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Rat connectome



Primary somatosensory cortex layer 5 a right


Abbreviation
S1L5a
Color       
Superior regionsPrimary somatosensory cortex layer 5

SynonymsAbbr.Language
Primary somatosensory cortex layer 5 aS1L5aEng
Upper layer 5 of primary somatosensory cortex Eng

SubregionsSide
Primary somatosensory cortex layer 5 a pyramidal cellsright
Primary somatosensory cortex layer 5 a slender untufted pyramidal neuronright
Primary somatosensory cortex layer 5 a thick tufted pyramidal neuronright
Primary somatosensory cortex lower part of layer 5 aright
Primary somatosensory cortex most superficial part of layer 5 aright

Output to

NameSideAbbr.WeightDetails
Caudate putamencontraCPu1
Dorsal striatum central partcontraCPudc1
Primary somatosensory cortex hindlimb region lateral partcontraS1HLL0.5
Caudate putamenipsiCPu3
Anterior striatumipsiAStri3
Dorsal striatum central partipsiCPudc3
Striatal matrix compartmentipsiSMC3
Striatal patch compartmentipsiSPC0
Agranular insular cortexipsiAI1
Primary somatosensory cortex hindlimb region lateral partipsiS1HLL1.5

Input from

NameSideAbbr.WeightDetails
Primary somatosensory cortexcontraS13
Primary somatosensory cortex hindlimb region lateral partcontraS1HLL0.5
Central medial thalamic nucleusipsiCM-0.5
Centrolateral thalamic nucleusipsiCL-0.5
Paracentral thalamic nucleusipsiPC-0.5
Posterior thalamic nuclear groupipsiPo-0.5
Posterior thalamic nuclear group medial partipsiPoMe3
Intralaminar nucleiipsiILN-0.5
Primary somatosensory cortex hindlimb region lateral partipsiS1HLL1.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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