University of Rostock

Department of Anatomy

Neuroscience Group

  Homepage

 Staff

 neuroVIISAS

 Rat connectome

 Other connectomes

 Neuroimaging

 Neurodegeneration

 Neuroproteomics

 Students

 Links

 Publications

Rat connectome



Substantia nigra caudal part left


Abbreviation
SNcp
Color       
Superior regionsSubstantia nigra A9

SynonymsAbbr.Language
Caudal part of substantia nigra  
Caudal substantia nigra  
Substantia nigra caudal partSNcpEng

SubregionsSide
Caudal one third of the substantia nigraleft
Caudalmost levels of the substantia nigraleft
Dorsolateral part of the caudal substantia nigraleft
Lateral part of the caudal extent of the substantia nigraleft
Substantia nigra most ventral lamina of the caudal partleft
Intermediate part of the caudal substantia nigraleft

Output to

NameSideAbbr.WeightDetails
Inferior colliculusipsiICOL-0.5
Substantia nigra A9ipsiSN-0.5
Ventral tegmental area A10ipsiVTA-0.5
Amygdaloid complexipsiAC-0.5
Caudate putamenipsiCPu3
Caudal basal caudate putamenipsiCPuCB-0.5
Dorsolateral striatumipsiCPudl-0.5
Posterior caudate putamenipsiCPup2
Rostrodorsal striatumipsiCPurd-0.5
Ventral striatumipsiCPuv2
Entorhinal cortexipsiEnt-0.5
Caudate putamencontraCPu0.5

Input from

NameSideAbbr.WeightDetails
Central grayipsiCG-0.5
Peduncularpontine nucleusipsiPPN-0.5
Pontine reticular nucleusipsiPRN-0.5
Parabrachial nucleusipsiPB-0.5
Dorsal raphe nucleusipsiDR3
Dorsal raphe nucleus lateral wingipsiDRlw-0.5
Central raphe nucleusipsiCRN-0.5
Globus pallidusipsiGP-0.5
Caudate putamenipsiCPu-0.5
Subthalamic nucleusipsiSTh2
Central raphe nucleuscontraCRN1

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





Homepage | Staff | neuroVIISAS | Rat connectome | Other connectomes | Neuroimaging | Neurodegeneration | Students | Links | Publications