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Rat connectome

Paranigral nucleus left

Abbreviation	PN
Color
Superior regions	Dopaminergic nuclear complex

Synonyms	Abbr.	Language
Nucleus paranigralis	Npn	Eng
Paranigral nucleus	PN	Eng

Subregions	Side
Medial part of the paranigral nucleus	left
Lateral dorsal sector of the nucleus paranigralis	left
Paranigral nucleus lateral part	left
Ventromedial paranigral nucleus	left

Output to

Name	Side	Abbr.	Weight
Nucleus of Darkschewitsch	ipsi	Dk	-0.5
Dorsal terminal nucleus of the accessory optic tract	ipsi	DT	0
Superior colliculus	ipsi	SC	0
Ventral tegmental area A10	ipsi	VTA	3
Ventral tegmental area anterior part ventral layer	ipsi	VTAAv	-0.5
Parabrachial pigmented nucleus	ipsi	PBP	0
Paranigral nucleus	ipsi	PN	0
Interstitial nucleus of Cajal	ipsi	InC	-0.5
Flocculus	ipsi	Fl	0
Locus coeruleus	ipsi	LC	3
Pontine gray	ipsi	PG	0
Reticulotegmental nucleus of the pons	ipsi	RtTg	1
Deep mesencephalic nucleus medial part	ipsi	DpMeM	2
Pontine reticular nucleus oral part	ipsi	PnO	-0.5
Cuneiforme nucleus	ipsi	CnF	-0.5
Superior vestibular nucleus	ipsi	SuVe	0
Lateral vestibular nucleus	ipsi	LVe	0
Inferior olive	ipsi	IO	0
Diagonal band of Broca	ipsi	DBB	3
Nucleus of the optic tract	ipsi	OT	0
Lateral habenular nucleus	ipsi	LHb	3
Lateral habenular nucleus lateral part	ipsi	LHbL	0
Lateral habenular nucleus medial part	ipsi	LHbM	1
Medio lateral habenular nucleus	ipsi	MLHb	2
Medial habenular nucleus dorsal part	ipsi	MHbd	0
Medial habenular nucleus lateral part	ipsi	MHbL	0
Junction medial and lateral habenula	ipsi	HABj	1
Medial terminal nucleus of the accessory optic tract	ipsi	MT	0
Dorsal part of the medial terminal nucleus of the accessory optic tract	ipsi	MTD	-0.5
Amygdaloid complex	ipsi	AC	-0.5
Basolateral amygdaloid nucleus	ipsi	BL	3
Basomedial amygdaloid nucleus	ipsi	BM	3
Bed nucleus of the stria terminalis	ipsi	BST	0.5
Central amygdaloid nucleus	ipsi	Ce	2
Interstitial nucleus of the posterior limb of the anterior commissure	ipsi	IPAC	0.5
Sublenticular extended amygdala	ipsi	SLEA	-0.5
Globus pallidus	ipsi	GP	0
Ventral pallidum	ipsi	VP	3
Ventral pallidum dorsolateral part	ipsi	VPdl	3
Ventral pallidum ventromedial part	ipsi	VPvm	3
Accumbens nucleus	ipsi	Ac	3
Accumbens nucleus core	ipsi	AcbC	3
Accumbens nucleus shell	ipsi	AcbSh	1
Lateral accumbens shell	ipsi	AcbShl	1
Medial accumbens shell	ipsi	AcbShm	4
Lateral nucleus accumbens	ipsi	Acl	4
Medial accumbens	ipsi	AcbM	3
Caudate putamen	ipsi	CPu	2
Anteromedial striatum	ipsi	CPuam	2
Medial striatum	ipsi	CPum	2
Dorsal striatum	ipsi	CPud	0.5
Fundus of the striatum	ipsi	FS	3
Hippocampus	ipsi	HIPP	0
Dentate gyrus	ipsi	DG	2
Field CA1 of hippocampus	ipsi	CA1	2
Field CA3 of hippocampus	ipsi	CA3	2
Subiculum dorsal part	ipsi	Sd	-0.5
Subiculum ventral part	ipsi	Sv	-0.5
Piriform cortex	ipsi	Pir	2
Cingulate cortex	ipsi	Cg	0
Anterior cingulate cortex	ipsi	ACC	2
Prelimbic cortex	ipsi	PrL	-0.5
Infralimbic cortex	ipsi	IL	-0.5
Frontal association cortex	ipsi	FrA	-0.5
Agranular insular cortex dorsal part superficial layers	ipsi	AIDsL	-0.5
Prefrontal cortex	ipsi	PFC	2
Pregenual sector of the prefrontal cortex	ipsi	pgPFC	0.5
Medial prefrontal cortex	ipsi	mPFC	3
Medial prefrontal cortex layer 5	ipsi	mPFCL5	-0.5
Medial prefrontal cortex layer 6	ipsi	mPFCL6	-0.5
Interpeduncular nucleus	ipsi	IP	-0.5
Olfactory tubercle	ipsi	TuO	1
Olfactory tubercle lateral part	ipsi	TuOL	0.5
Olfactory tubercle medial part	ipsi	TuOMP	2
Lateral septal nucleus	ipsi	LS	0.5
Reticulotegmental nucleus of the pons	contra	RtTg	1
Caudate putamen	contra	CPu	1
Dentate gyrus	contra	DG	1
Field CA1 of hippocampus	contra	CA1	1
Field CA3 of hippocampus	contra	CA3	1
Subiculum dorsal part	contra	Sd	-0.5
Subiculum ventral part	contra	Sv	-0.5

