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Rat connectome



Primary visual cortex lateral part left


Abbreviation
V1La
Color       
Superior regionsPrimary visual cortex

SynonymsAbbr.Language
Lateral segment of the primary visual cortex Eng
Primary visual cortex lateral partV1LaEng
Lateral occipital cortex Eng
Lateral primary visual cortex Eng
Lateral occipital area 2 Eng

SubregionsSide
Primary visual cortex lateral part layersleft
Primary visual cortex lateral borderleft
Lateral one-third of the primary visual cortexleft
Nasal portion of the visual field of the lateral primary visual cortexleft

Output to

NameSideAbbr.WeightDetails
Central grayipsiCG-2
Superior colliculusipsiSC-2
Superior colliculus anterior partipsiSCA3
Superior colliculus anterior halfipsiSCAh-0.5
PonsipsiP-0.5
Lateral posterior thalamic nucleusipsiLP-0.5
Reticular thalamic nucleus medial partipsiRtm2
Lateral amygdaloid nucleusipsiLA1
Caudate putamenipsiCPu-0.5
Area prostriataipsiPros-0.5
Temporal association area 3ipsiTe3-0.5
Perirhinal cortexipsiA35-0.5
Perirhinal cortex upper partipsiPRhu-0.5
Primary visual cortexipsiV1-0.5
Primary visual cortex lateral partipsiV1La-0.5
Primary visual cortex layer 5ipsiV1L5-2
Primary visual cortex layer 6ipsiV1L6-2
Secondary visual cortex medial areaipsiV2M-0.5
Secondary visual cortex lateral areaipsiV2L-0.5
Lateromedial area of subdivision 18a in lateral extrastriate cortex layers layer 1ipsiLMV2LL1-0.5
Lateromedial area of subdivision 18a in lateral extrastriate cortex layers layer 2ipsiLMV2LL2-0.5
Lateromedial area of subdivision 18a in lateral extrastriate cortex layers layer 3ipsiLMV2LL3-0.5
Lateromedial area of subdivision 18a in lateral extrastriate cortex layers layer 4ipsiLMV2LL4-0.5
Lateromedial area of subdivision 18a in lateral extrastriate cortex layers layer 5ipsiLMV2LL5-0.5
Lateromedial area of subdivision 18a in lateral extrastriate cortex layers layer 6ipsiLMV2LL6-0.5
Secondary visual cortex lateral area posterior part layers layer 1ipsiV2LpL1-0.5
Secondary visual cortex lateral area posterior part layers layer 2ipsiV2LpL2-0.5
Secondary visual cortex lateral area posterior part layers layer 3ipsiV2LpL3-0.5
Secondary visual cortex lateral area posterior part layers layer 4ipsiV2LpL4-0.5
Secondary visual cortex lateral area posterior part layers layer 5ipsiV2LpL5-0.5
Secondary visual cortex lateral area posterior part layers layer 6ipsiV2LpL6-0.5
Primary visual cortex monocular areaipsiV1M-0.5
Lower half of the medial part of the anterolateral extrastriate cortexipsiLhMALExCx2
