University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Ventromedial thalamic nucleus caudal part left


Abbreviation
VMc
Color       
Superior regionsVentromedial thalamic nucleus

SynonymsAbbr.Language
Ventromedial thalamic nucleus caudal partVMcEng

SubregionsSide
Ventromedial thalamic nucleus caudal part lateral partleft
Ventromedial thalamic nucleus caudal two thirdsleft

Output to

NameSideAbbr.WeightDetails
Oculomotor systemipsiOCS2
Perirhinal cortexipsiA35-0.5
Ectorhinal cortexipsiA36-0.5
Forelimb motor cortexipsiFMCx2
Whiskers motor cortexipsiWMCx2

Input from

NameSideAbbr.WeightDetails
Central gray lateral ventral partipsiCGVD1
Paralemniscal nucleusipsiPL0
Nucleus of DarkschewitschipsiDk4
Lateral periaqueductal grayipsiLPAG1
Periaqueductal gray rostral poleipsiPAGr2
Periaqueductal gray rostrolateral partipsiPAGRL2
Ventrolateral periaqueductal grayipsiVLPAG1.5
Superior colliculusipsiSC-0.5
Superior colliculus lateral partipsiSCL2.5
Superior colliculus lateral part deep layersipsiSCdL-0.5
Superior colliculus lateral part intermediate layeripsiSCLayi-0.5
Tegmental areaipsiTGA2.5
Central tegmental fieldipsiTGAC4
Subpeduncular tegmental nucleusipsiSPTg3
Substantia nigra A9ipsiSN2
Substantia nigra compact partipsiSNC2
Substantia nigra reticular partipsiSNR4
Ventral tegmental area A10ipsiVTA-0.5
Parabrachial pigmented nucleusipsiPBP1
Caudal linear nucleus of the rapheipsiCLi1
Laterodorsal tegmental nucleusipsiLDTg3
Dorsal tegmental nucleusipsiDTg1
Pedunculopontine tegmental nucleusipsiPPTg3
Interstitial nucleus of CajalipsiInC3
Cerebellar hemisphereipsiCEREBH0.5
Cerebellar nucleiipsiDCeN2
Lateral cerebellar nucleusipsiCERL0.5
A5 noradrenaline cellsipsiA51
Barringtons nucleusipsiBar1
Locus coeruleusipsiLC4
Nucleus incertusipsiNI0
Dorsomedial tegmental areaipsiDMTg3
Prepositus nucleusipsiPr1
Reticular systemipsiRF-0.5
Intermediate reticular nucleusipsiIRt1
Deep mesencephalic nucleusipsiDpMe4
Pontine reticular nucleus oral partipsiPnO3
Pontine reticular nucleus ventral partipsiPnV0
Pontine reticular nucleus caudal partipsiPNC2
Peribrachial regionipsiPBR1
Cuneiforme nucleusipsiCnF1
Parabrachial nucleusipsiPB2
Parabrachial nucleus external divison lateral partipsiPBeDL2
Gigantocellular reticular nucleusipsiGi3
Gigantocellular reticular nucleus alpha partipsiGiA1
Medullary reticular nucleusipsiMdD3
Subnucleus reticularis dorsalisipsiSRD4
Medullary reticular nucleus ventral partipsiMdV1
Parvicellular reticular nucleusipsiPCRt2
Subcoeruleus nucleusipsiSubC3
Principal sensory trigeminal nucleusipsiPr53
Spinal trigeminal nucleus caudal partipsiSp5C2
Spinal trigeminal nucleus interpolar partipsiSp5I0
Spinal trigeminal nucleus oral partipsiSp5O1
Vestibular nucleiipsiVnc1
Nucleus of the solitary tractipsiSol1
Dorsal raphe nucleusipsiDR1
Dorsal raphe nucleus caudal partipsiDRC1
Dorsal raphe nucleus dorsal partipsiDRD2
Dorsal raphe nucleus ventral partipsiDRV2
Dorsal raphe nucleus ventrolateral partipsiDRVL3
Rostral linear nucleus of the rapheipsiRLi0
Median raphe nucleusipsiMnR0
Paramedian raphe nucleusipsiPMnR2
Raphe interpositus nucleusipsiRIP2
Raphe magnus nucleusipsiRMg1
Raphe obscurus nucleusipsiROb0
Raphe pallidus nucleusipsiRPa0
Rostral ventrolateral medullaipsiRVLM1
Cuneate nucleusipsiCu2
Gracile nucleus principal partipsiGr0
Dorsal paragigantocellular nucleusipsiDPGi3
Lateral paragigantocellular nucleusipsiLPGi1
Endopiriform systemipsiEnN0.5
Substantia innominataipsiSI0.5
HypothalamusipsiHYPO2
A8 dopamine cells retrorubral groupipsiRRF1
Midline group of the dorsal thalamus posterior partipsiMTNp-0.5
Reticular thalamic nucleusipsiRt4
Zona incertaipsiZI2
Lateral habenular nucleusipsiLHb-0.5
Amygdaloid complexipsiAC0.5
Basal nucleusipsiBnc0.5
Anterior amygdaloid areaipsiAA0.5
Cortical amygdaloid nucleusipsiCAn0.5
Dorsal part of claustrumipsiDCl-0.5
Medial globus pallidus caudal partipsiMGPc2
Medial globus pallidus central partipsiMGPce2
Medial globus pallidus rostral partipsiMGPr2
Ventral pallidumipsiVP-0.5
Cerebral cortexipsiCEC2
Frontal association cortexipsiFrA4
Frontal association cortex dorsal partipsiFrAd-0.5
Frontal association cortex layer 5ipsiFrALL50.5
Frontal association cortex layer 6ipsiFrALL62.5
Frontal association cortex medial partipsiFrAM-0.5
Frontal association cortex sulcal wallsipsiFrAsu-0.5
Interpeduncular nucleusipsiIP0
Central gray lateral ventral partcontraCGVD1
Anterior interposed nucleuscontraAIN2
Lateral cerebellar nucleuscontraCERL3
Medial cerebellar nucleuscontraMed2
Reticular systemcontraRF-0.5
Peribrachial regioncontraPBR1
Parabrachial nucleuscontraPB1
Medullary reticular nucleuscontraMdD-0.5
Dorsal raphe nucleuscontraDR1
Reticular thalamic nucleuscontraRt1
Reticular thalamic nucleus homologous sectorcontraRthLs1
Lateral habenular nucleuscontraLHb-0.5
Cerebral cortexcontraCEC0.5
Medial sulcal areacontraMeSA0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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