University of Rostock

Department of Anatomy

Neuroscience Group

 Homepage

 Staff

 neuroVIISAS

 Rat connectome

 Other connectomes

 Neuroimaging

 Neurodegeneration

 Neuroproteomics

 Students

 Links

 Publications

Rat connectome



Reuniens thalamic nucleus left


Abbreviation
Re
Color       
Superior regionsMidline group of the dorsal thalamus

SynonymsAbbr.Language
Medioventral nucleus  
Nucleus reuniensREEng
Nucleus reuniens of the thalamus  
Medioventral thalamic nucleus  
Nucleus reuniensRELat
Reunions thalamic nucleus Eng
Nucleus reuniens of thalamus  
Reuniens nucleus Eng
Reuniens thalamic nucleusReEng

SubregionsSide
Nucleus reuniens caudal divisionleft
Nucleus reuniens median partleft
Nucleus reuniens rostral divisionleft
Reuniens thalamic nucleus anterior partleft
Reuniens thalamic nucleus dorsal partleft
Reuniens thalamic nucleus lateral partleft
Reuniens thalamic nucleus laterodorsal partleft
Reuniens thalamic nucleus medial partleft
Reuniens thalamic nucleus posterior partleft
Reuniens thalamic nucleus ventral partleft
Reuniens thalamic nucleus dorsomedial partleft
Reuniens thalamic nucleus rostroventral partleft
Reuniens thalamic nucleus rostrocaudal extentleft
Reuniens thalamic nucleus rostrocaudal levelsleft
Reuniens thalamic nucleus rostral partleft
Reuniens thalamic nucleus ventrolateral zoneleft
Reuniens thalamic nucleus anteroventral partleft
Reuniens thalamic nucleus central partleft
Reuniens thalamic nucleus ventromedial partleft
Reuniens thalamic nucleus dorsocaudal partleft

