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Rat connectome



Parasubiculum left


Abbreviation
PaS
Color       
Superior regionsSubicular complex

SynonymsAbbr.Language
 PaSpv 
ParasubiculumPAREng
 PAREng
ParasubiculumPaSEng
Brodmann area 49BA49Eng

SubregionsSide
Caudal parasubiculumleft
Medial part of the parasubiculumleft
Outer one third of the parasubiculumleft
Parasubiculum layersleft
Parasubiculum subdivision aleft
Parasubiculum subdivision bleft
Posterodorsal part of the parasubiculumleft
Lateral parasubiculumleft
Parasubiculum dorsal partleft
Parasubiculum distal partleft
Parasubiculum dorsoventral extentleft
Parasubiculum intermediate partleft
Parasubiculum rostral partleft
Parasubiculum temporal partleft
Parasubiculum septal partleft
Parasubiculum proximal partleft
Ventral parasubiculumleft
Transverse extent of the parasubiculumleft

Output to

NameSideAbbr.WeightDetails
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC1
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR0
Lateral hypothalamic area juxtadorsomedial regionipsiJDM0.5
Anterior hypothalamic areaipsiAHA0
Midlateral posterior hypothalamic areaipsiPHAmL-0.5
Ventromedial hypothalamic nucleus shellipsiVMS-0.5
Mammillary bodyipsiCMAM-0.5
Lateral mammillary nucleusipsiLM3
Mammillary body caudal partipsiCMAMc0
Medial mammillary nucleusipsiMMn3
Medial mammillary nucleus lateral partipsiML1
Medial mammillary nucleus medial partipsiMM-0.5
Medial mammillary nucleus median partipsiMMnm0
Premammillary nucleusipsiPMAN-0.5
Supramammillar nucleusipsiSuM2
Anterodorsal thalamic nucleusipsiAD3
Anteromedial thalamic nucleus lateral partipsiAML0
Anteroventral thalamic nucleusipsiAV1
Anteroventral thalamic nucleus dorsal partipsiAVDo0
Anteroventral thalamic nucleus ventrolateral partipsiAVVL2
Anteroventral thalamic nucleus ventral partipsiAVv0
Lateral group of the dorsal thalamusipsiLAT-0.5
Reuniens thalamic nucleusipsiRe3
Laterodorsal thalamic nucleusipsiLD2
Reticular thalamic nucleus dorsomedial partipsiRtdm2
Postcommissural fornixipsifpc3
Posterior basolateral nucleusipsiBLP0
Lateral amygdaloid nucleusipsiLA0
Bed nucleus of the stria terminalisipsiBST2
Amygdalopiriform transition areaipsiAPir1
Posterior amygdaloid nucleusipsiCOAp0
Posteromedial cortical nucleusipsiPMCo0
ClaustrumipsiCl0
Ventromedial accumbensipsiAcbVM0
Dorsal hippocampusipsiHIPPd3
Dentate gyrusipsiDG1
Dentate gyrus molecular layeripsiDGmL3
Middle third of the molecular layer of the dentate gyrusipsiDGmmtL2
Hilus of the dentate gyrusipsiHil1
Ammon hornipsiAmH0
Field CA1 of hippocampusipsiCA11
Field CA1 of hippocampus dorsalipsiCA1d1
Field CA1 of hippocampus ventral partipsiCA1v2
Field CA2 of hippocampusipsiCA21
Field CA3 of hippocampusipsiCA31
SubiculumipsiS1
Subiculum ventral partipsiSv1
Alveus of the hippocampusipsialv-2
Indusium griseumipsiIG0
PresubiculumipsiPrS3
ParasubiculumipsiPaS-0.5
PostsubiculumipsiPost3
Entorhinal cortexipsiEnt3
Entorhinal cortex layer 3ipsiEntL3-0.5
Entorhinal cortex layer 4ipsiEntL4-0.5
Entorhinal cortex layer 1ipsiEntL1-0.5
Entorhinal cortex layer 2ipsiEntL2-0.5
Lateral entorhinal cortexipsiLEnt4
Lateral entorhinal cortex layer 2ipsiLEntL2-0.5
Lateral entorhinal cortex layer 2bipsiLEntL2b-0.5
Lateral entorhinal cortex layer 3ipsiLEntL3-0.5
Lateral entorhinal cortex ventral partipsiVLEA4
Lateral entorhinal cortex ventromedial partipsiVMEAL1
Medial entorhinal cortexipsiMEnt3
Medial entorhinal cortex dorsal partipsiMEntD3
Medial entorhinal cortex layer 1ipsiMEntLyL1-0.5
Medial entorhinal cortex layer 3ipsiMEntLyL31
Medial entorhinal cortex layer 4ipsiMEntLyL4-0.5
Medial entorhinal cortex layer 5ipsiMEntLyL52
Postpiriform transition areaipsiTR1.5
Retrosplenial regionsipsiRS3
Retrosplenial agranular cortexipsiRSA0
Periallocortical areaipsiPeriALLO-0.5
Cingulate cortexipsiCg3
Anterior cingulate cortexipsiACC-3
Cingulate cortex area 1 caudal partipsiCg1c0
Cingulate cortex area 2 caudal partipsiCg2c0
Dorsal anterior cingulate cortexipsiDACC0
Prelimbic cortexipsiPrL1
Infralimbic cortexipsiIL1
Parietal association cortexipsiPtA1
Parietal cortex posterior areaipsiParP0
Parietal cortex posterior area lateral portionipsiParPL-0.5
Temporal cortexipsiTE-0.5
Primary auditory cortexipsiAu10
Perirhinal cortexipsiA353
Ectorhinal cortexipsiA363
Motoric regionsipsiM2
Lateral agranular prefrontal cortexipsiAGl0
Medial agranular prefrontal cortexipsiAGm0
Visual regionsipsiVR-0.5
Primary visual cortexipsiV10
Primary visual cortex binocular areaipsiV1B0
Mediolateral cortical visual areaipsiVISlm0
Anteromedial cortical visual areaipsiVISam0
Lateral orbital cortexipsiLO0
Ventral orbital cortexipsiVO0
Ventrolateral orbital areaipsiVLO0
Accessory olfactory bulbipsiAOB0
Olfactory bulb A16ipsiMOB0
Septofimbrial nucleusipsiSFi1
Lateral mammillary nucleuscontraLM3
Anteroventral thalamic nucleus ventrolateral partcontraAVVL0
Laterodorsal thalamic nucleuscontraLD0
Reticular thalamic nucleus dorsomedial partcontraRtdm0
Bed nucleus of the stria terminaliscontraBST0
PresubiculumcontraPrS3
ParasubiculumcontraPaS-0.5
Entorhinal cortexcontraEnt3
Lateral entorhinal cortexcontraLEnt0
Medial entorhinal cortexcontraMEnt-0.5
Parietal cortex posterior area lateral portioncontraParPL0

