University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Red nucleus magnocellular part left


Abbreviation
RMC
Color       
Superior regionsRed nucleus

SynonymsAbbr.Language
Red nucleus magnocellular partRMCEng

SubregionsSide
Caudal part of red nucleus magnocellular partleft
Dorsomedial part of the red nucleus magnocellular partleft
Lateral part of the red nucleus magnocellular partleft
Medial part of the red nucleus magnocellular partleft
Red nucleus magnocellular part caudal regionleft
Red nucleus magnocellular part dorsal partleft
Red nucleus magnocellular part ventral partleft
Rostralmost part of red nucleus magnocellular partleft
Ventrolateral part of the red nucleus magnocellular partleft
Red nucleus magnocellular part rostral sectorleft
Red nucleus middle third of the magnocellular partleft

Output to

NameSideAbbr.WeightDetails
Laterodorsal tegmental nucleusipsiLDTg-0.5
Locus coeruleusipsiLC-0.5
Pontine reticular nucleusipsiPRN1
Gigantocellular reticular nucleusipsiGi-0.5
Principal sensory trigeminal nucleusipsiPr51
Spinal trigeminal nucleus interpolar partipsiSp5I-0.5
Lateral vestibular nucleusipsiLVe-0.5
Olivary nucleusipsiON0
Paragigantocellular reticular nucleusipsiPGi1
Mediodorsal thalamic nucleus central partipsiMDC2
Mediodorsal thalamic nucleus lateral partipsiMDL2
Zona incertaipsiZI1
Spinal cordipsiMES-0.5
Spinal cord layer 5 C1ipsiSCL5C13
Spinal cord layer 6 C1ipsiSCL6C13
Spinal cord layer 3 C1ipsiSCL3C13
Spinal cord layer 4 C1ipsiSCL4C13
Spinal cord layer 7 C1ipsiSCL7C13
Spinal cord layer 5 C2ipsiSCL5C23
Spinal cord layer 6 C2ipsiSCL6C23
Spinal cord layer 3 C2ipsiSCL3C23
Spinal cord layer 4 C2ipsiSCL4C23
Spinal cord layer 7 C2ipsiSCL7C23
Spinal cord layer 5 C3ipsiSCL5C33
Spinal cord layer 6 C3ipsiSCL6C33
Spinal cord layer 3 C3ipsiSCL3C33
Spinal cord layer 4 C3ipsiSCL4C33
Spinal cord layer 7 C3ipsiSCL7C33
Spinal cord layer 5 C4ipsiSCL5C43
Spinal cord layer 6 C4ipsiSCL6C43
Spinal cord layer 3 C4ipsiSCL3C43
Spinal cord layer 4 C4ipsiSCL4C43
Spinal cord layer 7 C4ipsiSCL7C43
Spinal cord layer 5 C5ipsiSCL5C53
Spinal cord layer 6 C5ipsiSCL6C53
Spinal cord layer 3 C5ipsiSCL3C53
Spinal cord layer 4 C5ipsiSCL4C53
Spinal cord layer 7 C5ipsiSCL7C53
Spinal cord layer 5 C6ipsiSCL5C63
Spinal cord layer 6 C6ipsiSCL6C63
Spinal cord layer 3 C6ipsiSCL3C63
Spinal cord layer 4 C6ipsiSCL4C63
Spinal cord layer 7 C6ipsiSCL7C63
Spinal cord layer 5 C7ipsiSCL5C73
Spinal cord layer 6 C7ipsiSCL6C73
Spinal cord layer 3 C7ipsiSCL3C73
Spinal cord layer 4 C7ipsiSCL4C73
Ventral horn C7ipsiVHC73
Spinal cord layer 7 C7ipsiSCL7C73
Spinal cord layer 5 C8ipsiSCL5C83
Spinal cord layer 6 C8ipsiSCL6C83
Spinal cord layer 3 C8ipsiSCL3C83
Spinal cord layer 4 C8ipsiSCL4C83
Ventral horn C8ipsiVHC83
Spinal cord layer 7 C8ipsiSCL7C83
Intermediolateral cell column T2ipsiIMLT2-0.5
Spinal cord layers T2ipsiSCLT2-0.5
Intermediolateral cell column T3ipsiIMLT3-0.5
Spinal cord layers T3ipsiSCLT3-0.5
Thoracal segment 6ipsiT6-0.5
Intermediolateral cell column T7ipsiIMLT7-0.5
Intermediolateral cell column T8ipsiIMLT8-0.5
Intermediolateral cell column T9ipsiIMLT9-0.5
Intermediolateral cell column T11ipsiIMLT11-0.5
Intermediolateral cell column T12ipsiIMLT12-0.5
Intermediolateral cell column T13ipsiIMLT13-0.5
Lumbar segmentsipsiLSeg-0.5
Intermediolateral cell column L1ipsiIMLL1-0.5
Sacral segment 1ipsiSa13
Sacral segment 2ipsiSa23
Sacral segment 3ipsiSa33
Sacral segment 4ipsiSa43
Coccygeal segment 1ipsiCo13
Coccygeal segment 2ipsiCo23
Laterodorsal tegmental nucleuscontraLDTg-0.5
Locus coeruleuscontraLC-0.5
Pontine reticular nucleuscontraPRN1
Pontine reticular nucleus oral partcontraPnO1
Lateral parabrachial nucleuscontraLPB-0.5
Gigantocellular reticular nucleuscontraGi-0.5
Parvicellular reticular nucleuscontraPCRt3
Facial nucleuscontra72
Intertrigeminal nucleuscontraI5-0.5
Principal sensory trigeminal nucleuscontraPr51
Spinal trigeminal nucleus interpolar partcontraSp5I-0.5
Ventrorostral part of the oral spinal trigeminal nucleuscontraSp5Ovr-0.5
Ventrocaudal part of the oral spinal trigeminal nucleuscontraSp5Ovc-0.5
Superior vestibular nucleuscontraSuVe-0.5
Lateral vestibular nucleuscontraLVe-0.5
Paragigantocellular reticular nucleuscontraPGi-0.5
Mediodorsal thalamic nucleus central partcontraMDC1
Mediodorsal thalamic nucleus lateral partcontraMDL1
Dorsolateral funiculuscontradlft-2
Dorsolateral funiculus cervical partcontradlftC-2
Cervical segment 1contraCS14
Cervical segment 2contraCS24
Spinal cord layers T2contraSCLT2-0.5
Spinal cord layers T3contraSCLT3-0.5
Lumbar segment 1contraL1-0.5
Lumbar segment 2contraL2-0.5
Lumbar segment 3contraL3-0.5
Lumbar segment 4contraL4-0.5
Lumbar segment 5contraL5-0.5
Lumbar segment 6contraL6-0.5
Sacral segment 1contraSa1-0.5
Sacral segment 2contraSa2-0.5
Sacral segment 3contraSa3-0.5
Sacral segment 4contraSa4-0.5
Intercapsular brown adipose tissueipsiOrgBATi-10

