Department of Anatomy University of Rostock

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Rat connectome

Commissural systems right

Subregions	Side
Magnocellular nucleus of the posterior commissure	right
Nucleus of the posterior commissure	right
Optic chiasma	right
Posterior commissure	right
Precommissural fornix	right
Precommissural nucleus	right
Subcommissural nucleus	right
Intracommissural nucleus of the posterior commissure	right
Precommissural bundle	right
Anterior commissural nucleus	right
Premammillary commissure	right
Commissural fibers	right
Anterior commissure	right

Name	Side	Abbr.	Weight
Somatomotoric regions	contra	SMR	-2
Primary visual cortex	contra	V1	-2
Secondary visual cortex	contra	V2	-2
Supramammillar nucleus	ipsi	SuM	-0.5
Dorsal region of the rostrocaudal intermediate caudate putamen	ipsi	CPurdcim	-2
Cerebral cortex	ipsi	CEC	0.5
Hippocampus	ipsi	HIPP	-0.5
Somatomotoric regions	ipsi	SMR	-2
Lateral agranular prefrontal cortex	ipsi	AGl	-2
Sensory regions layers	ipsi	SRL	-0.5
Somatosensory cortex layer 2	ipsi	SRL2	-0.5
Somatosensory cortex layer 3	ipsi	SRL3	-0.5
Somatosensory cortex layer 4	ipsi	SRL4	-0.5
Visual regions	ipsi	VR	-2
Primary visual cortex	ipsi	V1	-2
Primary visual cortex lateral part	ipsi	V1La	-2
Primary visual cortex layer 3 4 border	ipsi	V1L34	-2
Primary visual cortex layer 4	ipsi	V1L4	-2
Primary visual cortex layer 5 a	ipsi	V1L5a	-2
Primary visual cortex layer 5 b	ipsi	V1L5b	-2
Secondary visual cortex	ipsi	V2	-2
Primary visual cortex monocular area	ipsi	V1M	-2
Border between medial and lateral septum	ipsi	SERbML	-0.5

Name	Side	Abbr.	Weight
Claustrum	contra	Cl	-2
Fimbria lateral to the hippocampus	contra	fimblH	-2
Caudal portion of the lateral ventricle	contra	CaLV	-2
Parafascicular thalamic nucleus	ipsi	PF	-0.5
Claustrum	ipsi	Cl	-2
Field CA1 of hippocampus temporal pole	ipsi	CA1tp	-2
Fimbria lateral to the hippocampus	ipsi	fimblH	-2
Entorhinal cortex layer 4	ipsi	EntL4	-0.5
Entorhinal cortex layer 6	ipsi	EntL6	-0.5
Anterior cingulate cortex anterior part layer 5	ipsi	ACCaL5	-0.5
Anterior cingulate cortex layer 6	ipsi	ACCL6	-0.5
Cingulate cortex area 1	ipsi	Cg1	-0.5
Cingulate cortex area 2	ipsi	Cg2	-0.5
Caudal cingulate cortex	ipsi	CCg	-2
Rostral part of the cingulate cortex	ipsi	RCg	-2
Frontal cortex area 2	ipsi	Fr2	-0.5
Temporal association area 2 dorsal part	ipsi	Te2D	-2
Rostral forelimb motor area	ipsi	RFMA	0.5
Whiskers motor cortex layer 5	ipsi	WMCxL5	-2
Whiskers motor cortex layer 6	ipsi	WMCxL6	-2
Medial prefrontal cortex	ipsi	mPFC	0.5
Primary somatosensory cortex barrel field bottom of layer 3	ipsi	S1BbF3	-2
Primary somatosensory cortex barrel field layer 5	ipsi	S1BF5	-2
Primary somatosensory cortex forelimb region	ipsi	S1FL	0.5
Primary somatosensory cortex hindlimb region	ipsi	S1HL	0.5
Primary visual cortex lateral part	ipsi	V1La	-2
Secondary visual cortex medial area	ipsi	V2M	-2
Secondary visual cortex lateral area	ipsi	V2L	-2
Rostral two-thirds of secondary visual cortex	ipsi	V2Rtt	-2
Primary visual cortex monocular area	ipsi	V1M	-2
Medial geniculate nucleus dorsal part	ipsi	MGD	-2
Caudal portion of the lateral ventricle	ipsi	CaLV	-2
Around lateral ventricle	ipsi	aLV	0