Input from

NameSideAbbr.WeightDetails
Locus coeruleusipsiLC-0.5
Raphe nucleiipsiRAN-0.5
Dorsal raphe nucleusipsiDR-0.5
Dorsal raphe nucleus pontine partipsiDRPo-0.5
Median raphe nucleusipsiMnR-0.5
Ventral part of median raphe nucleusipsiMnRV-0.5
Median raphe nucleus medial partipsiMnRm-0.5
Pontine raphe nucleusipsiPnR0.5
Raphe magnus nucleusipsiRMg0.5
Endopiriform systemipsiEnN-0.5
Dorsal endopiriform nucleusipsiDEn1
Ventral endopiriform nucleusipsiVEn2
Nucleus of the horizontal limb of the diagonal bandipsiHDB-0.5
Nucleus of the vertical limb of the diagonal bandipsiVDB-0.5
Nucleus of the vertical limb of the diagonal band rostromedial partipsiVDBrm2
Medial septal nucleusipsiMS-0.5
Medial septal nucleus lateral partipsiMSLa2.5
Medial septal nucleus medial partipsiMSm2.5
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC0
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR0
Lateral hypothalamic area juxtadorsomedial regionipsiJDM0
Anterior hypothalamic areaipsiAHA-0.5
Dorsal hypothalamic areaipsiDA-0.5
Posterior hypothalamic areaipsiPHA-0.5
Supramammillar nucleusipsiSuM1
Supramammillar nucleus lateral partipsiSuML1
Anterior group of the dorsal thalamusipsiATN2.5
Anterodorsal thalamic nucleusipsiAD2
Anteromedial thalamic nucleusipsiAM2
Anteroventral thalamic nucleusipsiAV2
Parafascicular thalamic nucleus medial partipsiPFM1
Rhomboid thalamic nucleusipsiRh-3
Paraventricular thalamic nucleusipsiPV-0.5
Paraventricular thalamic nucleus caudal partipsiPVca1
Paraventricular thalamic nucleus dorsal partipsiPVdo1
Paraventricular thalamic nucleus rostral partipsiPVr1
Paraventricular thalamic nucleus ventral partipsiPVV1
Reuniens thalamic nucleusipsiRe2
Lateral thalamic nuclear groupipsiLTNG-0.5
Caudomedial lateral posterior thalamic nucleusipsiLPcm0
Lateral posterior thalamic nucleus lateral partipsiLPTL0.5
Rostromedial lateral posterior thalamic nucleusipsiLPrm1
Laterodorsal thalamic nucleusipsiLD3
Reticular thalamic nucleusipsiRt2
Subparafascicular thalamic nucleusipsiSPF1
Subparafascicular thalamic nucleus rostral partipsiSPFr1
Basal nucleusipsiBnc3
Accessory basal nucleusipsiAB3
Accessory basal nucleus magnocellular divisionipsiABm1.5
Accessory basal nucleus parvicellular divisionipsiABp1.5
Basal nucleus parvicellular part caudomedial regionipsiBpccm3
Basolateral amygdaloid nucleusipsiBL-0.5
Anterior basolateral nucleusipsiBLA-0.5
Basolateral nucleus caudal poleipsiBLCPo2
Basolateral nucleus ventromedial partipsiBLVMP2
Posterior basolateral nucleusipsiBLP3
Ventral basolateral nucleusipsiBLV-0.5
Basomedial amygdaloid nucleusipsiBM-0.5
Anterior basomedial nucleusipsiBMA0
Posterior basomedial nucleusipsiBMP3
Lateral amygdaloid nucleusipsiLA3
Anterior part of the lateral nucleusipsiLAa-0.5
Lateral nucleus medial partipsiLAM2
Posterior part of the lateral nucleusipsiLAP-0.5
Ventrolateral part of the lateral nucleusipsiLaVL2
