University of Rostock

Department of Anatomy

Neuroscience Group

 Homepage

 Staff

 neuroVIISAS

 Rat connectome

 Other connectomes

 Neuroimaging

 Neurodegeneration

 Neuroproteomics

 Students

 Links

 Publications

Rat connectome



Posterior thalamic nuclear group medial part right


Abbreviation
PoMe
Color       
Superior regionsPosterior thalamic nuclear group

SynonymsAbbr.Language
Posterior thalamic nuclear group medial partPoMe 
Medial posterior part of the thalamusPOmEng
Medial posterior nucleiof the thalamusPOmEng
Posterior complex of the thalamus medial partPOmEng
Medial part of posterior thalamic nuclear group Eng
Medial part of the posterior thalamic nucleus Eng
Posteromedial nucleiPOmEng
Posteromedial thalamic nucleiPOmEng
Medial division of the posterior complex of the thalamus Eng

SubregionsSide
Medial border of the posterior thalamic complexright
Posteromedial thalamic nuclei caudal partright
Posteromedial thalamic nuclei whisker sensitive arearight
Posteriomedial thalamic nuclei lateral partright
Posterior thalamic nuclear group medial part rostral portionright
Ventral part of the posteromedial thalamic nucleusright

Output to

NameSideAbbr.WeightDetails
Rostral ventral respiratory groupcontraRVRG0.5
Lateral agranular prefrontal cortexcontraAGl1
Central tegmental field lateral partipsiTGACL0.5
Rostral ventral respiratory groupipsiRVRG0.5
Reticular thalamic nucleusipsiRt-0.5
Amygdalostriatal transition areaipsiAStr-0.5
Amygdalostriatal transition area rostrocaudal partipsiAStrrc-0.5
Dorsolateral striatumipsiCPudl-0.5
Primary auditory cortexipsiAu12
Lateral agranular prefrontal cortexipsiAGl2
Whiskers motor cortexipsiWMCx-0.5
Primary somatosensory cortex barrel fieldipsiS1BF1
Posteromedial barrel septum column A1 layer 1ipsiPMBSCA1L1-0.5
Posteromedial barrel septum column A1 layer 2ipsiPMBSCA1L2-0.5
Posteromedial barrel septum column A1 layer 3ipsiPMBSCA1L3-0.5
Posteromedial barrel septum column A1 layer 4ipsiPMBSCA1L4-0.5
Posteromedial barrel septum column A1 layer 5ipsiPMBSCA1L5-0.5
Posteromedial barrel septum column A2 layer 1ipsiPMBSCA2L1-0.5
Posteromedial barrel septum column A2 layer 2ipsiPMBSCA2L2-0.5
Posteromedial barrel septum column A2 layer 3ipsiPMBSCA2L3-0.5
Posteromedial barrel septum column A2 layer 4ipsiPMBSCA2L4-0.5
Posteromedial barrel septum column A2 layer 5ipsiPMBSCA2L5-0.5
Posteromedial barrel septum column A3 layer 1ipsiPMBSCA3L1-0.5
Posteromedial barrel septum column A3 layer 2ipsiPMBSCA3L2-0.5
Posteromedial barrel septum column A3 layer 3ipsiPMBSCA3L3-0.5
Posteromedial barrel septum column A3 layer 4ipsiPMBSCA3L4-0.5
Posteromedial barrel septum column A3 layer 5ipsiPMBSCA3L5-0.5
Posteromedial barrel septum column A4 layer 1ipsiPMBSCA4L1-0.5
Posteromedial barrel septum column A4 layer 2ipsiPMBSCA4L2-0.5
Posteromedial barrel septum column A4 layer 3ipsiPMBSCA4L3-0.5
Posteromedial barrel septum column A4 layer 4ipsiPMBSCA4L4-0.5
Posteromedial barrel septum column A4 layer 5ipsiPMBSCA4L5-0.5
