University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Deep cerebellar nuclei right


Abbreviation
DNC
Color       
Superior regionsCerebellar nuclei

SynonymsAbbr.Language
Deep cerebellar nucleus Eng
Deep cerebellar nucleiDNCEng

SubregionsSide
Interposed cerebellar nucleiright
Interstitial cell group of Buisseret Delmasright
Lateral cerebellar nucleusright
Medial cerebellar nucleusright

Output to

NameSideAbbr.WeightDetails
Red nucleus magnocellular partcontraRMC2
Red nucleus parvicellular partcontraROC2
TectumcontraTEC1
Caudal part of inferior colliculuscontraICOLC0
Superior colliculuscontraSC1
Pedunculopontine tegmental nucleuscontraPPTg3
Anterior group of the dorsal thalamuscontraATN1
Central medial thalamic nucleuscontraCM1.5
Paracentral thalamic nucleuscontraPC1.5
Parafascicular thalamic nucleuscontraPF1
Posterior thalamic nuclear groupcontraPo1
Caudodorsal part of ventral anterior-lateral complex of the thalamuscontraCDVAL1
Rostroventral part of ventral anterior-lateral complex of the thalamuscontraRVVAL1
Ventrolateral thalamic nucleuscontraVL-0.5
Ventrobasal complexcontraVB2
Ventral posterolateral thalamic nucleuscontraVPL-0.5
Laterodorsal thalamic nucleuscontraLD1
Posteromedian thalamic nucleuscontraPoMn-0.5
Ventral thalamuscontraVNT1
Ventral medial nucleus of the thalamuscontraVMT1
Spinal cord layers C2contraSCLC21
Ventrolateral periaqueductal grayipsiVLPAG0
Red nucleusipsiR2
Caudal part of inferior colliculusipsiICOLC0
Superior colliculusipsiSC2
Superior colliculus intermediate and deep layersipsiSCidLa-0.5
Superior colliculus deep layersipsiSCd1
Peduncularpontine nucleusipsiPPN-0.5
Ventral midbrain tegmentumipsiVeMT-0.5
Substantia nigra compact partipsiSNC0
Substantia nigra reticular partipsiSNR0
Ventral tegmental area A10ipsiVTA3
Middle part of the retrorubral fieldipsiRRmi2
Pedunculopontine tegmental nucleusipsiPPTg3
Zone D of ansiform lobule crus 2ipsiCrus2zD0
Zone D of the paramedian lobuleipsiPMzD0
Zone D of simple lobuleipsiSimzD0
Cerebellar lobule 3b zone C1ipsiCERL3bC10
Cerebellar lobule 4 zone C1ipsiCERL4C10
Cerebellar cortex B zonesipsiBZCERC0
C3-zone of the cerebellar cortexipsiCeZC30
Anterior interposed nucleusipsiAIN0.5
Lateral cerebellar nucleusipsiCERL2
Locus coeruleusipsiLC1
Pontine grayipsiPG1
Pontine gray properipsiPGp-0.5
Reticular systemipsiRF1
Intermediate reticular nucleusipsiIRt0.5
Pontine reticular nucleusipsiPRN-0.5
Spinal trigeminal nucleusipsiSp5nc1
Vestibular nucleiipsiVnc1
Inferior oliveipsiIO1
DiencephalonipsiDEC-0.5
A8 dopamine cells retrorubral group lateral partipsiRRFL2
A8 dopamine cells retrorubral group medial partipsiRRFm2
Central medial thalamic nucleusipsiCM3
Parafascicular thalamic nucleusipsiPF1
Ventral anterior-lateral complex of the thalamusipsiVAL2
Caudodorsal part of ventral anterior-lateral complex of the thalamusipsiCDVAL2
Ventrolateral thalamic nucleusipsiVL2.5
Ventrolateral thalamic nucleus lateral mediodorsal partipsiVLLMD1
Ventrolateral thalamic nucleus rostromedial partipsiVLRM1
Ventrolateral thalamic nucleus ventralmost aspectipsiVLvem-0.5
Ventromedial thalamic nucleusipsiVM1
Ventral thalamusipsiVNT-0.5
Reticular thalamic nucleusipsiRt-0.5
Zona incertaipsiZI2
Anterior pretectal nucleusipsiAPT2
Internal capsuleipsiic-0.5
Medial internal capsuleipsimic-0.5
Interpeduncular nucleusipsiIP0
Cervical segmentsipsiCSeg-0.5
Cervical segment 1ipsiCS1-0.5
Cervical segment 2ipsiCS2-0.5
Cervical segment 3ipsiCS3-0.5
Cervical segment 4ipsiCS4-0.5
Cervical segment 5ipsiCS5-0.5
Cervical segment 6ipsiCS6-0.5
Cervical segment 7ipsiCS7-0.5
Cervical segment 8ipsiCS8-0.5
Lumbosacral spinal cordipsiLSSC-0.5