Output to

NameSideAbbr.WeightDetails
Central gray medial partipsiCGMe-0.5
Central grey caudal area ventral partipsicCGv2
Central gray mesencephalic partipsiCGM1
Periaqueductal grayipsiPAG1
Superior colliculusipsiSC-0.5
Substantia nigra compact partipsiSNC-0.5
Ventral tegmental area A10ipsiVTA1
Ventral tegmental nucleusipsiVTg0
PonsipsiP-3
A5 noradrenaline cellsipsiA53
Parabrachial nucleusipsiPB1
Medulla oblongataipsiMeOb-3
Inferior salivatory nucleusipsiIS1
Superior salivatory nucleusipsiSuS4
Median eminenceipsiME-0.5
Endopiriform systemipsiEnN2
Ventral endopiriform nucleusipsiVEn1
Nucleus of the horizontal limb of the diagonal bandipsiHDB1
Nucleus of the vertical limb of the diagonal bandipsiVDB2
Medial septal nucleusipsiMS3
Basal nucleus Meynert medial partipsiBmp2
Substantia innominataipsiSI2
Substantia innominata dorsal partipsiSID-0.5
Substantia innominata ventral partipsiSIV1
Substantia innominata caudoventral partipsiSICV-0.5
Preoptic regionipsiPREO1
Lateral preoptic areaipsiLPO2
Medial preoptic areaipsiMPA1
Magnocellular preoptic nucleusipsiMCPO1
Medial preoptic nucleusipsiMPO0
Median preoptic nucleusipsiMnPO3
Ventrolateral preoptic nucleusipsiVLPO3
Ventromedial preoptic nucleusipsiVMPO-0.5
Dorsal tenia tectaipsiDTT3
Ventral tenia tectaipsiVTT1
HypothalamusipsiHYPO-0.5
Lateral zoneipsiLHA1
Lateral hypothalamic areaipsiLH3
Lateral hypothalamic area caudal partipsiLHc2
Lateroanterior hypothalamic nucleusipsiLAH-0.5
Anterior hypothalamic nucleus rostral zoneipsiAHnR1
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM2
Posterior hypothalamic areaipsiPHA2
Posterior hypothalamic nucleusipsiPH1
Ventromedial hypothalamic nucleusipsiVMH2
Arcuate nucleusipsiArc1
Nucleus paraventricularis [Periventricular zone anterior region]ipsiPaPAR2
Paraventricular hypothalamic nucleus medial parvocellular partipsiMPPa-0.5
Paraventricular hypothalamic nucleus posterior part [Periventricular zone anterior region]ipsiPaPo3
Paraventricular hypothalamic nucleusipsiPa2
Mid paraventricular hypothalamic nucleusipsiMiPa2
Mid paraventricular hypothalamic nucleus parvocellular divisionipsiMiPaPar2
Paraventricular nucleus anterior partipsiPaan1
Paraventricular nucleus medial partipsiPame-0.5
Suprachiasmatic nucleusipsiSCh-0.5
Supraoptic nucleus [Supraoptic region]ipsiSO0
Mammillary bodyipsiCMAM1
Premammillary nucleusipsiPMAN-0.5
Supramammillar nucleusipsiSuM1
Anteromedial thalamic nucleusipsiAM1
Anteroventral thalamic nucleusipsiAV2
Interoanteromedial thalamic nucleusipsiIAM1
Central medial thalamic nucleusipsiCM2
Parafascicular thalamic nucleusipsiPF2
Rhomboid thalamic nucleusipsiRh1
Mediodorsal thalamic nucleusipsiMD1
Intermediodorsal thalamic nucleusipsiIMD1
Mediodorsal thalamic nucleus central partipsiMDC1
Mediodorsal thalamic nucleus medial partipsiMDM1
Submedius thalamic nucleusipsiSub2
Paratenial thalamic nucleusipsiPT1
Paraventricular thalamic nucleusipsiPV2
Paraventricular thalamic nucleus anterior partipsiPVA1
Paraventricular thalamic nucleus posterior partipsiPVP1
Reuniens thalamic nucleusipsiRe1
Subfornical organipsiSFO-0.5
Ventrolateral thalamic nucleusipsiVL2.5
Ventral posterior thalamic complexipsiVPT2
Ventromedial thalamic nucleusipsiVM2
Laterodorsal thalamic nucleusipsiLD2
Reticular thalamic nucleusipsiRt3
Reticular thalamic nucleus medial partipsiRtm3
Zona incertaipsiZI3
Tuber cinereum areaipsiTC1
Lateral habenular nucleusipsiLHb1
Medial pretectal nucleusipsiMPT-0.5
Pineal glandipsiPi1
Superficial pineal glandipsiSPi1
Cingulate bundleipsicgb-1
Medial forebrain bundle at the level of the anterior commissureipsimfbac0
Medial forebrain bundle at the level of the lateral preoptic areraipsimfbLpa0
Medial forebrain bundle at the level of the anterior hypothalamic nucleusipsimfbahn0
Medial forebrain bundle at the level of the lateral hypothalamusipsimfbLH-2
Medial forebrain bundle at the level of the posterior hypothalamic nucleusipsimfbPH0
Amygdaloid complexipsiAC-0.5
Basal nucleusipsiBnc2
Basal dorsal nucleusipsiBnD3
Basal nucleus anterior subdivisionipsiBncA3
Basolateral amygdaloid nucleusipsiBL2
Basomedial amygdaloid nucleusipsiBM2
Posterior basomedial nucleusipsiBMP-0.5
Lateral amygdaloid nucleusipsiLA2
Bed nucleus of the stria terminalisipsiBST2
Bed nucleus of the stria terminalis caudal part caudoventral regionipsiBSTCacv1
Bed nucleus of the stria terminalis caudal part perifornical regionipsiBSTCapf1
Bed nucleus of the stria terminalis intraamygdaloid divisionipsiBSTIA-0.5
Bed nucleus of the stria terminalis lateral divisionipsiBSTL2
Bed nucleus of the stria terminalis lateral division ventral partipsiBSTLV-0.5
Bed nucleus of the stria terminalis medial divisionipsiBSTM2
Bed nucleus of the stria terminalis posterior divisionipsiBSTP2
Central amygdaloid nucleusipsiCe2
Central amygdaloid nucleus medial divisionipsiCeM3
Central amygdaloid nucleus ventral partipsiCeV-0.5
Amygdalopiriform transition areaipsiAPir3
Anterior cortical amygdaloid nucleusipsiACo2
Periamygdaloid complexipsiPAC1
Medial amygdaloid nucleusipsiMe3
ClaustrumipsiCl3
Anterior part of the claustrumipsiACl1
Dorsal part of claustrumipsiDCl-0.5
Rostral part of claustrumipsiRCl1.5
Globus pallidusipsiGP3
Peripallidal regionipsiPePa2
Subpallidal regionipsiSuPa1
Ventral pallidumipsiVP1
StriatumipsiSTR-0.5
Accumbens nucleusipsiAc2
Accumbens nucleus anterolateral partipsiAcAL3
Accumbens nucleus anteromedial partipsiAcAM2
Accumbens nucleus coreipsiAcbC2
Lateral coreipsiAcbCl2
Accumbens nucleus posterolateral partipsiAcbpl1
Accumbens nucleus shellipsiAcbSh1
Lateral accumbens shellipsiAcbShl2
Lateral nucleus accumbensipsiAcl1
Medial accumbensipsiAcbM0.5
Posteromedial accumbensipsiAcbPM0