Posteromedial barrel septum column B1 layer 1ipsiPMBSCB1L1-0.5
Posteromedial barrel septum column B1 layer 2ipsiPMBSCB1L2-0.5
Posteromedial barrel septum column B1 layer 3ipsiPMBSCB1L3-0.5
Posteromedial barrel septum column B1 layer 4ipsiPMBSCB1L4-0.5
Posteromedial barrel septum column B1 layer 5ipsiPMBSCB1L5-0.5
Posteromedial barrel septum column B2 layer 1ipsiPMBSCB2L1-0.5
Posteromedial barrel septum column B2 layer 2ipsiPMBSCB2L2-0.5
Posteromedial barrel septum column B2 layer 3ipsiPMBSCB2L3-0.5
Posteromedial barrel septum column B2 layer 4ipsiPMBSCB2L4-0.5
Posteromedial barrel septum column B2 layer 5ipsiPMBSCB2L5-0.5
Posteromedial barrel septum column B3 layer 1ipsiPMBSCB3L1-0.5
Posteromedial barrel septum column B3 layer 2ipsiPMBSCB3L2-0.5
Posteromedial barrel septum column B3 layer 3ipsiPMBSCB3L3-0.5
Posteromedial barrel septum column B3 layer 4ipsiPMBSCB3L4-0.5
Posteromedial barrel septum column B3 layer 5ipsiPMBSCB3L5-0.5
Posteromedial barrel septum column B4 layer 1ipsiPMBSCB4L1-0.5
Posteromedial barrel septum column B4 layer 2ipsiPMBSCB4L2-0.5
Posteromedial barrel septum column B4 layer 3ipsiPMBSCB4L3-0.5
Posteromedial barrel septum column B4 layer 4ipsiPMBSCB4L4-0.5
Posteromedial barrel septum column B4 layer 5ipsiPMBSCB4L5-0.5
Posteromedial barrel septum column C1 layer 1ipsiPMBSCC1L1-0.5
Posteromedial barrel septum column C1 layer 2ipsiPMBSCC1L2-0.5
Posteromedial barrel septum column C1 layer 3ipsiPMBSCC1L3-0.5
Posteromedial barrel septum column C1 layer 4ipsiPMBSCC1L4-0.5
Posteromedial barrel septum column C1 layer 5ipsiPMBSCC1L5-0.5
Posteromedial barrel septum column C2 layer 1ipsiPMBSCC2L1-0.5
Posteromedial barrel septum column C2 layer 2ipsiPMBSCC2L2-0.5
Posteromedial barrel septum column C2 layer 3ipsiPMBSCC2L3-0.5
Posteromedial barrel septum column C2 layer 4ipsiPMBSCC2L4-0.5
Posteromedial barrel septum column C2 layer 5ipsiPMBSCC2L5-0.5
Posteromedial barrel septum column C3 layer 1ipsiPMBSCC3L1-0.5
Posteromedial barrel septum column C3 layer 2ipsiPMBSCC3L2-0.5
Posteromedial barrel septum column C3 layer 3ipsiPMBSCC3L3-0.5
Posteromedial barrel septum column C3 layer 4ipsiPMBSCC3L4-0.5
Posteromedial barrel septum column C3 layer 5ipsiPMBSCC3L5-0.5
Posteromedial barrel septum column C4 layer 1ipsiPMBSCC4L1-0.5
Posteromedial barrel septum column C4 layer 2ipsiPMBSCC4L2-0.5
Posteromedial barrel septum column C4 layer 3ipsiPMBSCC4L3-0.5
Posteromedial barrel septum column C4 layer 4ipsiPMBSCC4L4-0.5
Posteromedial barrel septum column C4 layer 5ipsiPMBSCC4L5-0.5
Posteromedial barrel septum column C5 layer 1ipsiPMBSCC5L1-0.5
Posteromedial barrel septum column C5 layer 2ipsiPMBSCC5L2-0.5
Posteromedial barrel septum column C5 layer 3ipsiPMBSCC5L3-0.5
Posteromedial barrel septum column C5 layer 4ipsiPMBSCC5L4-0.5
Posteromedial barrel septum column C5 layer 5ipsiPMBSCC5L5-0.5
Posteromedial barrel septum column D1 layer 1ipsiPMBSCD1L1-0.5
Posteromedial barrel septum column D1 layer 2ipsiPMBSCD1L2-0.5
Posteromedial barrel septum column D1 layer 3ipsiPMBSCD1L3-0.5