Input from

NameSideAbbr.WeightDetails
Ventral tegmental area A10contraVTA2
Caudal part of the lateral reticular nucleuscontraCaLRt-0.5
Lateral reticular nucleus rostral partcontraLRtr-0.5
Inferior olivecontraIO-0.5
Reticular thalamic nucleuscontraRt0
Zona incertacontraZI2
Dorsal geniculate nucleus lateral partcontraDLGl0
Ventral lateral geniculate nucleus medial partcontraVLGM2
Medial geniculate nucleuscontraMG0
Cervical segment 6contraCS60.5
Cervical segment 7contraCS70.5
Cervical segment 8contraCS80.5
Lateral spinal nucleus L1contraLSpL10
Dorsal horn L1contraDHL11
Superficial dorsal horn L1contraSDHL10
Ventral horn L1contraVHL10.5
Intermediate zone L1contraizVHL10.5
Lumbar segment 6contraL60.5
Sacral segment 1contraSa10.5
Sacral segment 2contraSa20.5
Ventral tegmental area A10ipsiVTA1
Peripeduncular nucleus dorsal partipsiPPdo3
Peripeduncular nucleus ventral partipsiPPv3
Pedunculopontine tegmental nucleusipsiPPTg1
Edinger Westphal nucleusipsiEW1.5
Dorsal paraflocculusipsiDPFl-0.5
Paraflocculus ventral partipsiPFlv-0.5
Zone D of ansiform lobule crus 2ipsiCrus2zD-0.5
Zone D of the paramedian lobuleipsiPMzD-0.5
Zone D of simple lobuleipsiSimzD-0.5
Cerebellar lobule 3b zone C1ipsiCERL3bC1-0.5
Cerebellar lobule 4 zone C1ipsiCERL4C1-0.5
Pontine nucleiipsiPn2
Pontine nuclei dorsolateral partipsiBPNdL3
Pontine nuclei lateral partipsiBPNL3
Pontine nucleus medial partipsiBPNm1
Pontine nucleus ventral partipsiBPNv3
Prepositus nucleusipsiPr2
Pontine reticular nucleus central partipsiNRTPc3
Pontine reticular nucleus pericentral partipsiNRTPp3
Lateral reticular nucleusipsiLRt-0.5
Caudal part of the lateral reticular nucleusipsiCaLRt-0.5
Lateral reticular nucleus rostral partipsiLRtr-0.5
Spinal trigeminal nucleus interpolar partipsiSp5I2
Vestibular nucleiipsiVnc1
Inferior vestibular nucleusipsiIVN2
External cuneate nucleusipsiECu2
Intercalated nucleus of the medullaipsiIn2
Nucleus of RolleripsiRo2
Nucleus XipsiX2
Inferior oliveipsiIO2
Lateral hypothalamic areaipsiLH1
Lateral hypothalamic area perifornical partipsiPFx1
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM1
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM1
Dorsal spinocerebellar tractipsidsc-2
Ventral spinocerebellar tractipsivsc-2
Bed nucleus of the stria terminalisipsiBST-0.5
Motoric regionsipsiM2.5
Primary somatosensory cortex forelimb regionipsiS1FL2.5
Primary somatosensory cortex hindlimb regionipsiS1HL2.5
Dorsal root ganglion C2ipsiDRGC20
Cervical segment 6ipsiCS60.5
Cervical segment 7ipsiCS70.5
Cervical segment 8ipsiCS80.5
Lateral spinal nucleus L1ipsiLSpL10
Dorsal horn L1ipsiDHL12
Superficial dorsal horn L1ipsiSDHL10
Ventral horn L1ipsiVHL11
Intermediate zone L1ipsiizVHL11
Lumbar segment 6ipsiL60.5
Sacral segment 1ipsiSa10.5
Sacral segment 2ipsiSa20.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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