Caudate putamenipsiCPu3
Medial striatumipsiCPum0.5
Dorsal striatumipsiCPud-0.5
Ventral striatumipsiCPuv1
Ventrolateral striatumipsiCPuvl2
Ventromedial striatumipsiCPuvm2
HippocampusipsiHIPP3
Intermediate zone of the indusium griseum anterior hippocampal continuationipsiAHCCigim-0.5
Deep pyramidal zone of the indusium griseum anterior hippocampal continuationipsiAHCCigdp-0.5
Dorsal hippocampusipsiHIPPd2.5
Dentate gyrusipsiDG-0.5
Dorsal hippocampus dentate gyrusipsiDDG-0.5
Ammon hornipsiAmH-0.5
Field CA1 of hippocampusipsiCA13
Field CA1 of hippocampus dorsalipsiCA1d3
Field CA1 of hippocampus stratum lacunosum-moleculareipsiCA1LM3
Field CA1 of hippocampus layer stratum lacunosumipsiCA1L6sla3
Field CA1 of hippocampus layer stratum moleculareipsiCA1L7sm3
Field CA1 of hippocampus layers deep layersipsiCA1LD2
Field CA1 of hippocampus ventral partipsiCA1v3
Portion of CA1 located adjacent to the ventral subiculumipsiCA1sv2
Field CA1 of hippocampus intermediate partipsiCA1im2
Field CA2 of hippocampus layer stratum moleculareipsiCA2L7sm1
Field CA2 of hippocampus layer stratum lacunosumipsiCA2L6sla1
Field CA3 of hippocampusipsiCA30
SubiculumipsiS3
Intermediate subiculum stratum moleculareipsiInSuSmo2
Subiculum caudal part molecular layeripsiScapmL3
Subiculum dorsal partipsiSd3
Subiculum dorsal part molecular layeripsiSdapmL-0.5
Molecular layer of the subiculumipsiSumo2
Subiculum ventral partipsiSv3
Subiculum ventral part caudal subdivisionipsiSvc0.5
Ventral subiculum rostral partipsiSvR1
Subiculum ventral part molecular layeripsiSvML2
Posterior hippocampusipsiHIPPpo-0.5
Ventral hippocampusipsiHIPPv3
Hippocampus rostral partipsiHIPPRo0
Indusium griseum deep pyramidal layeripsiIGL5b-0.5
PresubiculumipsiPrS3
Presubiculum layer 1ipsiPrSL1-0.5
ParasubiculumipsiPaS2
Parasubiculum layer 1ipsiPaSL1-0.5
Ventral parasubiculumipsiPaSV3
PostsubiculumipsiPost-0.5
Entorhinal cortexipsiEnt2
Entorhinal cortex layer 5ipsiEntL53
Entorhinal cortex layer 6ipsiEntL6-0.5
Entorhinal cortex layer 3ipsiEntL33
Entorhinal cortex layer 4ipsiEntL43
Entorhinal cortex layer 1ipsiEntL13
Dorsolateral entorhinal cortex layer 3ipsiDLEntL33
Dorsolateral entorhinal cortex layer 4ipsiDLEntL42
Dorsolateral entorhinal cortex layer 1ipsiDLEntL13
Dorsolateral entorhinal cortex layer 2ipsiDLEntL2-0.5
Dorsolateral entorhinal cortex layer 6ipsiDLEntL63
Lateral entorhinal cortexipsiLEnt3
Lateral entorhinal cortex central partipsiLEntce2
Lateral entorhinal cortex dorsal partipsiLEntd2
Lateral entorhinal cortex dorsal part layer 1ipsiLEntdL1-0.5
Lateral entorhinal cortex dorsal part layer 3ipsiLEntdL3-0.5
Lateral entorhinal cortex dorsal part layer 4ipsiLEntdL4-0.5
Lateral entorhinal cortex layer 1ipsiLEntL13
Lateral entorhinal cortex layer 2ipsiLEntL22
Lateral entorhinal cortex layer 3ipsiLEntL32
Lateral entorhinal cortex deep layersipsiLEntDL1
Lateral entorhinal cortex ventral partipsiVLEA4
Lateral entorhinal cortex ventral part layer 1ipsiVLEAL11
Lateral entorhinal cortex ventral part layer 3ipsiVLEAL31
Lateral entorhinal cortex ventral part layer 4ipsiVLEAL41
Lateral entorhinal cortex ventromedial partipsiVMEAL3
Medial entorhinal cortexipsiMEnt3
Medial entorhinal cortex layer 1ipsiMEntLyL13
Medial entorhinal cortex layer 2ipsiMEntLyL22
Medial entorhinal cortex layer 3ipsiMEntLyL33
Medial entorhinal cortex layer 4ipsiMEntLyL43
Medial entorhinal cortex deep layersipsiMEntDLy1
Medial entorhinal cortex layer 5ipsiMEntLyL52
Medial entorhinal cortex layer 6ipsiMEntLyL62
Ventrolateral entorhinal cortexipsiVLENT0
Piriform cortexipsiPir2
Anterior piriform cortexipsiAPIRC3
Anterior piriform cortex medial partipsiAPIRCMP0
Dorsolateral piriform cortexipsiDLPir2
Medial part of the piriform cortexipsiMPir1
Piriform cortex layer 1ipsiPirL12
Piriform cortex layer 2ipsiPirL21.5
Piriform cortex layer 3ipsiPirL31.5
Posterior piriform cortexipsiPPIRC1
Prepiriform cortexipsiPRPIR1
Retrosplenial regionsipsiRS3
Retrosplenial dorsalipsiRSd2
Retrosplenial ventral partipsiRSPv2
Rostral retrosplenial cortexipsiRRS-0.5
Retrosplenial cortex middle part layer 1ipsiRSmiL1-0.5
Retrosplenial cortex middle part layer 2ipsiRSmiL2-0.5
Retrosplenial cortex middle part layer 3ipsiRSmiL3-0.5
Retrosplenial cortex middle part layer 4ipsiRSmiL4-0.5
Retrosplenial cortex middle part layer 5ipsiRSmiL5-0.5
Retrosplenial cortex middle part layer 6ipsiRSmiL6-0.5
Retrosplenial cortexipsiRSCx1
Retrosplenial dysgranular cortexipsiRSdys-0.5
Midrostrocaudal part of the retrosplenial dysgranular cortexipsiRSdysmrc1
Retrosplenial granular cortexipsiRSGra-0.5
Retrosplenial granular cortex a regionipsiRSGa-0.5
Area 29ipsiA293
Retrosplenial granular cortex layer 1ipsiRSGL1-0.5
Cingulate cortexipsiCg3
Anterior cingulate cortexipsiACC3
Cingulate cortex area 1 caudal partipsiCg1c2
Cingulate cortex area 1 layer 1ipsiCg1L11
Cingulate cortex area 2ipsiCg23
Cingulate cortex area 2 caudal partipsiCg2c2
Cingulate cortex area 3ipsiCg33
Cingulate cortex area 3 layer 1ipsiCg3L11
Dorsal anterior cingulate cortexipsiDACC0.5
Cingulate cortex layer 1ipsiCgL1-0.5
Cingulate cortex layer 3ipsiCgL3-0.5
Cingulate cortex layer 4ipsiCgL4-0.5
Cingulumipsicg-0.5
Posterior cingulate cortexipsiPCC-0.5
Prelimbic cortexipsiPrL2
Prelimbic cortex layer 1ipsiPrLL12
Prelimbic cortex layer 1aipsiPrLL1a2
Prelimbic cortex layer 5ipsiPrLL52
Prelimbic cortex layer 6ipsiPrLL62
Infralimbic cortexipsiIL3
Infralimbic cortex layer 1ipsiILL12
Infralimbic cortex layer 1aipsiILL1a2
Infralimbic cortex layer 5ipsiILL52
Infralimbic cortex layer 6ipsiILL62
Infralimbic cortex layer 3ipsiILL3-0.5
Infralimbic cortex layer 4ipsiILL4-0.5
Infralimbic cortex rostral partipsiILR1.5
Infralimbic cortex anterior part layer 5ipsiILAnL53