Posteromedial barrel septum column D1 layer 4ipsiPMBSCD1L4-0.5
Posteromedial barrel septum column D1 layer 5ipsiPMBSCD1L5-0.5
Posteromedial barrel septum column D2 layer 1ipsiPMBSCD2L1-0.5
Posteromedial barrel septum column D2 layer 2ipsiPMBSCD2L2-0.5
Posteromedial barrel septum column D2 layer 3ipsiPMBSCD2L3-0.5
Posteromedial barrel septum column D2 layer 4ipsiPMBSCD2L4-0.5
Posteromedial barrel septum column D2 layer 5ipsiPMBSCD2L5-0.5
Posteromedial barrel septum column D3 layer 1ipsiPMBSCD3L1-0.5
Posteromedial barrel septum column D3 layer 2ipsiPMBSCD3L2-0.5
Posteromedial barrel septum column D3 layer 3ipsiPMBSCD3L3-0.5
Posteromedial barrel septum column D3 layer 4ipsiPMBSCD3L4-0.5
Posteromedial barrel septum column D3 layer 5ipsiPMBSCD3L5-0.5
Posteromedial barrel septum column D4 layer 1ipsiPMBSCD4L1-0.5
Posteromedial barrel septum column D4 layer 2ipsiPMBSCD4L2-0.5
Posteromedial barrel septum column D4 layer 3ipsiPMBSCD4L3-0.5
Posteromedial barrel septum column D4 layer 4ipsiPMBSCD4L4-0.5
Posteromedial barrel septum column D4 layer 5ipsiPMBSCD4L5-0.5
Posteromedial barrel septum column D5 layer 1ipsiPMBSCD5L1-0.5
Posteromedial barrel septum column D5 layer 2ipsiPMBSCD5L2-0.5
Posteromedial barrel septum column D5 layer 3ipsiPMBSCD5L3-0.5
Posteromedial barrel septum column D5 layer 4ipsiPMBSCD5L4-0.5
Posteromedial barrel septum column D5 layer 5ipsiPMBSCD5L5-0.5
Posteromedial barrel septum column D6 layer 1ipsiPMBSCD6L1-0.5
Posteromedial barrel septum column D6 layer 2ipsiPMBSCD6L2-0.5
Posteromedial barrel septum column D6 layer 3ipsiPMBSCD6L3-0.5
Posteromedial barrel septum column D6 layer 4ipsiPMBSCD6L4-0.5
Posteromedial barrel septum column D6 layer 5ipsiPMBSCD6L5-0.5
Posteromedial barrel septum column E1 layer 1ipsiPMBSCE1L1-0.5
Posteromedial barrel septum column E1 layer 2ipsiPMBSCE1L2-0.5
Posteromedial barrel septum column E1 layer 3ipsiPMBSCE1L3-0.5
Posteromedial barrel septum column E1 layer 4ipsiPMBSCE1L4-0.5
Posteromedial barrel septum column E1 layer 5ipsiPMBSCE1L5-0.5
Posteromedial barrel septum column E2 layer 1ipsiPMBSCE2L1-0.5
Posteromedial barrel septum column E2 layer 2ipsiPMBSCE2L2-0.5
Posteromedial barrel septum column E2 layer 3ipsiPMBSCE2L3-0.5
Posteromedial barrel septum column E2 layer 4ipsiPMBSCE2L4-0.5
Posteromedial barrel septum column E2 layer 5ipsiPMBSCE2L5-0.5
Posteromedial barrel septum column E3 layer 1ipsiPMBSCE3L1-0.5
Posteromedial barrel septum column E3 layer 2ipsiPMBSCE3L2-0.5
Posteromedial barrel septum column E3 layer 3ipsiPMBSCE3L3-0.5
Posteromedial barrel septum column E3 layer 4ipsiPMBSCE3L4-0.5
Posteromedial barrel septum column E3 layer 5ipsiPMBSCE3L5-0.5
Posteromedial barrel septum column E4 layer 1ipsiPMBSCE4L1-0.5
Posteromedial barrel septum column E4 layer 2ipsiPMBSCE4L2-0.5
Posteromedial barrel septum column E4 layer 3ipsiPMBSCE4L3-0.5
Posteromedial barrel septum column E4 layer 4ipsiPMBSCE4L4-0.5
Posteromedial barrel septum column E4 layer 5ipsiPMBSCE4L5-0.5
Posteromedial barrel septum column E5 layer 1ipsiPMBSCE5L1-0.5
