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Rat connectome



Anterior part of the claustrum right


Abbreviation
ACl
Color       
Superior regionsClaustrum

SynonymsAbbr.Language
Anterior part of the claustrumAClEng

SubregionsSide
Dorsal half of the anterior part of the claustrumright

Output to

NameSideAbbr.WeightDetails
Retrosplenial agranular cortexcontraRSA1.5
Retrosplenial granular cortexcontraRSGra1.5
Cingulate cortexcontraCg1.5
Frontal association cortexcontraFrA0
Auditory regionscontraAU1
Somatomotoric regionscontraSMR0.5
Motoric regionscontraM2
Sensory regionscontraSR1
Posterior two third of area 17contraV1pt0.5
Posterior half of the primary visual cortexcontraV1ph0
Secondary visual cortex medial areacontraV2M0
Posterior two third of secondary visual cortexcontraV2pt0.5
Dorsal endopiriform nucleusipsiDEn1
Lateral hypothalamic areaipsiLH1
Dorsomedial hypothalamic nucleus dorsal partipsiDMD1
Centrolateral thalamic nucleusipsiCL0.5
Paracentral thalamic nucleusipsiPC1
Rhomboid thalamic nucleusipsiRh3
Mediodorsal thalamic nucleusipsiMD2
Intermediodorsal thalamic nucleusipsiIMD2
Submedius thalamic nucleusipsiSub3
Paraventricular thalamic nucleusipsiPV2
Reuniens thalamic nucleusipsiRe3
Laterodorsal thalamic nucleusipsiLD0.5
Posterior groupipsiPTG0.5
Zona incertaipsiZI1
Basolateral amygdaloid nucleusipsiBL1
Bed nucleus of the stria terminalisipsiBST0.5
Central amygdaloid nucleusipsiCe1
Medial amygdaloid nucleusipsiMe1
Ventral pallidumipsiVP0.5
Accumbens nucleusipsiAc1
Accumbens nucleus coreipsiAcbC1
Accumbens nucleus shellipsiAcbSh3
Lateral entorhinal cortexipsiLEnt2
Retrosplenial regionsipsiRS1
Retrosplenial agranular cortexipsiRSA3
Retrosplenial granular cortexipsiRSGra3
Cingulate cortexipsiCg3
Prelimbic cortexipsiPrL2
Infralimbic cortexipsiIL1
Frontal association cortexipsiFrA3
Parietal association cortexipsiPtA1
Temporal association cortex 1ipsiTeA1
Auditory regionsipsiAU2
Agranular insular cortexipsiAI2
Dysgranular insular cortexipsiDI2
Granular insular cortexipsiGI2
Perirhinal cortexipsiA353
Ectorhinal cortexipsiA361
Somatomotoric regionsipsiSMR1.5
Motoric regionsipsiM3
Lateral agranular prefrontal cortexipsiAGl2
Medial agranular prefrontal cortexipsiAGm3
Sensory regionsipsiSR2
Primary somatosensory cortexipsiS10.5
Visual regionsipsiVR1
Posterior two third of area 17ipsiV1pt1.5
Secondary visual cortex medial areaipsiV2M1
Secondary visual cortex lateral areaipsiV2L0.5
Posterior two third of secondary visual cortexipsiV2pt1.5
Lateral orbital cortexipsiLO3
Medial orbital cortexipsiMO2
Ventral orbital cortexipsiVO2
Anterior olfactory nucleus medial partipsiAONm2
Anterior olfactory nucleus posterior partipsiAONp3
Anterior olfactory nucleus ventral partipsiAONv2

Input from

NameSideAbbr.WeightDetails
Lateral agranular prefrontal cortex layer 5contraAGlL50.5
Lateral agranular prefrontal cortex layer 6contraAGlL61.5
Substantia nigra compact partipsiSNC3
Lateral hypothalamic areaipsiLH1
Central medial thalamic nucleusipsiCM3
Centrolateral thalamic nucleusipsiCL3
Paracentral thalamic nucleusipsiPC2
Rhomboid thalamic nucleusipsiRh1
Rostral suprageniculate thalamic nucleusipsiRSG1
Intermediodorsal thalamic nucleusipsiIMD1
Paraventricular thalamic nucleusipsiPV1
Reuniens thalamic nucleusipsiRe1
Ventromedial thalamic nucleusipsiVM1
Zona incertaipsiZI1
Anterior basolateral nucleusipsiBLA3
Ventral basolateral nucleusipsiBLV1
Lateral amygdaloid nucleusipsiLA1
Lateral entorhinal cortexipsiLEnt1
Medial entorhinal cortexipsiMEnt1
Retrosplenial agranular cortexipsiRSA1
Cingulate cortex area 1ipsiCg13
Prelimbic cortexipsiPrL3
Infralimbic cortexipsiIL1
Frontal association cortexipsiFrA1
Temporal association cortex 1ipsiTeA2
Agranular insular cortexipsiAI1
Granular insular cortexipsiGI1
Perirhinal cortexipsiA352
Ectorhinal cortexipsiA362
Lateral agranular prefrontal cortexipsiAGl1
Lateral agranular prefrontal cortex layer 5ipsiAGlL51
Lateral agranular prefrontal cortex layer 6ipsiAGlL64
Medial agranular prefrontal cortexipsiAGm3
Primary somatosensory cortexipsiS11
Primary visual cortexipsiV10.5
Secondary visual cortex medial areaipsiV2M2
Secondary visual cortex lateral areaipsiV2L0.5
Lateral orbital cortexipsiLO2
Medial orbital cortexipsiMO3
Ventral orbital cortexipsiVO3

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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