Infralimbic cortex anterior part layer 6ipsiILAnL63
Frontal association cortexipsiFrA1
Frontal association cortex layer 1ipsiFrALL1-0.5
Frontal association cortex layer 3ipsiFrALL3-0.5
Frontal association cortex layer 4ipsiFrALL4-0.5
Frontal cortex area 2ipsiFr2-0.5
Frontal cortex area 2 caudal partipsiFr2C1
Frontal cortex area 2 rostral partipsiFr2R1
Frontal cortex area 2 layer 1ipsiFr2L12
Parietal association cortexipsiPtA1
Parietal cortex posterior area caudal part of the lateral portionipsiParPcL-0.5
Parietal cortex posterior area medial portionipsimPPC1
Parietal cortex posterior area rostrocaudal extent of the medial portionipsimrcPPC1
Parietal association cortex layer 1ipsiParPLa11
Temporal cortexipsiTE1
Temporal association area 2ipsiTe2-0.5
Temporal cortex layer 1ipsiTELaL11
Dorsal transition zoneipsiDTr-0.5
Frontal polar cortex lateral partipsiFPl1
Frontal polar cortex medial partipsiFPm3
Insular cortexipsiICX3
Agranular insular cortexipsiAI2
Caudal half of agranular insular area in the fundus and dorsal lip of rhinal sulcusipsiAIChF2
Agranular insular cortex dorsal partipsiAID2
Agranular insular cortex dorsal part superficial layersipsiAIDsL-0.5
Agranular insular cortex layer 5ipsiAIL52
Agranular insular cortex layer 1ipsiAIL12
Agranular insular cortex layer 3ipsiAIL32
Agranular insular cortex rostral partipsiRAIC2
Agranular insular cortex posterior partipsiAIP1
Caudal half of posterior agranular insular area in the ventral lip of rhinal sulcusipsiAIPchvL3
Most rostral part of the posterior agranular insular cortexipsiAIPpmr3
Agranular insular cortex ventral partipsiAIV2
Dysgranular insular cortexipsiDI1
Granular insular cortexipsiGI1
Granular insular cortex caudal partipsiGIC2
Perirhinal cortexipsiA353
Perirhinal cortex layer 1ipsiA35L13
Ectorhinal cortexipsiA362
Dorsal peduncular cortex layer 1ipsiDPL12
Prefrontal cortexipsiPFC2
Prefrontal cortex dorsomedial partipsiPFCdm2
Motoric regionsipsiM-0.5
Lateral agranular prefrontal cortexipsiAGl2
Lateral agranular prefrontal cortex layer 1ipsiAGlL1-0.5
Medial prefrontal cortexipsimPFC3
Medial prefrontal cortex ventral partipsimPFCV3
Medial prefrontal cortex ventral part layer 1ipsimPFCVL1-0.5
Medial prefrontal cortex ventral part layer 5ipsimPFCVL5-0.5
Medial prefrontal cortex ventral part layer 6ipsimPFCVL6-0.5
Medial agranular prefrontal cortexipsiAGm1.5
Medial agranular prefrontal cortex layer 1ipsiAGmL1-0.5
Primary somatosensory cortexipsiS11
Primary somatosensory cortex barrel fieldipsiS1BF2
Secondary somatosensory cortexipsiS22
Visual regionsipsiVR-0.5
Primary visual cortexipsiV11
Primary visual cortex layer 1ipsiV1L13
Secondary visual cortexipsiV2-0.5
Secondary visual cortex medial areaipsiV2M-0.5
Anterior medial frontal cortexipsiAMFC3
Orbital cortexipsiOrC-0.5
Lateral orbital cortexipsiLO2
Medial orbital cortexipsiMO2
Medial orbital cortex dorsal part layer 1aipsiMOL1a2
Medial orbital cortex dorsal part layer 3ipsiMOL32
Medial orbital cortex dorsal part layer 5ipsiMOL52
Medial orbital cortex layer 1ipsiMOcxL1-0.5
Medial orbital cortex layer 3ipsiMOcxL3-0.5
Medial orbital cortex layer 4ipsiMOcxL4-0.5
Ventral orbital cortexipsiVO3
Ventrolateral orbital areaipsiVLO1
Ventrolateral orbital area layer 3ipsiVLOL3-0.5
Ventrolateral orbital area layer 4ipsiVLOL4-0.5
Ventrolateral orbital area layer 1ipsiVLOL1-0.5
Ventrolateral orbital area posterior partipsiVLOp3
Anterior olfactory nucleusipsiAON-1
Anterior olfactory nucleus medial partipsiAONm1
Anterior olfactory nucleus ventral partipsiAONv1
Olfactory tubercleipsiTuO1
Olfactory tubercle lateral partipsiTuOL0.5
Septal regionipsiSER1
Lateral septal nucleusipsiLS-0.5
Lateral septal nucleus intermediate partipsiLSI1
Lateral septal nucleus rostral partipsiLSr1
Lateral septal nucleus ventral partipsiLSV1
Spinal cordipsiMES0
Cervical segment 7ipsiCS7-1
Intermediolateral cell column T1ipsiIMLT11
Intermediolateral cell column T2ipsiIMLT21
Intermediolateral cell column T3ipsiIMLT31
Intermediolateral cell column T4ipsiIMLT41
Ventral tegmental nucleuscontraVTg0
A5 noradrenaline cellscontraA52
Inferior salivatory nucleuscontraIS1
Superior salivatory nucleuscontraSuS2
Ventrolateral preoptic nucleuscontraVLPO-0.5
Lateral zonecontraLHA-0.5
Paraventricular hypothalamic nucleuscontraPa0
Submedius thalamic nucleus dorsal partcontraSubD2
Reticular thalamic nucleuscontraRt1
Amygdaloid complexcontraAC-0.5
Bed nucleus of the stria terminalis caudal part caudoventral regioncontraBSTCacv-0.5
Bed nucleus of the stria terminalis caudal part perifornical regioncontraBSTCapf-0.5
Bed nucleus of the stria terminalis lateral divisioncontraBSTL-0.5
Bed nucleus of the stria terminalis medial divisioncontraBSTM-0.5
Ventrolateral striatumcontraCPuvl1
Ventromedial striatumcontraCPuvm0
HippocampuscontraHIPP1
Dorsal hippocampuscontraHIPPd-0.5
Field CA1 of hippocampuscontraCA11
SubiculumcontraS1
Subiculum ventral partcontraSv-0.5
Posterior hippocampuscontraHIPPpo1
Ventral hippocampuscontraHIPPv-0.5
Entorhinal cortexcontraEnt0
Anterior cingulate cortexcontraACC2
Prelimbic cortexcontraPrL2
Infralimbic cortexcontraIL2
Frontal cortex area 1contraFr12
Frontal cortex area 2contraFr2-0.5
Frontal cortex area 2 anterior partcontraFr2a2
Insular cortexcontraICX1
Agranular insular cortex rostral partcontraRAIC1
Lateral agranular prefrontal cortexcontraAGl0.5
Medial prefrontal cortexcontramPFC2
Medial agranular prefrontal cortexcontraAGm2
Primary visual cortexcontraV1-0.5
Medial orbital cortexcontraMO2
Ventral orbital cortexcontraVO2
Ventrolateral orbital areacontraVLO2
Septal regioncontraSER0
Cervical segment 7contraCS7-1
Lumbar epaxial musclesipsiMuscLep-0.5