Posteromedial barrel septum column E5 layer 2ipsiPMBSCE5L2-0.5
Posteromedial barrel septum column E5 layer 3ipsiPMBSCE5L3-0.5
Posteromedial barrel septum column E5 layer 4ipsiPMBSCE5L4-0.5
Posteromedial barrel septum column E5 layer 5ipsiPMBSCE5L5-0.5
Posteromedial barrel septum column E6 layer 1ipsiPMBSCE6L1-0.5
Posteromedial barrel septum column E6 layer 2ipsiPMBSCE6L2-0.5
Posteromedial barrel septum column E6 layer 3ipsiPMBSCE6L3-0.5
Posteromedial barrel septum column E6 layer 4ipsiPMBSCE6L4-0.5
Posteromedial barrel septum column E6 layer 5ipsiPMBSCE6L5-0.5
Posteromedial barrel septum column E7 layer 1ipsiPMBSCE7L1-0.5
Posteromedial barrel septum column E7 layer 2ipsiPMBSCE7L2-0.5
Posteromedial barrel septum column E7 layer 3ipsiPMBSCE7L3-0.5
Posteromedial barrel septum column E7 layer 4ipsiPMBSCE7L4-0.5
Posteromedial barrel septum column E7 layer 5ipsiPMBSCE7L5-0.5
Posteromedial barrel septum row A2 layer 1ipsiPMBSRA2L1-0.5
Posteromedial barrel septum row A2 layer 2ipsiPMBSRA2L2-0.5
Posteromedial barrel septum row A2 layer 3ipsiPMBSRA2L3-0.5
Posteromedial barrel septum row A2 layer 4ipsiPMBSRA2L4-0.5
Posteromedial barrel septum row A2 layer 5ipsiPMBSRA2L5-0.5
Posteromedial barrel septum row A3 layer 1ipsiPMBSRA3L1-0.5
Posteromedial barrel septum row A3 layer 2ipsiPMBSRA3L2-0.5
Posteromedial barrel septum row A3 layer 3ipsiPMBSRA3L3-0.5
Posteromedial barrel septum row A3 layer 4ipsiPMBSRA3L4-0.5
Posteromedial barrel septum row A3 layer 5ipsiPMBSRA3L5-0.5
Posteromedial barrel septum row A4 layer 1ipsiPMBSRA4L1-0.5
Posteromedial barrel septum row A4 layer 2ipsiPMBSRA4L2-0.5
Posteromedial barrel septum row A4 layer 3ipsiPMBSRA4L3-0.5
Posteromedial barrel septum row A4 layer 4ipsiPMBSRA4L4-0.5
Posteromedial barrel septum row A4 layer 5ipsiPMBSRA4L5-0.5
Posteromedial barrel septum row A1 layer 1ipsiPMBSRA1L1-0.5
Posteromedial barrel septum row A1 layer 2ipsiPMBSRA1L2-0.5
Posteromedial barrel septum row A1 layer 3ipsiPMBSRA1L3-0.5
Posteromedial barrel septum row A1 layer 4ipsiPMBSRA1L4-0.5
Posteromedial barrel septum row A1 layer 5ipsiPMBSRA1L5-0.5
Posteromedial barrel septum row B1 layer 1ipsiPMBSRB1L1-0.5
Posteromedial barrel septum row B1 layer 2ipsiPMBSRB1L2-0.5
Posteromedial barrel septum row B1 layer 3ipsiPMBSRB1L3-0.5
Posteromedial barrel septum row B1 layer 4ipsiPMBSRB1L4-0.5
Posteromedial barrel septum row B1 layer 5ipsiPMBSRB1L5-0.5
Posteromedial barrel septum row B2 layer 1ipsiPMBSRB2L1-0.5
Posteromedial barrel septum row B2 layer 2ipsiPMBSRB2L2-0.5
Posteromedial barrel septum row B2 layer 3ipsiPMBSRB2L3-0.5
Posteromedial barrel septum row B2 layer 4ipsiPMBSRB2L4-0.5
Posteromedial barrel septum row B2 layer 5ipsiPMBSRB2L5-0.5
Posteromedial barrel septum row B3 layer 1ipsiPMBSRB3L1-0.5
Posteromedial barrel septum row B3 layer 2ipsiPMBSRB3L2-0.5
Posteromedial barrel septum row B3 layer 3ipsiPMBSRB3L3-0.5
Posteromedial barrel septum row B3 layer 4ipsiPMBSRB3L4-0.5
Posteromedial barrel septum row B3 layer 5ipsiPMBSRB3L5-0.5
Posteromedial barrel septum row B4 layer 1ipsiPMBSRB4L1-0.5
