University of Rostock

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Rat connectome



Alveus of the hippocampus left


Abbreviation
alv
Color       
Superior regionsHippocampus white matter

SynonymsAbbr.Language
Alveus of the hippocampusalvEng

Output to

NameSideAbbr.WeightDetails
Diagonal band of BrocaipsiDBB-2
Medial septal nucleusipsiMS-2

Input from

NameSideAbbr.WeightDetails
Raphe nucleiipsiRAN-2
Medial septum dorsal band complexipsiMSDB1
Nucleus of the horizontal limb of the diagonal band intermediate partipsiHDBi-0.5
Nucleus of the horizontal limb of the diagonal band rostral partipsiRPHDB-0.5
Nucleus of the vertical limb of the diagonal bandipsiVDB3
Nucleus of the vertical limb of the diagonal band intermediate partipsiVDBi-0.5
Nucleus of the vertical limb of the diagonal band rostral partipsiVDBR-0.5
Medial septal nucleusipsiMS3
Posterior intralaminar thalamic nucleusipsiPIL0.5
Regio superior of the anterodorsal hippocampal formationipsiHIPPsad-2
Regio superior of the anteroventral hippocampal formationipsiHIPPRsav-2
Hilus of the dentate gyrusipsiHil-2
Hilar mossy cellsipsiHilmc-2
Mossy cells in Amarals zone 4ipsiHilagrMc-2
Field CA1 of hippocampusipsiCA1-0.5
Field CA1 of hippocampus layer stratum radiatum non-principal cellsipsiCA1L5srnpc-2
Field CA1 of hippocampus layer stratum pyramidal cellsipsiCA1L3spc-2
Field CA1 of hippocampus temporal poleipsiCA1tp-2
CA1 domain 1 pyramidal layeripsiCA1do1py-0.5
Field CA1 of hippocampus ventral poleipsiCA1vp-2
Field CA1 of hippocampus septal poleipsiCA1sp-2
Field CA2 of hippocampus layer stratum secondary axon of commissural fibers of pyramidale pyramidal cellsipsiCA2L3scfpy-2
Field CA3 of hippocampusipsiCA3-2
Field CA3 of hippocampus layer stratum pyramidale pyramidal neuronsipsiCA3L3spy-2
Field CA3a of hippocampus pyramidal cell layeripsiCA3aLpy-2
Field CA3a of hippocampus pyramidal cell layer secondary axon from commissural fibers of pyramidal cellsipsiCA3aLcfpyc-2
SubiculumipsiS-2
Subiculum layer 5ipsiSuL5-2
Subiculum ventral partipsiSv-2
Regio inferior of the posterior hippocampal formationipsiHIPPipo-2
Subicular cortex of the posterior hippocampal formationipsiHIPPspo-2
Regio inferior of the posterodorsal hippocampal formationipsiHIPPipd-2
Regio superior of the posterodorsal hippocampal formationipsiHIPPspd-2
Regio inferior of the posteroventral part of the hippocampal formationipsiHIPPipv-2
Regio superior of the posteroventral hippocampal formationipsiHIPPspv-2
Subicular cortex of the posteroventral part of the hippocampal formationipsiHIPPsupv-2
PresubiculumipsiPrS-2
ParasubiculumipsiPaS-2
Entorhinal cortex temporal levelipsiEntT0.5
Intermediate entorhinal cortexipsiIEnt2
Lateral entorhinal cortexipsiLEnt-2
Medial entorhinal cortexipsiMEnt3
Medial entorhinal cortex superficial layersipsiMEntLyS-2
Medial entorhinal cortex layer 2ipsiMEntLyL2-0.5
Medial entorhinal cortex layer 3ipsiMEntLyL3-0.5
Septal regionipsiSER3
Medial septum dorsal band complexcontraMSDB1
Septal regioncontraSER-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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