University of Rostock

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Rat connectome



Frontal cortex area 1 layer 3 left


Abbreviation
Fr1L3
Color       
Superior regionsFrontal cortex area 1 layers

SynonymsAbbr.Language
Frontal cortex area 1 layer 3Fr1L3 

Output to

NameSideAbbr.WeightDetails
Posterior hypothalamic nucleusipsiPH3
Caudate putamenipsiCPu-0.5
Dorsolateral striatumipsiCPudl-0.5
Ventrolateral striatumipsiCPuvl-0.5
Frontal cortex area 1ipsiFr13
Frontal cortex area 2ipsiFr23
Parietal cortex posterior areaipsiParP2
Temporal cortexipsiTE1.5
Whisker motor cortex subfieldsipsiWMCxS-0.5
Medial prefrontal cortex layer 5ipsimPFCL53
Medial prefrontal cortex layer 6ipsimPFCL63
Medial prefrontal cortex layer 3ipsimPFCL33
Medial prefrontal cortex layer 4ipsimPFCL43
Primary visual cortex layer 1ipsiV1L10.5
Primary visual cortex layer 2ipsiV1L20.5
Primary visual cortex layer 3ipsiV1L30.5
Primary visual cortex layer 4ipsiV1L40.5
Primary visual cortex layer 5ipsiV1L50.5
Secondary visual cortex medial area layer 3ipsiV2ML31
Secondary visual cortex medial area layer 2ipsiV2ML21
Secondary visual cortex lateral areaipsiV2L1.5
Secondary visual cortex lateral area supragranular layersipsiV2LsgL1
Orbital cortexipsiOrC2
Posterior hypothalamic nucleuscontraPH0.5
Frontal cortex area 1contraFr13
Frontal cortex area 2contraFr23
Auditory regionscontraAU3
Medial prefrontal cortex layer 5contramPFCL53
Medial prefrontal cortex layer 6contramPFCL63
Medial prefrontal cortex layer 3contramPFCL33
Medial prefrontal cortex layer 4contramPFCL43
Secondary visual cortex medial area layer 3contraV2ML30.5
Secondary visual cortex medial area layer 2contraV2ML20.5
Orbital cortexcontraOrC1

Input from

NameSideAbbr.WeightDetails
Caudolateral part of the gelatinosus thalamic nucleusipsiGCL3
Central ventromedial thalamic nucleusipsiCeVM3
Temporal association area 2 dorsal partipsiTe2D1
Superficial layers of the posterior part of the agranular insular cortexipsiAIPsL0.5
Agranular insular cortex posterior part layer 5ipsiAIPL53
Agranular insular cortex posterior part layer 6ipsiAIPL62
Perirhinal cortex anterior portion layer 5ipsiPRhaL53
Whisker motor cortex subfieldsipsiWMCxS-0.5
Frontal cortex area 2contraFr21.5
Superficial layers of the posterior part of the agranular insular cortexcontraAIPsL0.5
Agranular insular cortex posterior part layer 5contraAIPL51.5
Agranular insular cortex posterior part layer 6contraAIPL61
Whisker motor cortex subfieldscontraWMCxS2

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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