Posteromedial barrel septum row B4 layer 2ipsiPMBSRB4L2-0.5
Posteromedial barrel septum row B4 layer 3ipsiPMBSRB4L3-0.5
Posteromedial barrel septum row B4 layer 4ipsiPMBSRB4L4-0.5
Posteromedial barrel septum row B4 layer 5ipsiPMBSRB4L5-0.5
Posteromedial barrel septum row C1 layer 1ipsiPMBSRC1L1-0.5
Posteromedial barrel septum row C1 layer 2ipsiPMBSRC1L2-0.5
Posteromedial barrel septum row C1 layer 3ipsiPMBSRC1L3-0.5
Posteromedial barrel septum row C1 layer 4ipsiPMBSRC1L4-0.5
Posteromedial barrel septum row C1 layer 5ipsiPMBSRC1L5-0.5
Posteromedial barrel septum row C2 layer 1ipsiPMBSRC2L1-0.5
Posteromedial barrel septum row C2 layer 2ipsiPMBSRC2L2-0.5
Posteromedial barrel septum row C2 layer 3ipsiPMBSRC2L3-0.5
Posteromedial barrel septum row C2 layer 4ipsiPMBSRC2L4-0.5
Posteromedial barrel septum row C2 layer 5ipsiPMBSRC2L5-0.5
Posteromedial barrel septum row C3 layer 1ipsiPMBSRC3L1-0.5
Posteromedial barrel septum row C3 layer 2ipsiPMBSRC3L2-0.5
Posteromedial barrel septum row C3 layer 3ipsiPMBSRC3L3-0.5
Posteromedial barrel septum row C3 layer 4ipsiPMBSRC3L4-0.5
Posteromedial barrel septum row C3 layer 5ipsiPMBSRC3L5-0.5
Posteromedial barrel septum row C4 layer 1ipsiPMBSRC4L1-0.5
Posteromedial barrel septum row C4 layer 2ipsiPMBSRC4L2-0.5
Posteromedial barrel septum row C4 layer 3ipsiPMBSRC4L3-0.5
Posteromedial barrel septum row C4 layer 4ipsiPMBSRC4L4-0.5
Posteromedial barrel septum row C4 layer 5ipsiPMBSRC4L5-0.5
Posteromedial barrel septum row C5 layer 1ipsiPMBSRC5L1-0.5
Posteromedial barrel septum row C5 layer 2ipsiPMBSRC5L2-0.5
Posteromedial barrel septum row C5 layer 3ipsiPMBSRC5L3-0.5
Posteromedial barrel septum row C5 layer 4ipsiPMBSRC5L4-0.5
Posteromedial barrel septum row C5 layer 5ipsiPMBSRC5L5-0.5
Posteromedial barrel septum row D1 layer 1ipsiPMBSRD1L1-0.5
Posteromedial barrel septum row D1 layer 2ipsiPMBSRD1L2-0.5
Posteromedial barrel septum row D1 layer 3ipsiPMBSRD1L3-0.5
Posteromedial barrel septum row D1 layer 4ipsiPMBSRD1L4-0.5
Posteromedial barrel septum row D1 layer 5ipsiPMBSRD1L5-0.5
Posteromedial barrel septum row D2 layer 1ipsiPMBSRD2L1-0.5
Posteromedial barrel septum row D2 layer 2ipsiPMBSRD2L2-0.5
Posteromedial barrel septum row D2 layer 3ipsiPMBSRD2L3-0.5
Posteromedial barrel septum row D2 layer 4ipsiPMBSRD2L4-0.5
Posteromedial barrel septum row D2 layer 5ipsiPMBSRD2L5-0.5
Posteromedial barrel septum row D3 layer 1ipsiPMBSRD3L1-0.5
Posteromedial barrel septum row D3 layer 2ipsiPMBSRD3L2-0.5
Posteromedial barrel septum row D3 layer 3ipsiPMBSRD3L3-0.5
Posteromedial barrel septum row D3 layer 4ipsiPMBSRD3L4-0.5
Posteromedial barrel septum row D3 layer 5ipsiPMBSRD3L5-0.5
Posteromedial barrel septum row D4 layer 1ipsiPMBSRD4L1-0.5
Posteromedial barrel septum row D4 layer 2ipsiPMBSRD4L2-0.5
Posteromedial barrel septum row D4 layer 3ipsiPMBSRD4L3-0.5
Posteromedial barrel septum row D4 layer 4ipsiPMBSRD4L4-0.5
Posteromedial barrel septum row D4 layer 5ipsiPMBSRD4L5-0.5
Posteromedial barrel septum row D5 layer 1ipsiPMBSRD5L1-0.5