Input from

NameSideAbbr.WeightDetails
Dorsolateral humpipsiCERcndl0
Interposed cerebellar nucleiipsiICN1
Anterior interposed nucleusipsiAIN2
Lateral interposed cerebellar nucleusipsiICNL-0.5
Posterior interposed nucleusipsiCERpin-0.5
Lateral cerebellar nucleusipsiCERL1
Medial cerebellar nucleusipsiMed1
Medial cerebellar nucleus caudal partipsiMedc1
Interstitial cell groupsipsiCERIc-0.5
Principal sensory trigeminal nucleusipsiPr51
Spinal vestibular nucleusipsiSpVe3
Superior vestibular nucleusipsiSuVe3
Medial vestibular nucleusipsiMVe3
Lateral vestibular nucleusipsiLVe3
Zona incertaipsiZI0
Bed nucleus of the stria terminalis oval nucleusipsiBSTo-10
Forelimb motor cortexipsiFMCx2
Caudal forelimb motor areaipsiCFMA-0.5
Dorsolateral humpcontraCERcndl2
Deep cerebellar nucleicontraDNC2
Interposed cerebellar nucleicontraICN3
Anterior interposed nucleuscontraAIN3
Posterior interposed nucleuscontraCERpin3
Posterior interposed nucleus rostroventral partcontraCERpinrv-0.5
Lateral cerebellar nucleuscontraCERL3
Medial cerebellar nucleuscontraMed3
Medial cerebellar nucleus caudal partcontraMedc1
Medial cerebellar nucleus rostrolateral partcontraMedroL-0.5
Principal sensory trigeminal nucleuscontraPr51
Forelimb motor cortexcontraFMCx0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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