University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Spinal cord layers T9 left


Abbreviation
SCLT9
Color       
Superior regionsThoracal segment 9

SynonymsAbbr.Language
Spinal cord layers T9SCLT9Eng

SubregionsSide
Area X T9left
Dorsal horn T9left
Ventral horn T9left

Output to

NameSideAbbr.WeightDetails
CerebellumipsiCERE2
Anterior lobeipsiAnL2
Lateral parabrachial nucleus lateral partipsiLPBL0.5
Ventral part of spinal trigeminal nucleus oral partipsiSp5OV-0.5
Nucleus ZipsiZ2
Inferior oliveipsiIO0.5
Dorsal thalamusipsiDOR1
Ventrobasal complex medial partipsiVBM1.5
Lateral posterior thalamic nucleusipsiLP1.5
Spinal nucleus of the bulbocavernosus lumbal segment 5ipsiBCL51
Spinal nucleus of the bulbocavernosus lumbal segment 6ipsiBCL61
Lateral parabrachial nucleus lateral partcontraLPBL1
Ventral part of spinal trigeminal nucleus oral partcontraSp5OV-0.5
Inferior olivecontraIO2
Dorsal thalamuscontraDOR2
Bulbocavernosus muscleipsiMuscBCV-10
Ischiocavernosus muscleipsiMuscicav-10

Input from

NameSideAbbr.WeightDetails
Red nucleusipsiR-0.5
Dorsolateral pontine tegmentumipsiDLPT-0.5
Peduncularpontine nucleusipsiPPN-0.5
Laterodorsal tegmental nucleusipsiLDTg3
Sublaterodorsal tegmental nucleusipsiSLD-0.5
Dorsal tegmental nucleusipsiDTg1
Pedunculopontine tegmental nucleusipsiPPTg2
A5 noradrenaline cellsipsiA52
Locus coeruleus caudal part ventral partipsiLCcV1
Locus coeruleus ventral partipsiLCv3
Prepositus nucleusipsiPr2
Medial reticular formationipsiRFm-0.5
Midline reticular formationipsiMiRF1
Koelliker Fuse nucleusipsiKF1
Gigantocellular reticular nucleusipsiGi2
Lateral reticular nucleusipsiLRt-0.5
Medullary reticular nucleus ventral partipsiMdV2
Subcoeruleus nucleusipsiSubC1
Ambiguus nucleusipsiAmb3
Motor trigeminal nucleusipsiMo53
Vestibular nucleiipsiVnc2
Medial vestibular nucleusipsiMVe2
Nucleus of the solitary tractipsiSol-0.5
Nucleus of the solitary tract dorsolateral partipsiSolDL3
Raphe nucleiipsiRAN-0.5
Raphe magnus nucleusipsiRMg2
Raphe obscurus nucleusipsiROb2
Raphe pallidus nucleusipsiRPa2
Rostral ventrolateral medullaipsiRVLM1
Lateral paragigantocellular nucleusipsiLPGi2
Dorsomedial hypothalamic nucleusipsiDMHy-0.5
Lateral zoneipsiLHA-0.5
Lateral hypothalamic areaipsiLH-0.5
Ventromedial hypothalamic nucleus ventral partipsiVMHV1
Arcuate nucleusipsiArc1
Paraventricular hypothalamic nucleusipsiPa2
Paraventricular hypothalamic nucleus parvocellular divisionipsiPavPo-0.5
Paraventricular nucleus ventromedial parvocellular partipsiPaVMp2.5
Paraventricular nucleus dorsal partipsiPaDo2.5
Retrochiasmatic areaipsiRCh1
Zona incertaipsiZI2
Red nucleus rostral partcontraRnRo3
Lateral hypothalamic areacontraLH-0.5
Ventromedial hypothalamic nucleus ventral partcontraVMHV0.5
Retrochiasmatic areacontraRCh0.5
Zona incertacontraZI-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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