University of Rostock

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Rat connectome



Whiskers motor cortex layer 5 left


Abbreviation
WMCxL5
Color       
Superior regionsWhiskers motor cortex layers

SynonymsAbbr.Language
Whiskers motor cortex layer 5WMCxL5 

SubregionsSide
Whiskers motor cortex layer 5aleft
Whiskers motor cortex layer 5bleft

Output to

NameSideAbbr.WeightDetails
Central grayipsiCG-2
Parafascicular thalamic nucleusipsiPF-0.5
Posterior thalamic nuclear group dorsal partipsiPoDo2
Ventromedial thalamic nucleusipsiVM-0.5
Intralaminar nuclei anterior partipsiILNA-0.5
Internal capsuleipsiic1
Cerebral peduncle basal partipsicp1
Corpus callosumipsicc-2
StriatumipsiSTR-2
Retrosplenial agranular cortex layer 5ipsiRSAL5-0.5
Retrosplenial agranular cortex layer 1ipsiRSAL1-0.5
Perirhinal cortex layer 1ipsiA35L1-0.5
Perirhinal cortex layer 5ipsiA35L5-0.5
Whiskers motor cortex layer 5ipsiWMCxL53
Whiskers motor cortex layer 6ipsiWMCxL63
Primary somatosensory cortex layer 5ipsiS1L53
Primary somatosensory cortex layer 6ipsiS1L63
Primary somatosensory cortex layer 6aipsiS1L6a3
Primary somatosensory cortex layer 1ipsiS1L13
Lateral orbital cortex layer 1ipsiLOLaL1-0.5
Lateral orbital cortex layer 5ipsiLOLaL5-0.5
Ventrolateral orbital area layer 5ipsiVLOL5-0.5
Ventrolateral orbital area layer 1ipsiVLOL1-0.5
Commissural systemsipsicos-2
ClaustrumcontraCl0.5
StriatumcontraSTR1.5
Dorsolateral striatumcontraCPudl1
Parietal association cortexcontraPtA1
Perirhinal cortexcontraA351
Whiskers motor cortexcontraWMCx3
Whiskers motor cortex layer 3contraWMCxL33
Whiskers motor cortex layer 5contraWMCxL53
Whiskers motor cortex layer 6contraWMCxL63
Primary somatosensory cortex layer 6contraS1L63
Secondary somatosensory cortexcontraS21

Input from

NameSideAbbr.WeightDetails
Parietal cortex area 1ipsiPar10.5
Whiskers motor cortex layer 5ipsiWMCxL53
Whiskers motor cortex layer 6ipsiWMCxL63
Primary somatosensory cortex barrel fieldipsiS1BF-0.5
Whiskers motor cortex layer 5contraWMCxL53
Whiskers motor cortex layer 6contraWMCxL63

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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