Posteromedial barrel septum row D5 layer 2ipsiPMBSRD5L2-0.5
Posteromedial barrel septum row D5 layer 3ipsiPMBSRD5L3-0.5
Posteromedial barrel septum row D5 layer 4ipsiPMBSRD5L4-0.5
Posteromedial barrel septum row D5 layer 5ipsiPMBSRD5L5-0.5
Posteromedial barrel septum row D6 layer 1ipsiPMBSRD6L1-0.5
Posteromedial barrel septum row D6 layer 2ipsiPMBSRD6L2-0.5
Posteromedial barrel septum row D6 layer 3ipsiPMBSRD6L3-0.5
Posteromedial barrel septum row D6 layer 4ipsiPMBSRD6L4-0.5
Posteromedial barrel septum row D6 layer 5ipsiPMBSRD6L5-0.5
Posteromedial barrel septum row E1 layer 1ipsiPMBSRE1L1-0.5
Posteromedial barrel septum row E1 layer 2ipsiPMBSRE1L2-0.5
Posteromedial barrel septum row E1 layer 3ipsiPMBSRE1L3-0.5
Posteromedial barrel septum row E1 layer 4ipsiPMBSRE1L4-0.5
Posteromedial barrel septum row E1 layer 5ipsiPMBSRE1L5-0.5
Posteromedial barrel septum row E2 layer 1ipsiPMBSRE2L1-0.5
Posteromedial barrel septum row E2 layer 2ipsiPMBSRE2L2-0.5
Posteromedial barrel septum row E2 layer 3ipsiPMBSRE2L3-0.5
Posteromedial barrel septum row E2 layer 4ipsiPMBSRE2L4-0.5
Posteromedial barrel septum row E2 layer 5ipsiPMBSRE2L5-0.5
Posteromedial barrel septum row E3 layer 1ipsiPMBSRE3L1-0.5
Posteromedial barrel septum row E3 layer 2ipsiPMBSRE3L2-0.5
Posteromedial barrel septum row E3 layer 3ipsiPMBSRE3L3-0.5
Posteromedial barrel septum row E3 layer 4ipsiPMBSRE3L4-0.5
Posteromedial barrel septum row E3 layer 5ipsiPMBSRE3L5-0.5
Posteromedial barrel septum row E4 layer 1ipsiPMBSRE4L1-0.5
Posteromedial barrel septum row E4 layer 2ipsiPMBSRE4L2-0.5
Posteromedial barrel septum row E4 layer 3ipsiPMBSRE4L3-0.5
Posteromedial barrel septum row E4 layer 4ipsiPMBSRE4L4-0.5
Posteromedial barrel septum row E4 layer 5ipsiPMBSRE4L5-0.5
Posteromedial barrel septum row E5 layer 1ipsiPMBSRE5L1-0.5
Posteromedial barrel septum row E5 layer 2ipsiPMBSRE5L2-0.5
Posteromedial barrel septum row E5 layer 3ipsiPMBSRE5L3-0.5
Posteromedial barrel septum row E5 layer 4ipsiPMBSRE5L4-0.5
Posteromedial barrel septum row E5 layer 5ipsiPMBSRE5L5-0.5
Posteromedial barrel septum row E6 layer 1ipsiPMBSRE6L1-0.5
Posteromedial barrel septum row E6 layer 2ipsiPMBSRE6L2-0.5
Posteromedial barrel septum row E6 layer 3ipsiPMBSRE6L3-0.5
Posteromedial barrel septum row E6 layer 4ipsiPMBSRE6L4-0.5
Posteromedial barrel septum row E6 layer 5ipsiPMBSRE6L5-0.5
Posteromedial barrel septum row E7 layer 1ipsiPMBSRE7L1-0.5
Posteromedial barrel septum row E7 layer 2ipsiPMBSRE7L2-0.5
Posteromedial barrel septum row E7 layer 3ipsiPMBSRE7L3-0.5
Posteromedial barrel septum row E7 layer 4ipsiPMBSRE7L4-0.5
Posteromedial barrel septum row E7 layer 5ipsiPMBSRE7L5-0.5
Posteromedial barrel subfield A1 layer 1ipsiPMBSFA1L1-0.5
Posteromedial barrel subfield A1 layer 5ipsiPMBSFA1L5-0.5
Posteromedial barrel subfield A2 layer 1ipsiPMBSFA2L1-0.5
Posteromedial barrel subfield A2 layer 5ipsiPMBSFA2L5-0.5
Posteromedial barrel subfield A3 layer 1ipsiPMBSFA3L1-0.5
Posteromedial barrel subfield A3 layer 5ipsiPMBSFA3L5-0.5
Posteromedial barrel subfield A4 layer 1ipsiPMBSFA4L1-0.5
