University of Rostock

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Rat connectome



Vitreous humor of eye right


Abbreviation
OrgVHEye
Color       
Superior regionsEye

SynonymsAbbr.Language
Vitreous humor of eyeOrgVHEyeEng
Vitreous body Eng
Vitreous body of eye Eng

Output to

NameSideAbbr.WeightDetails
Superior colliculuscontraSC4
Optic nerve layer of the superior colliculuscontraOp3
Lateral hypothalamic area [Lateral zone mammillary level]contraLHLZM1
Subparaventricular zonecontraSuPZ1
Suprachiasmatic nucleuscontraSCh4
Anterior hypothalamic area [Regio rostralis]contraAHARR1
Posterior groupcontraPTG-0.5
Zona incertacontraZI-0.5
Pretectal regioncontraPRT4
RetinacontraRET-0.5
Central zone of the ganglion cell layer of the retinacontraRETgcLcz3
Intermediate zone of ganglion cell layer of the retinacontraRETgcLiz2
Periphery zone of ganglion cell layer of the retinacontraRETgcLpz1.5
Piriform cortexcontraPir-0.5
Geniculate bodycontraGB4
Lateral geniculate complexcontraLG4
Superior colliculusipsiSC3
Superior colliculus deep layersipsiSCd3
Superficial layers of the superior colliculus mediolateral partipsiSCsmL1
Trigeminal nucleusipsi5-10
Principal sensory trigeminal nucleusipsiPr5-10
Spinal trigeminal nucleusipsiSp5nc-10
Trigeminal ganglion medial partipsi5GnM-0.5
Pineal glandipsiPi-10
Central zone of the ganglion cell layer of the retinaipsiRETgcLcz3
Intermediate zone of ganglion cell layer of the retinaipsiRETgcLiz2
Periphery zone of ganglion cell layer of the retinaipsiRETgcLpz1.5
Visual regionsipsiVR0
Maxillary nerveipsi5V2-2

Input from

NameSideAbbr.WeightDetails
Nucleus of DarkschewitschcontraDk-0.5
Optic nerve layer of the superior colliculuscontraOp3
Edinger Westphal nucleuscontraEW3
A5 noradrenaline cellscontraA5-0.5
Olivary pretectal nucleuscontraOPT-0.5
Superior salivatory nucleuscontraSuS-0.5
Suprachiasmatic nucleuscontraSCh-0.5
RetinacontraRET-0.5
Retina ganglion cell layercontraRETgcL-0.5
Nucleus of DarkschewitschipsiDk3
Periaqueductal grayipsiPAG2
Laterodorsal tegmental nucleusipsiLDTg3
Ventral tegmental nucleusipsiVTg1
Edinger Westphal nucleusipsiEW3
A5 noradrenaline cellsipsiA52
Locus coeruleusipsiLC3
Magnocellular reticular nucleusipsiNRMC2
Principal sensory trigeminal nucleusipsiPr50.5
Spinal trigeminal nucleusipsiSp5nc0.5
Trigeminal ganglionipsi5Gn3
Superior vestibular nucleusipsiSuVe3
Medial vestibular nucleusipsiMVe3
Raphe obscurus nucleusipsiROb2
Raphe pallidus nucleusipsiRPa2
Olivary pretectal nucleusipsiOPT3
Paragigantocellular reticular nucleusipsiPGi2
Superior salivatory nucleusipsiSuS2
Medial preoptic areaipsiMPA3
Tuberomammillary nucleusipsiTuM3
Dorsomedial hypothalamic nucleusipsiDMHy2
Lateral hypothalamic areaipsiLH3
Arcuate nucleusipsiArc3
Paraventricular hypothalamic nucleusipsiPa3
Suprachiasmatic nucleusipsiSCh3
Nucleus properipsiSOnP3
Supraoptic nucleus perinuclear zoneipsiSOpnz3
Subfornical organipsiSFO3
Nucleus of the optic tractipsiOT1
HabenulaipsiHAB2
Lateral terminal nucleus of the accessory optic tractipsiLTeN3
Nucleus of the posterior commissureipsiPCom2
Intergeniculate leafipsiIGL3
Intermediolateral cell column T1ipsiIMLT13
Intermediolateral cell column T2ipsiIMLT23
Intermediolateral cell column T3ipsiIMLT33
Intermediolateral cell column T4ipsiIMLT43
Intermediolateral cell column T5ipsiIMLT53
Intermediolateral cell column T6ipsiIMLT63
Intermediolateral cell column T7ipsiIMLT73
Intermediolateral cell column T8ipsiIMLT83
Intermediolateral cell column T9ipsiIMLT93
Intermediolateral cell column T10ipsiIMLT103
Intermediolateral cell column T11ipsiIMLT113
Intermediolateral cell column T12ipsiIMLT123
Intermediolateral cell column T13ipsiIMLT133
Superior cervical ganglionipsiAutoSCeG3
Ciliary ganglionipsiAutoCiG1
Pterygopalatine ganglionipsiAutoPpG2

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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