Lateral part of the anterolateral extrastriate cortexipsiLALExCx-0.5
Lower half of the anteromedial extrastriate cortexipsiLhAMExCx2
Medial part of the anterolateral part of the lateral extrastriate cortexipsiVISLaLm3
Far lateral extrastriate cortex layer 1ipsiVISFLL1-0.5
Far lateral extrastriate cortex layer 2ipsiVISFLL2-0.5
Far lateral extrastriate cortex layer 3ipsiVISFLL3-0.5
Far lateral extrastriate cortex layer 4ipsiVISFLL4-0.5
Far lateral extrastriate cortex layer 5ipsiVISFLL5-0.5
Far lateral extrastriate cortex layer 6ipsiVISFLL6-0.5
Laterolateral extrastriate cortex layer 2ipsiVISLL23
Laterolateral extrastriate cortex layer 3ipsiVISLL33
Laterolateral extrastriate cortex layer 4ipsiVISLL43
Laterolateral extrastriate cortex lower part of layer 5ipsiVISLLpL52.5
Laterolateral extrastriate cortex upper half of layer 6ipsiVISLuhL62.5
Medial part of the lateromedial part of the lateral extrastriate cortexipsiVISLLMM3
Medial part of the lateromedial extrastriate cortex layer 2ipsiMLMExCxL23
Medial part of the lateromedial extrastriate cortex layer 3ipsiMLMExCxL33
Medial part of the lateromedial extrastriate cortex layer 4ipsiMLMExCxL43
Medial part of the lateromedial extrastriate cortex lower part of layer 5ipsiMLMExCxLpL52.5
Medial part of the lateromedial extrastriate cortex upper half of layer 6ipsiUhMLMExCxL62.5
Lateral part of the lateromedial extrastriate cortexipsiLLMExCx-0.5
Medial extrastriate cortexipsiVISM3
Posterior extrastriate cortex layer 2ipsiPExCxL2-1
Posterior extrastriate cortex layer 3ipsiPExCxL3-1
Posterior extrastriate cortex layer 4ipsiPExCxL4-1
Posterior extrastriate cortex layer 5ipsiPExCxL5-1
Posterior extrastriate cortex layer 6ipsiPExCxL6-1
Posterolateral extrastriate cortex layer 2ipsiExCxPLL23
Posterolateral extrastriate cortex layer 3ipsiExCxPLL33
Posterolateral extrastriate cortex layer 4ipsiExCxPLL43
Posterolateral extrastriate cortex layer 5ipsiExCxPLL52.5
Posterolateral extrastriate cortex upper half of layer 6ipsiExCxPLuhL62.5
Commissural systemsipsicos-2
Dorsal geniculate nucleus lateral partipsiDLGl3
Dorsal geniculate nucleus lateral part medial partipsiDLGLM2
Medial geniculate nucleus medial partipsiMGM-0.5
Auditory regionscontraAU0.5
Visual regionscontraVR3
Area 17 area 18 border regioncontraVR1B24
Primary visual cortex lateral partcontraV1La-0.5
Primary visual cortex lateral part layer 5contraV1LaL5-0.5
Primary visual cortex lateral part layer 6contraV1LaL6-0.5
Secondary visual cortex lateral area layer 5contraV2LL5-0.5
Secondary visual cortex lateral area layer 6contraV2LL6-0.5
Primary visual cortex monocular areacontraV1M0

