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Rat connectome



Deep mesencephalic nucleus medial part left


Abbreviation
DpMeM
Color       
Superior regionsDeep mesencephalic nucleus

SynonymsAbbr.Language
Deep mesencephalic nucleus medial partDpMeMEng

Output to

NameSideAbbr.WeightDetails
Substantia nigra compact partipsiSNC1
Reticulotegmental nucleus of the ponsipsiRtTg3
Pontine reticular nucleus oral partipsiPnO3
Pontine reticular nucleus caudal partipsiPNC3
Gigantocellular reticular nucleusipsiGi3
Medullary reticular nucleusipsiMdD3
Pontine raphe nucleusipsiPnR3
Inferior oliveipsiIO2
Superior olive-trapezoid body complexipsiSuOLiTBC-0.5
Mediodorsal thalamic nucleusipsiMD1
Medial globus pallidusipsiMGP1
Ventral funiculusipsivf-2
Dorsal horn C1ipsiDHC1-0.5
Spinal cord layer 5 C1ipsiSCL5C1-0.5
Spinal cord layer 6 C1ipsiSCL6C1-0.5
Spinal cord layer 3 C1ipsiSCL3C1-0.5
Spinal cord layer 4 C1ipsiSCL4C1-0.5
Spinal cord layer 2 C1ipsiSCL2C1-0.5
Spinal cord layer 7 C1ipsiSCL7C1-0.5
Dorsal horn C2ipsiDHC2-0.5
Spinal cord layer 5 C2ipsiSCL5C2-0.5
Spinal cord layer 6 C2ipsiSCL6C2-0.5
Spinal cord layer 3 C2ipsiSCL3C2-0.5
Spinal cord layer 4 C2ipsiSCL4C2-0.5
Spinal cord layer 2 C2ipsiSCL2C2-0.5
Spinal cord layer 7 C2ipsiSCL7C2-0.5
Dorsal horn C3ipsiDHC3-0.5
Dorsal horn C4ipsiDHC4-0.5
Dorsal horn C5ipsiDHC5-0.5
Dorsal horn C6ipsiDHC6-0.5
Dorsal horn C7ipsiDHC7-0.5
Dorsal horn C8ipsiDHC8-0.5
Pontine reticular nucleus oral partcontraPnO2
Pontine reticular nucleus caudal partcontraPNC2
Gigantocellular reticular nucleuscontraGi2
Inferior olivecontraIO-0.5
Spinal cord layer 5 C1contraSCL5C1-0.5
Spinal cord layer 6 C1contraSCL6C1-0.5
Spinal cord layer 3 C1contraSCL3C1-0.5
Spinal cord layer 4 C1contraSCL4C1-0.5
Spinal cord layer 2 C1contraSCL2C1-0.5
Spinal cord layer 7 C1contraSCL7C1-0.5
Spinal cord layer 5 C2contraSCL5C2-0.5
Spinal cord layer 6 C2contraSCL6C2-0.5
Spinal cord layer 3 C2contraSCL3C2-0.5
Spinal cord layer 4 C2contraSCL4C2-0.5
Spinal cord layer 2 C2contraSCL2C2-0.5
Spinal cord layer 7 C2contraSCL7C2-0.5

Input from

NameSideAbbr.WeightDetails
Dorsolateral periaqueductal grayipsiDLPAG2.5
Lateral periaqueductal grayipsiLPAG-1
Periaqueductal gray dorsal partipsiPAGd2
Ventral periaqueductal grayipsiVPAG2
Superior colliculusipsiSC1
Superior colliculus mediolateral partipsiSCmL2
Substantia nigra compact partipsiSNC1
Substantia nigra compact part dorsal tier lateral subsivisionipsiSNCDl2
Substantia nigra reticular partipsiSNR1
Substantia nigra reticular part dorsolateral tieripsiSNRDL2
Parabrachial pigmented nucleusipsiPBP0
Paranigral nucleusipsiPN2
Ventral tegmental nucleusipsiVTg2
Visual tegmental relay zoneipsiViTRZo2
Mesencephalic reticular formation caudal partipsiMRFc1
Lateral reticular nucleusipsiLRt1
Medial subnucleus reticularis ventralisipsiMSRV2
Ventral part of the nucleus medullae oblongatae centralisipsiVMdDc-0.5
Area postremaipsiAP1
Principal sensory trigeminal nucleusipsiPr52
Spinal trigeminal nucleus caudal partipsiSp5C2
Spinal trigeminal nucleus intermediate partipsiSp5nci2
Spinal trigeminal nucleus interpolar part rostralipsiSp5Ir-0.5
Spinal trigeminal nucleus oral partipsiSp5O2
Ventral cochlear nucleusipsiVC1
Nucleus of the solitary tractipsiSol1
Superior oliveipsiSuOLi2
Lateral hypothalamic area caudal partipsiLHc1
Lateral hypothalamic area medial partipsiLHAm1
Lateral hypothalamic area posterolateral partipsiLHPL-1
Zona incerta mediolateral extendipsiZIml3
Medial terminal nucleus of the accessory optic tractipsiMT3
Ventral part of the medial terminal nucleus of the accessory optic tractipsiMTV0
Dorsal part of the medial terminal nucleus of the accessory optic tractipsiMTD2
Medial globus pallidusipsiMGP1
Subthalamic nucleusipsiSTh0
Motoric regions layer 5ipsiMRL51
Primary somatosensory cortex caudal partipsiS1c1
Primary somatosensory cortex middle partipsiS1m1
Sensory regions rostral partipsiSRro1
Secondary visual cortex lateral area layer 5ipsiV2LL51
Spinal cord layer 6 C1ipsiSCL6C12
Spinal cord layer 7 C1ipsiSCL7C12
Cervical segment 2ipsiCS20
Spinal cord layer 6 C2ipsiSCL6C22
Spinal cord layer 7 C2ipsiSCL7C22
Cervical segment 3ipsiCS30
Spinal cord layer 6 C3ipsiSCL6C32
Spinal cord layer 7 C3ipsiSCL7C32
Substantia nigra compact part dorsal tier lateral subsivisioncontraSNCDl2
Substantia nigra reticular part dorsolateral tiercontraSNRDL2
Ventral tegmental nucleuscontraVTg2
Lateral cerebellar nucleuscontraCERL2
Deep mesencephalic nucleuscontraDpMe2
Deep mesencephalic nucleus lateral partcontraDpMeL1
Medial subnucleus reticularis ventraliscontraMSRV2
Ventral part of the nucleus medullae oblongatae centraliscontraVMdDc-0.5
Principal sensory trigeminal nucleuscontraPr52
Spinal trigeminal nucleus caudal partcontraSp5C2
Spinal trigeminal nucleus intermediate partcontraSp5nci2
Spinal trigeminal nucleus oral partcontraSp5O2
Cuneate nucleuscontraCu1
Gracile nucleus principal partcontraGr1
Spinal cord layer 6 C1contraSCL6C12
Spinal cord layer 1 C1contraSCL1C12
Spinal cord layer 6 C2contraSCL6C22
Spinal cord layer 1 C2contraSCL1C22
Spinal cord layer 6 C3contraSCL6C32
Spinal cord layer 1 C3contraSCL1C32

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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