University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Anterior striatum right


Abbreviation
AStri
Color       
Superior regionsCaudate putamen

SynonymsAbbr.Language
Anterior striatumAStri 
Caudate putamen anterior part Eng
Striatum at coronal levels Eng

SubregionsSide
Anterior core region of the caudate putamenright
Dorsolateral part of the anterior striatumright
Anteriorposterior part of caudate putamenright
Anterodorsal part of the caudate putamenright
Anteromedial striatumright
Anteroventral segment of the striatumright
Caudate putamen anteromedianright

Output to

NameSideAbbr.WeightDetails
Substantia nigra A9ipsiSN3
Substantia nigra compact partipsiSNC2.5
Substantia nigra reticular partipsiSNR2.5
Ventral tegmental area A10ipsiVTA0.5
Amygdaloid complexipsiAC1
Medial globus pallidusipsiMGP3
Middle cingulate cortexipsiMCC-0.5
Posterior cingulate cortexipsiPCC-0.5

Input from

NameSideAbbr.WeightDetails
Lateral agranular prefrontal cortex layer 5contraAGlL5-0.5
Lateral agranular prefrontal cortex layer 5acontraAGlL5a-0.5
Substantia nigra A9ipsiSN3
Substantia nigra caudolateral partipsiSNcL-0.5
Substantia nigra compact partipsiSNC3
Substantia nigra compact part medial tieripsiSNCM4
Substantia nigra reticular partipsiSNR3
Substantia nigra reticular part medial tieripsiSNRm0.5
Ventral tegmental area A10ipsiVTA2
Ventral tegmental area A10 ventral partipsiVTAv2
Mesencephalic reticular formationipsiMRF-0.5
Central medial thalamic nucleusipsiCM2
Central medial thalamic nucleus caudal partipsiCMca0.5
Centrolateral thalamic nucleusipsiCL2
Paracentral thalamic nucleusipsiPC2
Parafascicular thalamic nucleusipsiPF0
Paratenial thalamic nucleusipsiPT3
Amygdaloid complexipsiAC1
Medial globus pallidusipsiMGP3
Entorhinal cortexipsiEnt1
Prelimbic cortex deep layersipsiPrLDL-2
Infralimbic cortex deep layersipsiILDL-2
Frontal association cortexipsiFrA-0.5
Agranular insular cortex dorsal part deep layersipsiAIDdL-2
Agranular insular cortex posterior deep layersipsiAIPdL-2
Dorsal peduncular cortex deep layersipsiDPdL-2
Lateral agranular prefrontal cortex layer 5ipsiAGlL53
Lateral agranular prefrontal cortex layer 5aipsiAGlL5a3
Primary somatosensory cortex layer 5ipsiS1L53
Primary somatosensory cortex layer 5 aipsiS1L5a3
Somatosensory cortex layer 5bipsiSRL5b1
Lateral orbital cortex deep layersipsiLOLad1
Medial orbital cortex deep layersipsiMOcxdL-2
Ventrolateral orbital area deep layersipsiVLOd-2

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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