 9 C7contraSCL9C7-0.5
Spinal cord layer 7 C8contraSCL7C8-0.5
Spinal cord layer 8 C8contraSCL8C8-0.5
Spinal cord layer 9 C8contraSCL9C8-0.5

Input from

NameSideAbbr.WeightDetails
Superior colliculusipsiSC-0.5
Superior colliculus lateral partipsiSCL-0.5
Rostrocaudal extent of the superior colliculus lateral partipsiSCLrce-0.5
Superior colliculus medial partipsimSC-0.5
Superior colliculus rostral medial partipsiSCRM-0.5
Superior colliculus rostral medial part layer 1ipsiSCRML1-0.5
Superior colliculus rostral medial part layer 2ipsiSCRML2-0.5
Superior colliculus rostral medial part layer 3ipsiSCRML3-0.5
Superior colliculus rostral medial part layer 4ipsiSCRML4-0.5
Superior colliculus rostral medial part layer 5ipsiSCRML5-0.5
Superior colliculus centeripsiSCC-0.5
Superior colliculus center rostrocaudal extentipsiSCCrce-0.5
Edinger Westphal nucleusipsiEW-0.5
Parvicellular reticular nucleus rostral portionipsipRNr2
Spinal trigeminal nucleus caudal part dorsomedial partipsiSp5CDM-0.5
Trigeminal ganglionipsi5Gn3
Nucleus of the solitary tractipsiSol-0.5
Primary somatosensory cortex rostral partipsiS1r-0.5
Primary somatosensory cortex rostral most partipsiS1rm-0.5
Edinger Westphal nucleuscontraEW-0.5
Primary somatosensory cortex rostral most partcontraS1rm-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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