Input from

NameSideAbbr.WeightDetails
Central grayipsiCG3
Central gray mesencephalic partipsiCGM-0.5
Paralemniscal nucleusipsiPL1
Nucleus of DarkschewitschipsiDk3
Periaqueductal grayipsiPAG-0.5
Aqueductal part of periaqueductal grayipsiAPAG1
Dorsolateral periaqueductal grayipsiDLPAG3
Dorsolateral periaqueductal gray caudal partipsiPAGdlc1
Dorsolateral periaqueductal gray rostral partipsiPAGdlr1
Dorsomedial periaqueductal grayipsiDMPAG1
Lateral periaqueductal grayipsiLPAG2
Periaqueductal gray dorsal partipsiPAGd1
Periaqueductal gray caudal dorsolateral partipsiPAGLDC1
Periaqueductal gray rostrolateral partipsiPAGRL3
Periaqueductal gray rostrocaudal extentipsiPAGroe1
Ventral periaqueductal grayipsiVPAG2
Ventrolateral periaqueductal grayipsiVLPAG2
Ventrolateral periaqueductal gray caudal partipsiPAGvlc1
Ventral peripeduncular periaqueductal grayipsiVPPAG-0.5
Periventricular gray matteripsiPVG1
Superior colliculusipsiSC-0.5
Superior colliculus lateral partipsiSCL3
Superior colliculus intermediate layersipsiSCi1
Superior colliculus deep layersipsiSCd1
Superior colliculus medial partipsimSC1
Tegmental areaipsiTGA1
Central tegmental fieldipsiTGAC1
Peduncularpontine nucleusipsiPPN-0.5
Subpeduncular tegmental nucleusipsiSPTg2
Substantia nigra compact partipsiSNC1
Substantia nigra reticular partipsiSNR1
Substantia nigra reticular part medial tieripsiSNRm0.5
Ventral tegmental area A10ipsiVTA3
Parabrachial pigmented nucleusipsiPBP3
Caudal linear nucleus of the rapheipsiCLi0
Laterodorsal tegmental nucleusipsiLDTg3
Dorsal tegmental nucleusipsiDTg3
Dorsal tegmental nucleus lateral partipsiDLTN2
Pedunculopontine tegmental nucleusipsiPPTg3
Around periaqueductal grayipsiArPAG1
Edinger Westphal nucleusipsiEW2.5
Interstitial nucleus of CajalipsiInC2
A5 noradrenaline cellsipsiA51
Barringtons nucleusipsiBar1
Locus coeruleusipsiLC4
Nucleus incertusipsiNI0
Nucleus incertus pars compactaipsiNIc3
Nucleus incertus pars dissipataipsiNId3
Dorsomedial tegmental areaipsiDMTg2
Prepositus nucleusipsiPr0
Reticular systemipsiRF0.5
Intermediate reticular nucleusipsiIRt1
Mesencephalic reticular formationipsiMRF3
Deep mesencephalic nucleusipsiDpMe3
Pontine reticular nucleusipsiPRN-0.5
Pontine reticular nucleus oral partipsiPnO3
Pontine reticular nucleus ventral partipsiPnV0
Pontine reticular nucleus caudal partipsiPNC2
Peribrachial regionipsiPBR1
Cuneiforme nucleusipsiCnF2
Parabrachial nucleusipsiPB3
Lateral parabrachial nucleusipsiLPB-0.5
Parabrachial nucleus external divison lateral partipsiPBeDL2
Parabrachial nucleus medialipsiPBnMe1
Medial parabrachial nucleus external partipsiMPBE-0.5
Parabrachial nucleus ventrolateral partipsiPBveLa4
Rostrolateral parabrachial nucleusipsiPBRoL-0.5
Gigantocellular reticular nucleusipsiGi2
Gigantocellular reticular nucleus alpha partipsiGiA0
Lateral reticular nucleusipsiLRt2
Medullary reticular nucleusipsiMdD-0.5
Subnucleus reticularis dorsalisipsiSRD2
Medullary reticular nucleus dorsal partipsiMdDd1
Medullary reticular nucleus ventral partipsiMdV0
Parvicellular reticular nucleusipsiPCRt1
Subcoeruleus nucleusipsiSubC1
MyelencephalonipsiMYC-0.5
Mesencephalic trigeminal nucleusipsiMe53
Principal sensory trigeminal nucleusipsiPr50
Spinal trigeminal nucleus caudal partipsiSp5C1
Spinal trigeminal nucleus interpolar partipsiSp5I0
Spinal trigeminal nucleus interpolar part caudalipsiSp5Ic-0.5
Spinal trigeminal nucleus oral partipsiSp5O0
Vestibular nucleiipsiVnc0
Nucleus of the solitary tractipsiSol2
Parasolitary nucleusipsiPSol2
Dorsal motor nucleus of vagusipsi102
Raphe nucleiipsiRAN-0.5
Dorsal raphe nucleusipsiDR2
Dorsal raphe nucleus caudal partipsiDRC3
Dorsal raphe nucleus dorsal partipsiDRD3
Dorsal raphe nucleus rostral partipsiDRr3
Dorsal raphe nucleus ventral partipsiDRV3
Dorsal raphe nucleus ventrolateral partipsiDRVL3
Rostral linear nucleus of the rapheipsiRLi0
Median raphe nucleusipsiMnR3
Central raphe nucleusipsiCRN-0.5
Superior central raphe nucleusipsiCS1
Paramedian raphe nucleusipsiPMnR0
Pontine raphe nucleusipsiPnR1
Raphe interpositus nucleusipsiRIP0
Raphe magnus nucleusipsiRMg2
Raphe obscurus nucleusipsiROb1
Raphe pallidus nucleusipsiRPa0
Rostral ventrolateral medullaipsiRVLM1
A1 noradrenergic cellsipsiA1-0.5
Cuneate nucleusipsiCu1
Gracile nucleus principal partipsiGr1
Inferior oliveipsiIO1
Paragigantocellular reticular nucleusipsiPGi2
Dorsal paragigantocellular nucleusipsiDPGi1
Lateral paragigantocellular nucleusipsiLPGi0
Caudal brainstemipsiMYCC1
Basal forebrainipsiBAF-0.5
Diagonal band of BrocaipsiDBB1
Nucleus of the horizontal limb of the diagonal bandipsiHDB2
Nucleus of the vertical limb of the diagonal bandipsiVDB2
Medial septal nucleusipsiMS2
Substantia innominataipsiSI1
Substantia innominata dorsal partipsiSID1
Intermediate hypothalamic cell groupsipsiIHCG2
Lateral preoptic areaipsiLPO1
Medial preoptic areaipsiMPA3
Medial preoptic area dorsolateral partipsiMPADL2
Magnocellular preoptic nucleus lateral partipsiMCPOL-0.5
Magnocellular preoptic nucleus medial partipsiMCPOm-0.5
Medial preoptic nucleusipsiMPO2
Median preoptic nucleusipsiMnPO1
Dorsal tenia tectaipsiDTT1
Ventral tenia tectaipsiVTT1
HypothalamusipsiHYPO-0.5
Dorsomedial hypothalamic nucleusipsiDMHy2
Lateral hypothalamic area anterior part [Preoptic anterior region]ipsiLHAapar2
Lateral hypothalamic area posterior part [Preoptic anterior region]ipsiLHApPAR2
Lateral hypothalamic area premammillary subfornical region [Preoptic anterior region]ipsiLHAsfp0
Lateral zoneipsiLHA4
Lateral hypothalamic areaipsiLH3
Dorsolateral hypothalamusipsiDLH-0.5
Lateral hypothalamic area motor related juxtaventromedial regionipsiLHAjvm1.5
Lateral hypothalamic area subfornical region anterior zoneipsiLHAsfa2
Lateral hypothalamic area perifornical partipsiPFx3
Lateral hypothalamic area ventral partipsiLHAvp-0.5
Tuberal division of the lateral hypothalamic areaipsiLHTC-0.5
Tuberal nucleusipsiTU2
Medial zoneipsiMHA-0.5
Anterior hypothalamic areaipsiAHA3
Anterior hypothalamic area central partipsiAHAC3
Anterior hypothalamic area posterior partipsiAHAP0.5
Anterior hypothalamic nucleus ventromedial partipsiAHAvm2
Anterior hypothalamic area immediately caudal to the suprachiasmatic areaipsiAHAcSCh0.5
