University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Hip flexion motor cortex left


Abbreviation
HFMCx
Color       
Superior regionsHip motor cortex

SynonymsAbbr.Language
Hip flexion motor cortexHFMCx 

Output to

NameSideAbbr.WeightDetails
Peripeduncular nucleus dorsal partipsiPPdo3
Peripeduncular nucleus ventral partipsiPPv3
Pontine nuclei dorsolateral partipsiBPNdL3
Pontine nuclei dorsomedial partipsiBPNdm3
Pontine nuclei lateral partipsiBPNL3
Pontine nucleus medial partipsiBPNm3
Peripeduncular nucleus dorsal partcontraPPdo1
Peripeduncular nucleus ventral partcontraPPv1
Pontine nuclei dorsolateral partcontraBPNdL1
Pontine nuclei dorsomedial partcontraBPNdm1
Pontine nuclei lateral partcontraBPNL1
Pontine nucleus medial partcontraBPNm1

Input from

NameSideAbbr.WeightDetails
Lateral hypothalamic areaipsiLH0
Angular thalamic nucleusipsiAng0
Anterodorsal thalamic nucleusipsiAD1
Anteromedial thalamic nucleusipsiAM1
Anteroventral thalamic nucleusipsiAV0
Anteroventral thalamic nucleus dorsomedial partipsiAVDM2
Anteroventral thalamic nucleus ventrolateral partipsiAVVL0
Central medial thalamic nucleusipsiCM1
Centrolateral thalamic nucleusipsiCL1
Paracentral thalamic nucleusipsiPC0
Rhomboid thalamic nucleusipsiRh0
Posterior thalamic nuclear groupipsiPo1
Ventrolateral thalamic nucleusipsiVL1
Ventral posterolateral thalamic nucleusipsiVPL2
Ventromedial thalamic nucleusipsiVM0
Ethmoid thalamic nucleusipsiEth0
Lateral posterior thalamic nucleus laterorostral partipsiLPLR0
Lateral posterior thalamic nucleus mediorostral partipsiLPMR2
Laterodorsal thalamic nucleus dorsomedial partipsiLDDM2
Laterodorsal thalamic nucleus ventrolateral partipsiLDVL3
Zona incertaipsiZI0
ClaustrumipsiCl2
Retrosplenial agranular cortexipsiRSA1
Retrosplenial granular cortex subdivisionsipsiRSGsu1
Cingulate cortex area 1ipsiCg11
Cingulate cortex area 2ipsiCg21
Cingulate cortex area 3ipsiCg31
Frontal cortex area 1ipsiFr13
Frontal cortex area 2ipsiFr23
Frontal cortex area 3ipsiFr30
Parietal cortex area 1ipsiPar11
Parietal cortex area 2ipsiPar21
Temporal association area 2ipsiTe20
Temporal association area 3ipsiTe31
Temporal association cortex 1ipsiTeA0
Insular cortexipsiICX1
Perirhinal cortexipsiA351
Primary somatosensory cortex forelimb regionipsiS1FL1
Primary somatosensory cortex hindlimb regionipsiS1HL2
Secondary visual cortex mediolateral areaipsiV2ML1
Secondary visual cortex mediomedial areaipsiV2MM1
Secondary visual cortex lateral areaipsiV2L1
Lateral orbital cortexipsiLO1
Medial orbital cortexipsiMO1
Ventral orbital cortexipsiVO1
Ventrolateral orbital areaipsiVLO1

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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