Input from

NameSideAbbr.WeightDetails
Central grayipsiCG-2
Dorsal part of the lateral geniculate complexipsiLGd3
Ventral part of the lateral geniculate complexipsiLGv3
Lateral posterior thalamic nucleusipsiLP-0.5
Retrosplenial agranular cortexipsiRSA-0.5
Retrosplenial agranular cortex layer 5ipsiRSAL5-0.5
Retrosplenial agranular cortex layer 6bipsiRSAL6b-0.5
Retrosplenial agranular cortex layer 3ipsiRSAL3-0.5
Area prostriataipsiPros-0.5
Area prostriata layer 5ipsiProL5-0.5
Area prostriata layer 6bipsiProL6b-0.5
Primary visual cortexipsiV1-0.5
Primary visual cortex lateral partipsiV1La-0.5
Primary visual cortex layer 5ipsiV1L5-2
Primary visual cortex layer 6ipsiV1L6-2
Visual regions layer 2ipsiVRL21.5
Visual regions layer 3ipsiVRL33
Visual regions layer 4ipsiVRL41.5
Visual regions layer 5ipsiVRL53
Visual regions layer 6ipsiVRL61.5
Secondary visual cortexipsiV2-0.5
Secondary visual cortex medial area layer 3ipsiV2ML3-0.5
Secondary visual cortex medial area layer 5ipsiV2ML5-0.5
Secondary visual cortex medial area layer 6bipsiV2ML6b-0.5
Secondary visual cortex lateral areaipsiV2L-0.5
Lower half of the medial part of the anterolateral extrastriate cortexipsiLhMALExCx1
Lateral part of the anterolateral extrastriate cortexipsiLALExCx-0.5
Lower half of the anteromedial extrastriate cortexipsiLhAMExCx1
Laterolateral extrastriate cortex layer 2ipsiVISLL22
Laterolateral extrastriate cortex layer 3ipsiVISLL32
Laterolateral extrastriate cortex layer 4ipsiVISLL42
Laterolateral extrastriate cortex layer 5ipsiVISLL52
Laterolateral extrastriate cortex upper half of layer 6ipsiVISLuhL62
Medial part of the lateromedial extrastriate cortex layer 2ipsiMLMExCxL22
Medial part of the lateromedial extrastriate cortex layer 3ipsiMLMExCxL32
Medial part of the lateromedial extrastriate cortex layer 4ipsiMLMExCxL42
Medial part of the lateromedial extrastriate cortex layer 5ipsiMLMExCxL52
Medial part of the lateromedial extrastriate cortex upper half of layer 6ipsiUhMLMExCxL62
Lateral part of the lateromedial extrastriate cortexipsiLLMExCx-0.5
Posterior extrastriate cortex layer 2ipsiPExCxL2-1
Posterior extrastriate cortex layer 3ipsiPExCxL3-1
Posterior extrastriate cortex layer 4ipsiPExCxL4-1
Posterior extrastriate cortex layer 5ipsiPExCxL5-1
Posterior extrastriate cortex layer 6ipsiPExCxL6-1
Posterolateral extrastriate cortex layer 2ipsiExCxPLL22
Posterolateral extrastriate cortex layer 3ipsiExCxPLL32
Posterolateral extrastriate cortex layer 4ipsiExCxPLL42
Posterolateral extrastriate cortex layer 5ipsiExCxPLL52
Posterolateral extrastriate cortex upper half of layer 6ipsiExCxPLuhL62
Commissural systemsipsicos-2
Geniculate bodyipsiGB3
Dorsal geniculate nucleus lateral part medial partipsiDLGLM-0.5
Lateral geniculate complex medial partipsiLGm3
Ventromedial margin of the lateral geniculate nucleusipsiVMmLG3
Medial part of the dorsal part of the lateral geniculate complexipsiLGDM3
Ventrolateral part of the lateral geniculate nucleusipsiVLLG1
Medial geniculate nucleusipsiMG3
Medial geniculate nucleus medial partipsiMGM-0.5
Ventral part of the lateral geniculate complexcontraLGv2
RetinacontraRET-10
Area 29dcontraA29d-1
Area 17 area 18a border regioncontraVR1B2a3
Primary visual cortexcontraV11
Primary visual cortex lateral partcontraV1La-0.5
Primary visual cortex lateral part layer 3contraV1LaL33
Primary visual cortex lateral part layer 4contraV1LaL43
Primary visual cortex lateral part layer 5contraV1LaL53
Primary visual cortex lateral part layer 6contraV1LaL63
Primary visual cortex lateral part layer 2contraV1LaL23
Primary visual cortex deep layerscontraV1dL1
Secondary visual cortex medial areacontraV2M-1
Secondary visual cortex medial area layer 4contraV2ML43
Secondary visual cortex medial area layer 3contraV2ML33
Secondary visual cortex medial area layer 2contraV2ML23
Secondary visual cortex medial area layer 5contraV2ML53
Secondary visual cortex medial area layer 6contraV2ML63
Secondary visual cortex lateral areacontraV2L1
Primary visual cortex monocular areacontraV1M-1
Geniculate bodycontraGB2
Lateral geniculate complex medial partcontraLGm2
Ventromedial margin of the lateral geniculate nucleuscontraVMmLG2
Ventrolateral part of the lateral geniculate nucleuscontraVLLG0.5
Medial geniculate nucleuscontraMG2

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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