University of Rostock

Department of Anatomy

Neuroscience Group

  Homepage

 Staff

 neuroVIISAS

 Rat connectome

 Other connectomes

 Neuroimaging

 Neurodegeneration

 Neuroproteomics

 Students

 Links

 Publications

Rat connectome



Agranular insular cortex layer 5 left


Abbreviation
AIL5
Color       
Superior regionsAgranular insular cortex deep layers

SynonymsAbbr.Language
Agranular insular cortex layer 5AIL5 
Layer V of agranular insular cortex  

SubregionsSide
Agranular insular cortex layer 5bleft

Output to

NameSideAbbr.WeightDetails
Tegmental areaipsiTGA0.5
Reticulotegmental nucleusipsiRETn0.5
Pontine nucleiipsiPn1
Parabrachial nucleusipsiPB0.5
Mesencephalic trigeminal nucleus caudal poleipsiMe5cp2
Spinal trigeminal nucleus dorsal partipsiSp5ncD3
Spinal trigeminal nucleus interpolar part dorsal partipsiSp5ID-0.5
Nucleus of the solitary tractipsiSol3
Nucleus of the solitary tract commissural partipsiSolC-0.5
Nucleus of the solitary tract medial partipsiSolM-0.5
Nucleus of the solitary tract medial part mediodorsal zoneipsiSolMmd1
Dorsal motor nucleus of vagus medial partipsi10M1
Dorsal raphe nucleusipsiDR-0.5
Lateral hypothalamic areaipsiLH3
Lateral hypothalamic area posterior partipsiLHAp2
Parafascicular thalamic nucleus rostral partipsiPFr2
Mediodorsal thalamic nucleusipsiMD1
Ventrobasal complex medial partipsiVBM2
Ventromedial thalamic nucleusipsiVM2
Laterodorsal thalamic nucleusipsiLD1
Zona incerta medial partipsiZIm2
Basolateral amygdaloid nucleusipsiBL2
Lateral amygdaloid nucleusipsiLA2
Interstitial nucleus of the posterior limb of the anterior commissureipsiIPAC-0.5
Accumbens nucleusipsiAc2
Caudate putamenipsiCPu3
Infralimbic cortexipsiIL3
Lateral orbital cortexipsiLO-0.5
Pontine nucleicontraPn0.5
Reticular systemcontraRF0.5
Subnucleus reticularis dorsaliscontraSRD1
Mesencephalic trigeminal nucleus caudal polecontraMe5cp1
Spinal trigeminal nucleus dorsal partcontraSp5ncD0.5
Nucleus of the solitary tractcontraSol2
Nucleus of the solitary tract medial part mediodorsal zonecontraSolMmd3
Dorsal motor nucleus of vagus medial partcontra10M3
Dorsal raphe nucleuscontraDR-0.5
Laterodorsal thalamic nucleuscontraLD1
Accumbens nucleuscontraAc1
Caudate putamencontraCPu1
Infralimbic cortexcontraIL1
Lateral orbital cortexcontraLO1

Input from

NameSideAbbr.WeightDetails
Lateral hypothalamic areaipsiLH2
Lateral hypothalamic area posterior partipsiLHAp2
Parafascicular thalamic nucleus rostral partipsiPFr2
Mediodorsal thalamic nucleusipsiMD1
Reuniens thalamic nucleusipsiRe2
Ventrobasal complex medial partipsiVBM2
Ventromedial thalamic nucleusipsiVM2
Zona incerta medial partipsiZIm2
Basolateral amygdaloid nucleusipsiBL3
Lateral amygdaloid nucleusipsiLA2
Infralimbic cortexipsiIL-0.5
Perirhinal cortex midportion layer 4ipsiPRhMiL42
Perirhinal cortex midportion layer 5ipsiPRhMiL52
Perirhinal cortex midportion layer 6ipsiPRhMiL62
Perirhinal cortex rostral part layer 4ipsiPRroL42
Perirhinal cortex rostral part layer 5ipsiPRroL52
Perirhinal cortex rostral part layer 6ipsiPRroL62
Mediolateral thalamic nucleuscontraMeLT3

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





Homepage | Staff | neuroVIISAS | Rat connectome | Other connectomes | Neuroimaging | Neurodegeneration | Students | Links | Publications