Ventromedial part of the lateral nucleusipsiLaVM-0.5
Central amygdaloid nucleusipsiCe1
Amygdalopiriform transition areaipsiAPir1
Anterior cortical amygdaloid nucleusipsiACo0
Posterior amygdaloid nucleusipsiCOAp2
Posterior amygdaloid nucleus medial partipsiCOApm0.5
Posterolateral cortical nucleusipsiPLCo0
Periamygdaloid complexipsiPAC0
Periamygdaloid complex medial divisionipsiPACm0
Periamygdaloid complex sulcal divisionipsiPACs0
Medial amygdaloid nucleusipsiMe2
Medial amygdaloid nucleus anterodorsal partipsiMeAD0.5
Medial amygdaloid nucleus central dorsal partipsiMeCD1
Medial amygdaloid nucleus central ventral partipsiMeCV1
Medial amygdaloid nucleus posteroventral partipsiMePV0.5
Amygdalohippocampal area medial partipsiAHimp1
Posteromedial cortical nucleusipsiPMCo1
ClaustrumipsiCl1.5
Medial accumbensipsiAcbM-0.5
Anterior hippocampal formationipsiAHCf-0.5
Dentate gyrusipsiDG0
Field CA1 of hippocampusipsiCA12
Field CA1 of hippocampus dorsalipsiCA1d2
Field CA1 of hippocampus layer stratum pyramidaleipsiCA1pyr-0.5
Field CA1 of hippocampus temporal poleipsiCA1tp-0.5
Field CA1 of hippocampus ventral partipsiCA1v3
Field CA1 of hippocampus ventral layer stratum pyramidal cellsipsiCA1vL3spc-0.5
Field CA2 of hippocampusipsiCA21
Field CA3 of hippocampusipsiCA31.5
SubiculumipsiS2
Subiculum distal partipsiSdi-0.5
Subiculum dorsal partipsiSd0
Subiculum septal partipsiSse-0.5
Subiculum ventral partipsiSv0
Indusium griseumipsiIG0
PresubiculumipsiPrS3
Presubiculum dorsal partipsiPrD-0.5
Presubiculum layer 3ipsiPrSL3-0.5
Presubiculum layer 4ipsiPrSL4-0.5
Presubiculum layer 5ipsiPrSL5-0.5
ParasubiculumipsiPaS-0.5
PostsubiculumipsiPost2
Entorhinal cortexipsiEnt-0.5
Lateral entorhinal cortexipsiLEnt2.5
Lateral entorhinal cortex layer 1ipsiLEntL10.5
Lateral entorhinal cortex layer 2ipsiLEntL20.5
Lateral entorhinal cortex layer 3ipsiLEntL30.5
Lateral entorhinal cortex layer 4ipsiLEntL4-0.5
Lateral entorhinal cortex layer 5ipsiLEntL50.5
Lateral entorhinal cortex layer 6ipsiLEntL6-0.5
Medial entorhinal cortexipsiMEnt1
Medial entorhinal cortex dorsal partipsiMEntD2.5
Medial entorhinal cortex layer 1ipsiMEntLyL10.5
Medial entorhinal cortex layer 2ipsiMEntLyL20.5
Medial entorhinal cortex layer 3ipsiMEntLyL30.5
Medial entorhinal cortex layer 4ipsiMEntLyL4-0.5
Medial entorhinal cortex layer 5ipsiMEntLyL50.5
Medial entorhinal cortex layer 6ipsiMEntLyL6-0.5
Medial entorhinal cortex deep part of layer 6ipsiMEntLydL63
Piriform cortexipsiPir0
Postpiriform transition areaipsiTR0
Posterior prepiriform cortexipsiPPPC0
Prepiriform cortex lateral partipsiPRPIRL0
Retrosplenial regionsipsiRS-0.5
Retrosplenial dorsalipsiRSd1
Dorsal retrosplenial cortex caudal part layersipsiRSdcL-0.5
Dorsal retrosplenial cortex rostral partipsiRSdR-0.5
Retrosplenial ventral partipsiRSPv1
Retrosplenial ventral aipsiRSv-a3
Ventral retrosplenial cortex caudal partipsiRSPvC-0.5
Ventral retrosplenial rostral partipsiRSPvR-0.5
