University of Rostock

Department of Anatomy

Neuroscience Group

 Homepage

 Staff

 neuroVIISAS

 Rat connectome

 Other connectomes

 Neuroimaging

 Neurodegeneration

 Neuroproteomics

 Students

 Links

 Publications

Rat connectome



Centre median nucleus left


Abbreviation
CeMe
Color       
Superior regionsIntralaminar nuclei of the dorsal thalamus

SynonymsAbbr.Language
Centermedian-parafascicular nucleusCM-Pf 
Centre median Eng
Nucleus thalamic center median Eng
Centromedian thalamus Eng
Centre median nucleusCeMeEng
Central median thalamic nucleus Eng

Output to

NameSideAbbr.WeightDetails
Reticular thalamic nucleus rostral partipsiRtr2
Amygdaloid complexipsiAC0
Basal gangliaipsiBG3
Accumbens nucleus coreipsiAcbC2
Caudate putamenipsiCPu2
Medial part of the caudate putamenipsiCPuMed-0.5
Parahippocampal regionipsiPHR1
Cingulate cortexipsiCg1
Prelimbic cortex dorsal partipsiPrLd1
Frontal association cortex layer 1ipsiFrALL11.5
Frontal association cortex layer 4ipsiFrALL41.5
Frontal association cortex layer 5ipsiFrALL51.5
Frontal association cortex layer 6ipsiFrALL61.5
Frontal cortex area 2 layer 4ipsiFr2L41.5
Frontal cortex area 2 layer 1ipsiFr2L11.5
Frontal cortex area 2 layer 5ipsiFr2L51.5
Frontal cortex area 2 layer 6ipsiFr2L61.5
Parietal association cortex layer 4ipsiParPLa41.5
Parietal association cortex layer 5ipsiParPLa51.5
Parietal association cortex layer 6ipsiParPLa61.5
Parietal association cortex layer 1ipsiParPLa11.5
Caudal half of agranular insular area in the fundus and dorsal lip of rhinal sulcusipsiAIChF2
Agranular insular cortex dorsal part layer 4ipsiAIDL41.5
Agranular insular cortex dorsal part layer 1ipsiAIDL11.5
Agranular insular cortex layer 1ipsiAIL11.5
Agranular insular cortex layer 4ipsiAIL41.5
Motoric regionsipsiM3
Lateral agranular prefrontal cortex layer 5ipsiAGlL51.5
Lateral agranular prefrontal cortex layer 6ipsiAGlL61.5
Medial agranular prefrontal cortex layer 1ipsiAGmL11.5
Medial agranular prefrontal cortex layer 4ipsiAGmL41.5
Medial agranular prefrontal cortex layer 5ipsiAGmL51.5
Medial agranular prefrontal cortex layer 6ipsiAGmL61.5
Primary somatosensory cortexipsiS13
Rostral whisker areaipsiRS1BF-0.5
Primary somatosensory cortex layer 5ipsiS1L51.5
Primary somatosensory cortex layer 6ipsiS1L61.5
Primary somatosensory cortex layer 4ipsiS1L41.5
Primary somatosensory cortex layer 1ipsiS1L11.5
Dorsolateral part of the primary somatosensory cortexipsiS1DL1
Secondary somatosensory cortexipsiS23
Visual regionsipsiVR3

Input from

NameSideAbbr.WeightDetails
Ventral periaqueductal grayipsiVPAG0
Periventricular gray matteripsiPVG0
Inferior colliculusipsiICOL0.5
Superior colliculusipsiSC0.5
Peduncularpontine nucleusipsiPPN-0.5
Laterodorsal tegmental nucleusipsiLDTg1
Dorsal tegmental nucleusipsiDTg0
Pedunculopontine tegmental nucleus pars compactaipsiPPNC2
Pontine reticular nucleusipsiPRN-0.5
Cuneiforme nucleusipsiCnF-0.5
Cuneiforme nucleus ventral partipsiCnFV2
Peribrachial cuneiforme nucleusipsiCnFPB2
Gigantocellular reticular nucleusipsiGi3
Dorsal raphe nucleusipsiDR0
Median raphe nucleusipsiMnR0
Pontine raphe nucleusipsiPnR0
Raphe magnus nucleusipsiRMg0
Anterior cortical amygdaloid nucleusipsiACo0.5
Caudate putamenipsiCPu-0.5
Rostral forelimb area of SmithipsiRFA-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





Homepage | Staff | neuroVIISAS | Rat connectome | Other connectomes | Neuroimaging | Neurodegeneration | Students | Links | Publications