Anterior hypothalamic nucleusipsiAHn-0.5
Anterior part of the anterior hypothalamic nucleusipsiAHna1
Dorsal hypothalamic areaipsiDA2
Dorsomedial hypothalamic areaipsiDMHyA1
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM3
Dorsomedial hypothalamic nucleus anterior partipsiDMA0.5
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM3
Dorsomedial hypothalamic nucleus ventral partipsiDMV0.5
Dorsomedial nucleus posterior partipsiDMHp0.5
Posterior hypothalamic areaipsiPHA3
Midlateral posterior hypothalamic areaipsiPHAmL-0.5
Posterior hypothalamic nucleusipsiPH3
Posterior hypothalamic nucleus caudal partipsiPHCa3
Posterior hypothalamic nucleus rostral partipsiPHRo3
Subparaventricular zoneipsiSuPZ1
Lateral part of ventral subparaventricular zoneipsiSuPZvL2
Subparaventricular zone ventromedial partipsiSuPZvm2.5
Subparaventricular zone dorsomedial partipsiSuPZdm1
Subparaventricular zone dorsolateral partipsiSuPZdL1
Ventromedial hypothalamic nucleusipsiVMH3
Ventromedial hypothalamic nucleus anterior partipsiVMHA1
Ventromedial hypothalamic nucleus central partipsiVMHC1
Ventromedial hypothalamic nucleus dorsomedial partipsiVMHDM2
Ventromedial hypothalamic nucleus ventrolateral partipsiVMHVL0.5
Ventromedial hypothalamic nucleus ventromedial partipsiVMHvm2
Arcuate nucleusipsiArc1
Paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region]ipsiPaMP-0.5
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsiPaAP-0.5
Ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsivPaAP-0.5
Adjacent to the ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsiPaAPav-0.5
Paraventricular hypothalamic nucleusipsiPa2
Anterior part of periventricular parvocellular subdivision of paraventricular hypothalamic nucleusipsiPVPapvA-0.5
Paraventricular nucleus anterior partipsiPaan0.5
Paraventricular nucleus dorsal partipsiPaDo-0.5
Periventricular hypothalamic nucleusipsiPe0.5
Preoptic periventricular nucleusipsiPePO0.5
Subparaventricular zone of the hypothalamus dorsal regionipsiSPd1
Subparaventricular zone of the hypothalamus perisuprachiasmatic regionipsiSBPVps2
Suprachiasmatic nucleusipsiSCh3
Suprachiasmatic nucleus dorsal divisionipsiSChd0.5
Suprachiasmatic nucleus dorsomedial partipsiSCnDM2
Suprachiasmatic nucleus ventrolateral partipsiSCnVL2
Region dorsal to suprachiasmatic nucleusipsiSChDT0.5
Suprachiasmatic preoptic nucleusipsiPSCh0.5
Medial hypothalamic groupipsiMHYPOg1
Incerto hypothalamic areaipsiicHYPO3
Incerto hypothalamic area mediocaudal partipsiicHYPOmc-0.5
Lateral mammillary nucleusipsiLM-0.5
Medial mammillary nucleusipsiMMn-0.5
Premammillary nucleusipsiPMAN0.5
Premammillary nucleus dorsal partipsiPMD3
Premammillary nucleus ventral partipsiPMV3
Supramammillar nucleusipsiSuM3
Supramammillar nucleus lateral part lateral subpartipsiSuMLL3
Supramammillar nucleus lateral part medial subpartipsiSuMLM3
Supramammillar nucleus medial partipsiSuMM3
A8 dopamine cells retrorubral groupipsiRRF1
Perifornical nucleusipsiPeF-0.5
Retrochiasmatic areaipsiRCh1
Basal retrochiasmatic areaipsiBRCh1
Retrochiasmatic area lateral partipsiRChL-2
Retrochiasmatic area immediately caudal to the suprarchiasmatic areaipsiRChcSCh0.5
ThalamusipsiT-0.5
Central medial thalamic nucleus caudal partipsiCMca2
Central medial thalamic nucleus rostral partipsiCMr2
Parafascicular thalamic nucleus medial partipsiPFM3
Rhomboid thalamic nucleusipsiRh1
Medial group of the dorsal thalamusipsiMED2
Mediodorsal thalamic nucleusipsiMD2
Paratenial thalamic nucleusipsiPT1
Paraventricular thalamic nucleusipsiPV0.5
Paraventricular thalamic nucleus anterior partipsiPVA-0.5
Paraventricular thalamic nucleus caudal partipsiPVca1
Paraventricular thalamic nucleus dorsal partipsiPVdo1
Paraventricular thalamic nucleus posterior partipsiPVP1
Paraventricular thalamic nucleus rostral partipsiPVr1
Paraventricular thalamic nucleus ventral partipsiPVV1
Reuniens thalamic nucleusipsiRe1
Posterior periventricular thalamic nucleusipsiPoPeT-0.5
Subfornical organipsiSFO1
Reticular thalamic nucleus rostral partipsiRtr3
Medial subdivision of the rostral part of the reticular thalamic nucleusipsiRtrM3
Reticular thalamic nucleus rostroventral partipsiRtrv-0.5
Subparafascicular thalamic nucleusipsiSPF3
Subparafascicular thalamic nucleus rostral partipsiSPFr3
Zona incertaipsiZI3
Nucleus of the fields of ForelipsiF0.5
Zona incerta dorsal partipsiZID-0.5
Zona incerta medial partipsiZIm-0.5
Zona incerta ventral partipsiZIV-0.5
Tuber cinereum areaipsiTC1
Lateral habenular nucleusipsiLHb-0.5
Medial habenular nucleusipsiMHb1.5
Pretectal regionipsiPRT1
Anterior pretectal nucleus caudal partipsiAPTca1
Anterior pretectal nucleus rostral partipsiAPTro1
Ventral bank of the rhinal fissure dorsal partipsiVBrfD-0.5
Amygdaloid complexipsiAC1
Anterior basomedial nucleusipsiBMA0.5
Posterior basomedial nucleusipsiBMP-0.5
Bed nucleus of the stria terminalisipsiBST2
Bed nucleus of the stria terminalis anterior division dorsomedial nucleusipsiBSTdm2
Bed nucleus of the stria terminalis anterior dorsal areaipsiBSTAD0.5
Bed nucleus of the stria terminalis anterior medial partipsiBSTAM1
Bed nucleus of the stria terminalis anterior ventral areaipsiBSTAV1
Bed nucleus of the stria terminalis lateral divisionipsiBSTL-1
Bed nucleus of the stria terminalis lateral division dorsal partipsiBSTLD-0.5
Bed nucleus of the stria terminalis dorsal nucleusipsiBSTd2
Bed nucleus of the stria terminalis interfascicular nucleusipsiBSTif1
Bed nucleus of the stria terminalis principal nucleusipsiBSTpr0.5
Bed nucleus of the stria terminalis ventral partipsiBNSTv1
Bed nucleus of the stria terminalis ventral tipipsiBNSTvt2
Central amygdaloid nucleusipsiCe1
Central amygdaloid nucleus medial divisionipsiCeM2
Interstitial nucleus of the posterior limb of the anterior commissure medial partipsiIPACM1
Anterior amygdaloid areaipsiAA1
Anterior cortical amygdaloid nucleusipsiACo2
Medial amygdaloid nucleusipsiMe3
Medial amygdaloid nucleus anteroventral partipsiMeAV1
Amygdalohippocampal areaipsiAHi2
ClaustrumipsiCl1
Anterior part of the claustrumipsiACl3
Globus pallidusipsiGP2
Caudal globus pallidusipsiGPc1
Peripallidal regionipsiPePa3
Subpallidal regionipsiSuPa2
Ventral pallidumipsiVP1