Retrosplenial area ventral part zone b/cipsiRSPv-bc2
Retrosplenial agranular cortexipsiRSA3
Retrosplenial granular cortex a regionipsiRSGa-0.5
Retrosplenial granular a cortex middle part layer 2ipsiRSGaMiL2-0.5
Retrosplenial granular a cortex middle part layer 3ipsiRSGaMiL3-0.5
Retrosplenial granular a cortex middle part layer 4ipsiRSGaMiL4-0.5
Retrosplenial granular a cortex middle part layer 5ipsiRSGaMiL5-0.5
Retrosplenial granular a cortex middle part layer 6ipsiRSGaMiL6-0.5
Area 29 intermediate rostral partipsiA29ri-0.5
Anterior cingulate cortexipsiACC-3
Dorsal anterior cingulate cortexipsiDACC2
Rostral part of dorsal anterior cingulate cortexipsiDACCR0
Ventral anterior cingulate cortexipsiVACC2
Ventral anterior cingulate cortex layersipsiVACCL2
Rostral part of the ventral anterior cingulate cortexipsiVACCR2
Prelimbic cortexipsiPrL0
Infralimbic cortexipsiIL0
Temporal cortexipsiTE0.5
Auditory regionsipsiAU0
Primary auditory cortexipsiAu10
Ventral auditory areasipsiAUDv0
Agranular insular cortex posterior partipsiAIP1
Agranular insular cortex ventral part layer 3ipsiAIVL31
Agranular insular cortex ventral part layer 5ipsiAIVL51
Agranular insular cortex ventral part layer 6ipsiAIVL61
Visceral dysgranular insular cortexipsiDIv0
Dysgranular insular cortex parietal partipsiDIP0
Granular insular cortexipsiGI0
Granular insular cortex posterior partipsiGIpo0
Parietal granular insular cortexipsiGIPar0.5
Perirhinal cortexipsiA350.5
Ectorhinal cortexipsiA364
Motoric regionsipsiM1.5
Lateral agranular prefrontal cortexipsiAGl0
Medial agranular prefrontal cortexipsiAGm0
Primary somatosensory cortexipsiS10
Secondary somatosensory cortexipsiS20
Primary visual cortexipsiV1-0.5
Secondary visual cortex medial areaipsiV2M-0.5
Secondary visual cortex lateral areaipsiV2L-1
Primary visual cortex binocular areaipsiV1B0
Laterolateral cortical visual areaipsiVISll1.5
Anteromedial cortical visual areaipsiVISam0
Orbitofrontal cortexipsiOrFCx0.5
Lateral orbital cortexipsiLO0
Medial orbital cortexipsiMO2
Ventral orbital cortexipsiVO2
Ventrolateral orbital areaipsiVLO0
Olfactory bulb A16ipsiMOB0
Lateral septal nucleusipsiLS-0.5
Dorsal raphe nucleuscontraDR1
Median raphe nucleuscontraMnR1
Ventral part of median raphe nucleuscontraMnRV1
Anterior group of the dorsal thalamuscontraATN2
Basal nucleus intermediate divisioncontraBnci0.5
Central amygdaloid nucleuscontraCe0
Field CA1 of hippocampus temporal polecontraCA1tp0
PresubiculumcontraPrS3
Presubiculum dorsal partcontraPrD-0.5
Presubiculum layer 3contraPrSL3-0.5
Presubiculum layer 4contraPrSL4-0.5
Presubiculum layer 5contraPrSL5-0.5
ParasubiculumcontraPaS-0.5
Parasubiculum layer 3contraPaSL3-0.5
Entorhinal cortexcontraEnt2
Lateral entorhinal cortexcontraLEnt-0.5
Retrosplenial regionscontraRS2

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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