Posteromedial barrel subfield A4 layer 5ipsiPMBSFA4L5-0.5
Posteromedial barrel subfield B1 layer 1ipsiPMBSFB1L1-0.5
Posteromedial barrel subfield B1 layer 5ipsiPMBSFB1L5-0.5
Posteromedial barrel subfield B2 layer 1ipsiPMBSFB2L1-0.5
Posteromedial barrel subfield B2 layer 5ipsiPMBSFB2L5-0.5
Posteromedial barrel subfield B3 layer 1ipsiPMBSFB3L1-0.5
Posteromedial barrel subfield B3 layer 5ipsiPMBSFB3L5-0.5
Posteromedial barrel subfield B4 layer 1ipsiPMBSFB4L1-0.5
Posteromedial barrel subfield B4 layer 5ipsiPMBSFB4L5-0.5
Posteromedial barrel subfield C1 layer 1ipsiPMBSFC1L1-0.5
Posteromedial barrel subfield C1 layer 5ipsiPMBSFC1L5-0.5
Posteromedial barrel subfield C2 layer 1ipsiPMBSFC2L1-0.5
Posteromedial barrel subfield C2 layer 5ipsiPMBSFC2L5-0.5
Posteromedial barrel subfield C3 layer 1ipsiPMBSFC3L1-0.5
Posteromedial barrel subfield C3 layer 5ipsiPMBSFC3L5-0.5
Posteromedial barrel subfield C4 layer 1ipsiPMBSFC4L1-0.5
Posteromedial barrel subfield C4 layer 5ipsiPMBSFC4L5-0.5
Posteromedial barrel subfield C5 layer 1ipsiPMBSFC5L1-0.5
Posteromedial barrel subfield C5 layer 5ipsiPMBSFC5L5-0.5
Posteromedial barrel subfield D1 layer 1ipsiPMBSFD1L1-0.5
Posteromedial barrel subfield D1 layer 5ipsiPMBSFD1L5-0.5
Posteromedial barrel subfield D2 layer 1ipsiPMBSFD2L1-0.5
Posteromedial barrel subfield D2 layer 5ipsiPMBSFD2L5-0.5
Posteromedial barrel subfield D3 layer 1ipsiPMBSFD3L1-0.5
Posteromedial barrel subfield D3 layer 5ipsiPMBSFD3L5-0.5
Posteromedial barrel subfield D4 layer 1ipsiPMBSFD4L1-0.5
Posteromedial barrel subfield D4 layer 5ipsiPMBSFD4L5-0.5
Posteromedial barrel subfield D5 layer 1ipsiPMBSFD5L1-0.5
Posteromedial barrel subfield D5 layer 5ipsiPMBSFD5L5-0.5
Posteromedial barrel subfield D6 layer 1ipsiPMBSFD6L1-0.5
Posteromedial barrel subfield D6 layer 5ipsiPMBSFD6L5-0.5
Posteromedial barrel subfield E1 layer 1ipsiPMBSFE1L1-0.5
Posteromedial barrel subfield E1 layer 5ipsiPMBSFE1L5-0.5
Posteromedial barrel subfield E2 layer 1ipsiPMBSFE2L1-0.5
Posteromedial barrel subfield E2 layer 5ipsiPMBSFE2L5-0.5
Posteromedial barrel subfield E3 layer 1ipsiPMBSFE3L1-0.5
Posteromedial barrel subfield E3 layer 5ipsiPMBSFE3L5-0.5
Posteromedial barrel subfield E4 layer 1ipsiPMBSFE4L1-0.5
Posteromedial barrel subfield E4 layer 5ipsiPMBSFE4L5-0.5
Posteromedial barrel subfield E5 layer 1ipsiPMBSFE5L1-0.5
Posteromedial barrel subfield E5 layer 5ipsiPMBSFE5L5-0.5
Posteromedial barrel subfield E6 layer 1ipsiPMBSFE6L1-0.5
Posteromedial barrel subfield E6 layer 5ipsiPMBSFE6L5-0.5
Posteromedial barrel subfield E7 layer 1ipsiPMBSFE7L1-0.5
Posteromedial barrel subfield E7 layer 5ipsiPMBSFE7L5-0.5
Primary somatosensory cortex barrel field lateral part layer 3ipsiS1BFL32
Primary somatosensory cortex barrel field lateral part layer 4ipsiS1BFL41
Primary somatosensory cortex layer 5 aipsiS1L5a3
Primary somatosensory cortex layer 4ipsiS1L43
Primary visual cortex layer 1ipsiV1L12
Secondary visual cortex medial area layer 1ipsiV2ML12
Secondary visual cortex lateral area layer 1ipsiV2LL12