Input from

Name	Side	Abbr.	Weight
Central gray	ipsi	CG	3
Periaqueductal gray	ipsi	PAG	3
Tegmental area	ipsi	TGA	2
Peduncularpontine nucleus	ipsi	PPN	2
Rostromedial tegmental nucleus	ipsi	RMTg	2
Substantia nigra compact part	ipsi	SNC	0
Substantia nigra reticular part	ipsi	SNR	0
Ventral tegmental area A10 caudal part	ipsi	VTAcp	2.5
Ventral tegmental area A10 caudoventromedial	ipsi	VTACVM	1
Ventral tegmental area A10 ventrolateral part	ipsi	VTAvl	-0.5
Ventral tegmental area rostral dorsomedial part	ipsi	VTARdm	2
Ventral tegmental area rostral ventrolateral part	ipsi	VTARVL	1
Ventral tegmental area rostral ventromedial part	ipsi	VTARVM	1
Ventral tegmental area caudodorsomedial part	ipsi	VTACDM	2.5
Parabrachial pigmented nucleus	ipsi	PBP	-0.5
Paranigral nucleus	ipsi	PN	0
Laterodorsal tegmental nucleus	ipsi	LDTg	3
Visual tegmental relay zone	ipsi	ViTRZo	0
Medial ventral paraflocculus	ipsi	PFlvM	0
Dorsal raphe nucleus	ipsi	DR	2
Median raphe nucleus	ipsi	MnR	2
Diagonal band of Broca	ipsi	DBB	3
Preoptic region	ipsi	PREO	2
Preoptic nucleus	ipsi	PREn	-0.5
Dorsal tenia tecta	ipsi	DTT	-0.5
Hypothalamus	ipsi	HYPO	-0.5
Lateral hypothalamic area	ipsi	LH	3
Lateral hypothalamic area perifornical part	ipsi	PFx	3
Anterior hypothalamic area	ipsi	AHA	3
Dorsomedial hypothalamic nucleus [Medial zone]	ipsi	DM	3
Dorsomedial hypothalamic nucleus dorsomedial part	ipsi	DMDM	2
Posterior hypothalamic area	ipsi	PHA	2
Tuberal area	ipsi	TA	1
Ventromedial hypothalamic nucleus	ipsi	VMH	3
Paraventricular hypothalamic nucleus	ipsi	Pa	-0.5
Mammillary body	ipsi	CMAM	1
Supramammillar nucleus	ipsi	SuM	2
Habenula	ipsi	HAB	-0.5
Lateral habenular nucleus	ipsi	LHb	-0.5
Lateral habenular nucleus central part	ipsi	LHbc	4
Lateral habenular nucleus lateral part	ipsi	LHbL	4
Lateral habenular nucleus medial part	ipsi	LHbM	4
Lateral habenular nucleus medial part superior subnucleus	ipsi	LHbMS	-0.5
Ventral part of the medial terminal nucleus of the accessory optic tract	ipsi	MTV	0
Dorsal part of the medial terminal nucleus of the accessory optic tract	ipsi	MTD	0
Amygdaloid complex	ipsi	AC	-0.5
Extended amygdala	ipsi	EXA	-0.5
Claustrum	ipsi	Cl	-0.5
Ventral pallidum rostral part	ipsi	VPr	3
Accumbens nucleus	ipsi	Ac	-0.5
Accumbens nucleus core	ipsi	AcbC	1
Accumbens nucleus shell	ipsi	AcbSh	3
Accumbens nucleus caudomedial shell	ipsi	AcbShcm	2
Ventromedial shell	ipsi	AcbShvm	-0.5
Cingulate cortex	ipsi	Cg	2
Anterior cingulate cortex	ipsi	ACC	-0.5
Prelimbic cortex	ipsi	PrL	-0.5
Infralimbic cortex	ipsi	IL	-0.5
Granular insular cortex	ipsi	GI	-0.5
Prefrontal cortex	ipsi	PFC	2
Orbital cortex	ipsi	OrC	-0.5
Septal region	ipsi	SER	-0.5
Lateral septal nucleus	ipsi	LS	2
Lateral septal nucleus dorsal part	ipsi	LSD	-2
Lateral septal nucleus intermediate part	ipsi	LSI	-2
Lateral septal nucleus ventral part	ipsi	LSV	-2
Anteroposterior extension of the lateral septal nucleus	ipsi	LSap	-2
Ventroposterior extension of the lateral septal nucleus	ipsi	LSvp	-2
Central gray	contra	CG	1
Rostromedial tegmental nucleus	contra	RMTg	1.5
Ventral tegmental area A10 caudal part	contra	VTAcp	2.5
Ventral tegmental area A10 caudoventromedial	contra	VTACVM	1
Ventral tegmental area A10 ventrolateral part	contra	VTAvl	-0.5
Ventral tegmental area rostral ventrolateral part	contra	VTARVL	1
Medial ventral paraflocculus	contra	PFlvM	-0.5
Agranular insular cortex ventral part jaw movement area	contra	AIVjm	1

Key for weights

Value	Weight
-3	unknown
-2	fibers of passage
-1	not clear
-0.5	exists
0	not present
0.5	very light
1	light / sparse
1.5	light / moderate
2	moderate / dense
2.5	moderate / strong
3	strong
4	very strong