Ventral pallidum caudal partipsiVPc1
Ventral pallidum lateral partipsiVPlp1
Accumbens nucleusipsiAc-0.5
Parasubthalamic nucleusipsiPSTh1
HippocampusipsiHIPP-0.5
Dorsal hippocampusipsiHIPPd3
Dentate gyrusipsiDG1
Field CA1 of hippocampus dorsalipsiCA1d1
Field CA1 of hippocampus ventral partipsiCA1v2
Field CA1 of hippocampus ventral poleipsiCA1vp1
SubiculumipsiS2
Intermediate subiculum ventral partipsiSivp2
Subiculum dorsal partipsiSd-0.5
Subiculum dorsal proximal partipsiSdp-0.5
Dorsal subiculum lateral partipsiSdLa1
Molecular layer of the subiculumipsiSumo1
Subiculum stratum pyramidaleipsiSupyr3
Subiculum ventral partipsiSv3
Subiculum ventral distal partipsiSvd3
Subiculum ventral proximal partipsiSvp3
Subiculum ventral part pyramidal layeripsiSvPy3
Fornixipsif3
PresubiculumipsiPrS0.5
Presubiculum mid-septotemporal partipsiPrSmst1
ParasubiculumipsiPaS3
Entorhinal cortexipsiEnt-0.5
Piriform cortexipsiPir1
Postpiriform transition areaipsiTR1
Retrosplenial regionsipsiRS1
Retrosplenial cortex posterior partipsiRSpo1
Retrosplenial regions deep layersipsiRSdeL-0.5
Retrosplenial cortexipsiRSCx0.5
Retrosplenial agranular cortexipsiRSA1
Midrostrocaudal part of the retrosplenial dysgranular cortexipsiRSdysmrc-0.5
Retrosplenial granular a cortex middle part layer 2ipsiRSGaMiL21
Retrosplenial granular a cortex middle part layer 3ipsiRSGaMiL31
Retrosplenial granular a cortex middle part layer 4ipsiRSGaMiL41
Retrosplenial granular a cortex middle part layer 5ipsiRSGaMiL51
Retrosplenial granular a cortex middle part layer 6ipsiRSGaMiL61
Retrosplenial granular cortex b region rostrocaudal middle layersipsiRSGbrcmL1
Cerebral cortex layer 1ipsiCCL12
Anterior cingulate cortexipsiACC3
Anterior cingulate cortex deep layersipsiACCdL3
Cingulate cortex area 1ipsiCg13
Cingulate cortex area 1 caudal partipsiCg1c1.5
Cingulate cortex area 2 caudal partipsiCg2c1.5
Cingulate cortex area 3 layer 5ipsiCg3L51
Dorsal anterior cingulate cortexipsiDACC1
Ventral anterior cingulate cortexipsiVACC3
Cingulumipsicg-0.5
Posterior cingulate cortexipsiPCC1
Cingulate cortex agranular partipsiCgag3
Prelimbic cortexipsiPrL3
Prelimbic cortex dorsal partipsiPrLd1
Prelimbic cortex dorsal part layer 5ipsiPrLdL5-0.5
Prelimbic cortex ventral partipsiPrLv2.5
Infralimbic cortexipsiIL3
Infralimbic cortex layer 6ipsiILL63
Infralimbic cortex rostral partipsiILR1.5
NeocortexipsiNEOCX-0.5
Frontal cortex area 2ipsiFr22
Parietal association cortexipsiPtA0.5
Parietal cortex posterior area medial portionipsimPPC1
Temporal association area 2ipsiTe2-0.5
Insular cortexipsiICX-0.5
Agranular insular cortex rostral partipsiRAIC3
Perirhinal cortexipsiA351
Perirhinal cortex anterior portionipsiPRha3
Perirhinal cortex anterior portion layer 3 to layer 5ipsiPRhaL3L51
Perirhinal cortex anterior portion layer 5ipsiPRhaL52.5
Perirhinal cortex anterior portion layer 5 to layer 6ipsiPRhaL5L63
Perirhinal cortex anterior portion layer 6ipsiPRhaL63
Ectorhinal cortexipsiA36-0.5
Dorsal peduncular cortexipsiDP1
Motoric regionsipsiM-0.5
Lateral agranular prefrontal cortexipsiAGl1
Medial prefrontal cortexipsimPFC3
Medial prefrontal cortex ventral partipsimPFCV-0.5
Medial agranular prefrontal cortexipsiAGm3
Primary somatosensory cortexipsiS10.5
Ventral medial prefrontal cortexipsivmPFC-0.5
Medial orbital cortexipsiMO3
Ventral orbital cortexipsiVO2
Ventrolateral orbital areaipsiVLO1
Orbitomedial prefrontal cortexipsiOMPFC-0.5
Precommissural nucleusipsiPrC-0.5
Lateral geniculate complexipsiLG-0.5
Intergeniculate leafipsiIGL2
Intergeniculate leaf rostrocaudal partipsiIGLR2
Ventral lateral geniculate nucleusipsiVLG1
Ventral lateral geniculate nucleus medial partipsiVLGM-0.5
Ventral lateral geniculate nucleus parvicellular partipsiVLGPC-0.5
Medial geniculate nucleusipsiMG-0.5
Interpeduncular nucleusipsiIP1
Anterior olfactory nucleusipsiAON1
Lateral septal nucleusipsiLS2
Lateral septal nucleus caudal partipsiLSc-0.5
Lateral septal nucleus dorsal partipsiLSD-2
Lateral septal nucleus intermediate partipsiLSI-2
Lateral septal nucleus rostral part dorsolateral zoneipsiLSrdl1
Ventrally lateral septal nucleus rostral part medial zoneipsiLSrmV2
Lateral septal nucleus ventral partipsiLSV2
Anteroposterior extension of the lateral septal nucleusipsiLSap-2
Ventroposterior extension of the lateral septal nucleusipsiLSvp-2
Ventral medial septumipsiVMSe-0.5
Ventrolateral septal regionipsiVLSER1
Spinal cordipsiMES2
Cervical segment 1ipsiCS1-3
Intermediomedial cell column C1ipsiIMMC1-3
Lateral cervical nucleus C1ipsiLatCC1-3
Lateral spinal nucleus C1ipsiLSpC1-3
Area X C1ipsiSCL10C1-3
Dorsal horn C1ipsiDHC1-3
Spinal cord layer 1 C1ipsiSCL1C1-3
Cervical segment 2ipsiCS2-3
Intermediomedial cell column C2ipsiIMMC2-3
Lateral cervical nucleus C2ipsiLatCC2-3
Lateral spinal nucleus C2ipsiLSpC2-3
Area X C2ipsiSCL10C2-3
Dorsal horn C2ipsiDHC2-3
Spinal cord layer 1 C2ipsiSCL1C2-3
Cervical segment 4ipsiCS4-3
Intermediomedial cell column C4ipsiIMMC4-3
Lateral cervical nucleus C4ipsiLatCC4-3
Lateral spinal nucleus C4ipsiLSpC4-3
Area X C4ipsiSCL10C4-3
Dorsal horn C4ipsiDHC4-3
Spinal cord layer 1 C4ipsiSCL1C4-3
Cervical segment 5ipsiCS5-3
Intermediomedial cell column C5ipsiIMMC5-3
Lateral cervical nucleus C5ipsiLatCC5-3
Lateral spinal nucleus C5ipsiLSpC5-3
Area X C5ipsiSCL10C5-3
Dorsal horn C5ipsiDHC5-3
Spinal cord layer 1 C5ipsiSCL1C5-3
Cervical segment 7ipsiCS7-3
Intermediomedial cell column C7ipsiIMMC7-3
Lateral cervical nucleus C7ipsiLatCC7-3
Lateral spinal nucleus C7ipsiLSpC70.5
Area X C7ipsiSCL10C7-3
Dorsal horn C7ipsiDHC7-3
Spinal cord layer 5 C7ipsiSCL5C70.5
Spinal cord layer 6 C7ipsiSCL6C70.5
Spinal cord layer 3 C7ipsiSCL3C70.5
Spinal cord layer 4 C7ipsiSCL4C70.5
Spinal cord layer 1 C7ipsiSCL1C70.5
Spinal cord layer 2 C7ipsiSCL2C70.5
Spinal cord layer 7 C7ipsiSCL7C70.5
Cervical segment 8ipsiCS8-3
Intermediomedial cell column C8ipsiIMMC8-3
Lateral cervical nucleus C8ipsiLatCC8-3
Lateral spinal nucleus C8ipsiLSpC8-3
Area X C8ipsiSCL10C8-3
Dorsal horn C8ipsiDHC8-3
Spinal cord layer 1 C8ipsiSCL1C8-3
Thoracal segment 4ipsiT4-3
Intermediomedial cell column T4ipsiIMMT4-3
Lateral spinal nucleus T4ipsiLSpT4-3
Area X T4ipsiSCL10T4-3
Dorsal horn T4ipsiDHT4-3