Input from

NameSideAbbr.WeightDetails
Locus coeruleuscontraLC1
Mesencephalic reticular formationcontraMRF3
Pontine reticular nucleus oral partcontraPnO3
Pontine reticular nucleus oral part central partcontraPnOC1
Pontine reticular nucleus oral part dorsal partcontraPnOd1
Pontine reticular nucleus caudal partcontraPNC3
Gigantocellular reticular nucleuscontraGi3
Dorsal part of spinal trigeminal nucleus oral partcontraSp5OD2.5
Lateral agranular prefrontal cortexcontraAGl1
Internal basilar nucleus C1contraIBC11
Ventral horn C1contraVHC1-0.5
Intermediate zone C1contraizVHC1-0.5
Internal basilar nucleus C2contraIBC21
Ventral horn C2contraVHC2-0.5
Intermediate zone C2contraizVHC2-0.5
Intermediate zone C3contraizVHC31
Intermediate zone C4contraizVHC41
Intermediate zone C5contraizVHC51
Intermediate zone C6contraizVHC61
Intermediate zone C7contraizVHC71
Intermediate zone C8contraizVHC81
Intermediate zone T1contraizVHT11
Intermediate zone T2contraizVHT21
Intermediate zone T3contraizVHT31
Intermediate zone T4contraizVHT41
Intermediate zone T5contraizVHT51
Intermediate zone T6contraizVHT61
Intermediate zone T7contraizVHT71
Intermediate zone T8contraizVHT81
Intermediate zone T9contraizVHT91
Intermediate zone T10contraizVHT101
Intermediate zone T11contraizVHT111
Intermediate zone T12contraizVHT121
Intermediate zone T13contraizVHT131
Intermediate zone L3contraizVHL3-0.5
Spinal cord layer 7 L3contraSCL7L3-0.5
Spinal cord layer 8 L3contraSCL8L3-0.5
Intermediate zone L4contraizVHL4-0.5
Spinal cord layer 7 L4contraSCL7L4-0.5
Spinal cord layer 8 L4contraSCL8L4-0.5
Intermediate zone L5contraizVHL5-0.5
Spinal cord layer 7 L5contraSCL7L5-0.5
Spinal cord layer 8 L5contraSCL8L5-0.5
Intermediate zone L6contraizVHL6-0.5
Spinal cord layer 7 L6contraSCL7L6-0.5
Spinal cord layer 8 L6contraSCL8L6-0.5
Superior colliculusipsiSC3
Laterodorsal tegmental nucleusipsiLDTg-0.5
Pedunculopontine tegmental nucleusipsiPPTg-0.5
Locus coeruleusipsiLC3
Mesencephalic reticular formationipsiMRF2
Pontine reticular nucleus oral partipsiPnO2
Pontine reticular nucleus oral part central partipsiPnOC3
Pontine reticular nucleus oral part dorsal partipsiPnOd3
Pontine reticular nucleus caudal partipsiPNC2
Parabrachial nucleus ventral partipsiPBV2
Gigantocellular reticular nucleusipsiGi2
Parvicellular reticular nucleusipsiPCRt3
Principal sensory trigeminal nucleusipsiPr5-0.5
Dorsal part of spinal trigeminal nucleus oral partipsiSp5OD2
Spinal vestibular nucleusipsiSpVe-0.5
Dorsal raphe nucleusipsiDR1
Median raphe nucleusipsiMnR1
Reticular thalamic nucleusipsiRt2
Zona incertaipsiZI-0.5
Zona incerta dorsal partipsiZID1
Zona incerta medial partipsiZIm-0.5
Zona incerta ventral partipsiZIV-0.5
Zona incerta ventral part lateral partipsiZIVL3
Lateral agranular prefrontal cortexipsiAGl2
Primary motor cortex genital areaipsiM1ge2
Primary somatosensory cortexipsiS12
Primary somatosensory cortex barrel field layer 5b pyramidal tract neuronsipsiS1BF5bpt-0.5
Primary somatosensory cortex layer 5ipsiS1L51
Primary somatosensory cortex layer 6bipsiS1L6b2
Secondary somatosensory cortexipsiS22
Ventral horn C1ipsiVHC1-0.5
Ventral horn C2ipsiVHC2-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





Homepage | Staff | neuroVIISAS | Rat connectome | Other connectomes | Neuroimaging | Neurodegeneration | Students | Links | Publications