University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Mesopontine tegmental area rostral part right


Abbreviation
TGAmr
Color       
Superior regionsMesopontine tegmental area

SynonymsAbbr.Language
Mesopontine tegmental area rostral partTGAmrEng

Output to

NameSideAbbr.WeightDetails
Cervical segmentscontraCSeg2
Dorsal horn C5contraDHC52
Ventral horn C5contraVHC52
Thoracal segmentscontraTSeg0.5
Lumbar segmentscontraLSeg2
Sacral segmentscontraSSeg0.5
Substantia nigra compact partipsiSNC1.5
Substantia nigra reticular partipsiSNR1.5
Locus coeruleusipsiLC1
Deep mesencephalic nucleusipsiDpMe2
Dorsal raphe nucleusipsiDR1.5
Basal forebrainipsiBAF2
Tuberomammillary nucleusipsiTuM1
Lateral hypothalamic areaipsiLH2
Intralaminar nucleiipsiILN1.5
Zona incertaipsiZI2
Caudate putamenipsiCPu1
Frontal association cortexipsiFrA0
Septal regionipsiSER1.5
Cervical segmentsipsiCSeg2
Dorsal horn C5ipsiDHC52
Ventral horn C5ipsiVHC52
Thoracal segmentsipsiTSeg1
Lumbar segmentsipsiLSeg2
Sacral segmentsipsiSSeg1

Input from

NameSideAbbr.WeightDetails
Substantia nigra compact partipsiSNC1.5
Substantia nigra reticular partipsiSNR1.5
Locus coeruleusipsiLC1
Deep mesencephalic nucleusipsiDpMe2
Dorsal raphe nucleusipsiDR1.5
Basal forebrainipsiBAF2
Tuberomammillary nucleusipsiTuM0
Lateral hypothalamic areaipsiLH2
Intralaminar nucleiipsiILN0
Zona incertaipsiZI2
Caudate putamenipsiCPu0
Frontal association cortexipsiFrA2
Septal regionipsiSER1

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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