Spinal cord layer 1 T4ipsiSCL1T4-3
Thoracal segment 6ipsiT60.5
Thoracal segment 7ipsiT70.5
Thoracal segment 8ipsiT80.5
Intermediomedial cell column T8ipsiIMMT8-3
Lateral spinal nucleus T8ipsiLSpT8-3
Area X T8ipsiSCL10T8-3
Dorsal horn T8ipsiDHT8-3
Spinal cord layer 1 T8ipsiSCL1T8-3
Thoracal segment 9ipsiT90.5
Thoracal segment 12ipsiT12-3
Intermediomedial cell column T12ipsiIMMT12-3
Lateral spinal nucleus T12ipsiLSpT12-3
Area X T12ipsiSCL10T12-3
Dorsal horn T12ipsiDHT12-3
Spinal cord layer 1 T12ipsiSCL1T12-3
Lumbar segment 1ipsiL1-3
Intermediomedial cell column L1ipsiIMML1-3
Lateral spinal nucleus L1ipsiLSpL1-3
Area X L1ipsiSCL10L1-3
Dorsal horn L1ipsiDHL1-3
Spinal cord layer 1 L1ipsiSCL1L1-3
Lumbar segment 2ipsiL2-3
Intermediomedial cell column L2ipsiIMML2-3
Lateral spinal nucleus L2ipsiLSpL2-3
Area X L2ipsiSCL10L2-3
Dorsal horn L2ipsiDHL2-3
Spinal cord layer 1 L2ipsiSCL1L2-3
Lumbar segment 3ipsiL3-3
Intermediomedial cell column L3ipsiIMML3-3
Lateral spinal nucleus L3ipsiLSpL3-3
Area X L3ipsiSCL10L3-3
Dorsal horn L3ipsiDHL3-3
Spinal cord layer 1 L3ipsiSCL1L3-3
Lumbar segment 4ipsiL4-3
Intermediomedial cell column L4ipsiIMML4-3
Lateral spinal nucleus L4ipsiLSpL4-3
Area X L4ipsiSCL10L4-3
Dorsal horn L4ipsiDHL4-3
Spinal cord layer 1 L4ipsiSCL1L4-3
Lumbar segment 5ipsiL5-3
Intermediomedial cell column L5ipsiIMML5-3
Lateral spinal nucleus L5ipsiLSpL5-3
Area X L5ipsiSCL10L5-3
Dorsal horn L5ipsiDHL5-3
Spinal cord layer 1 L5ipsiSCL1L5-3
Lumbar segment 6ipsiL60.5
Intermediomedial cell column L6ipsiIMML6-3
Lateral spinal nucleus L6ipsiLSpL6-3
Area X L6ipsiSCL10L6-3
Dorsal horn L6ipsiDHL6-3
Spinal cord layer 1 L6ipsiSCL1L6-3
Sacral segment 2ipsiSa2-3
Intermediomedial cell column S2ipsiIMMS2-3
Lateral spinal nucleus S2ipsiLSpS2-3
Area X S2ipsiSCL10S2-3
Dorsal horn S2ipsiDHS2-3
Spinal cord layer 1 S2ipsiSCL1S2-3
Central graycontraCG1
Superior colliculus lateral partcontraSCL1
Superior colliculus medial partcontramSC1
Dorsal tegmental nucleuscontraDTg1
Dorsal tegmental nucleus lateral partcontraDLTN1
Nucleus incertus pars compactacontraNIc2
Nucleus incertus pars dissipatacontraNId2
Mesencephalic reticular formationcontraMRF1
Pontine reticular nucleus oral partcontraPnO1
Pontine reticular nucleus caudal partcontraPNC-0.5
Parabrachial nucleuscontraPB1
Gigantocellular reticular nucleuscontraGi-0.5
Dorsal raphe nucleus caudal partcontraDRC3
Intermediate hypothalamic cell groupscontraIHCG-0.5
Medial preoptic areacontraMPA-0.5
Tuberal nucleuscontraTU1
Anterior hypothalamic areacontraAHA-0.5
Anterior hypothalamic area immediately caudal to the suprachiasmatic areacontraAHAcSCh-0.5
Dorsal hypothalamic areacontraDA-0.5
Ventromedial hypothalamic nucleuscontraVMH-0.5
Ventromedial hypothalamic nucleus anterior partcontraVMHA0.5
Ventromedial hypothalamic nucleus central partcontraVMHC0.5
Ventromedial hypothalamic nucleus dorsomedial partcontraVMHDM1
Ventromedial hypothalamic nucleus ventrolateral partcontraVMHVL-0.5
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]contraPaAP-0.5
Ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]contravPaAP-0.5
Adjacent to the ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]contraPaAPav-0.5
Paraventricular hypothalamic nucleuscontraPa-0.5
Anterior part of periventricular parvocellular subdivision of paraventricular hypothalamic nucleuscontraPVPapvA-0.5
Preoptic periventricular nucleuscontraPePO-0.5
Suprachiasmatic nucleus dorsal divisioncontraSChd-0.5
Suprachiasmatic nucleus dorsomedial partcontraSCnDM-0.5
Suprachiasmatic nucleus ventrolateral partcontraSCnVL-0.5
Region dorsal to suprachiasmatic nucleuscontraSChDT-0.5
Suprachiasmatic preoptic nucleuscontraPSCh-0.5
Perifornical nucleuscontraPeF-0.5
Retrochiasmatic area immediately caudal to the suprarchiasmatic areacontraRChcSCh-0.5
Medial group of the dorsal thalamuscontraMED1
Mediodorsal thalamic nucleuscontraMD1
Reticular thalamic nucleus rostral partcontraRtr3
Medial subdivision of the rostral part of the reticular thalamic nucleuscontraRtrM3
Zona incerta caudal partcontraZIC-0.5
Medial habenular nucleuscontraMHb0.5
Anterior pretectal nucleus caudal partcontraAPTca0.5
Anterior pretectal nucleus rostral partcontraAPTro0.5
Anterior cortical amygdaloid nucleuscontraACo1
Medial amygdaloid nucleus anterodorsal partcontraMeAD2
Globus palliduscontraGP0.5
Dentate gyruscontraDG0
Field CA1 of hippocampus ventral partcontraCA1v0
Field CA1 of hippocampus ventral polecontraCA1vp1
Subiculum ventral partcontraSv1
Retrosplenial agranular cortexcontraRSA1
Anterior cingulate cortexcontraACC2
Infralimbic cortexcontraIL0
Frontal cortex area 2contraFr22
Parietal association cortexcontraPtA0
Agranular insular cortex rostral partcontraRAIC1
Lateral agranular prefrontal cortexcontraAGl0.5
Medial agranular prefrontal cortexcontraAGm2
Cervical segment 1contraCS14
Cervical segment 2contraCS24
Cervical segment 3contraCS33
Cervical segment 4contraCS42
Cervical segment 5contraCS52
Cervical segment 6contraCS61
Cervical segment 7contraCS72
Lateral spinal nucleus C7contraLSpC70.5
Spinal cord layer 5 C7contraSCL5C70.5
Spinal cord layer 3 C7contraSCL3C70.5
Spinal cord layer 4 C7contraSCL4C70.5
Spinal cord layer 1 C7contraSCL1C70.5
Spinal cord layer 2 C7contraSCL2C70.5
Cervical segment 8contraCS82
Thoracal segment 1contraT11
Thoracal segment 2contraT21
Thoracal segment 3contraT31
Thoracal segment 4contraT40.5
Thoracal segment 5contraT50.5
Thoracal segment 6contraT60.5
Thoracal segment 7contraT71
Thoracal segment 8contraT80.5
Thoracal segment 9contraT92
Thoracal segment 10contraT102
Thoracal segment 11contraT112
Thoracal segment 12contraT121
Thoracal segment 13contraT131
Lumbar segment 1contraL13
Lumbar segment 2contraL23
Lumbar segment 3contraL33
Lumbar segment 4contraL42
Lumbar segment 5contraL52
Lumbar segment 6contraL63
Sacral segment 1contraSa13
Sacral segment 2contraSa23
Sacral segment 3contraSa31
Sacral segment 4contraSa41
Coccygeal segment 1contraCo11
Coccygeal segment 2contraCo21
Coccygeal segment 3contraCo31

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





Homepage | Staff | neuroVIISAS | Rat connectome | Other connectomes | Neuroimaging | Neurodegeneration | Students | Links | Publications