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Rat connectome



Subparaventricular zone left


Abbreviation
SuPZ
Color       
Superior regionsMedial zone

SynonymsAbbr.Language
Subparaventricular hypothalamic zone Eng
 SPVZEng
Subparaventricular region Eng
Subparaventricular zoneSBPVEng
Subparaventricular zoneSubPVEng
Subparaventricular zone hypothalamus Eng
Subparaventricular zoneSuPZEng

SubregionsSide
Subparaventricular zone ventral partleft
Subparaventricular zone ventrocaudal aspectleft
Subparaventricular zone at ventral border of paraventricular hypothalamic nucleusleft
Rostral subparaventricular zoneleft
Caudal subparaventricular zoneleft
Subparaventricular zone between suprachiasmatic nucleus and paraventricular hypothalamic nucleusleft
Extension of the subparaventricular zoneleft
Subparaventricular area medial aspectleft
Subparaventricular lateral aspectleft
Subparaventricular zone ventrolateral partleft
Subparaventricular zone ventromedial partleft
Subparaventricular zone dorsomedial partleft
Subparaventricular zone dorsolateral partleft
Subparaventricular zone dorsal partleft

Output to

NameSideAbbr.WeightDetails
Central grayipsiCG-0.5
Ventral tegmental area A10ipsiVTA2
Edinger Westphal nucleusipsiEW-0.5
Barringtons nucleusipsiBar1
Locus coeruleusipsiLC1
Prelocus coeruleus nucleusipsiPLC-0.5
Lateral parabrachial nucleusipsiLPB-0.5
Dorsal raphe nucleusipsiDR-0.5
Olivary pretectal nucleusipsiOPT-0.5
Median eminenceipsiME-0.5
Internal zone of the median eminenceipsiiZME4
Median eminence external layeripsiMEeL4
Nucleus of the horizontal limb of the diagonal bandipsiHDB-0.5
Medial septal nucleusipsiMS3
Substantia innominataipsiSI-0.5
Medial preoptic areaipsiMPA-0.5
Medial preoptic nucleusipsiMPO1.5
Median preoptic nucleusipsiMnPO3
Ventrolateral preoptic nucleusipsiVLPO2
Ventromedial preoptic nucleusipsiVMPO3
Ventral tuberomammillary nucleusipsiVTM-0.5
Dorsomedial hypothalamic nucleusipsiDMHy1
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC0
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR1
Lateral hypothalamic areaipsiLH-0.5
Lateral hypothalamic area juxtadorsomedial regionipsiJDM0.5
Lateral hypothalamic area motor related juxtaventromedial region dorsal zoneipsiLHAjvd2
Lateral hypothalamic area motor related juxtaventromedial region ventral zoneipsiLHAjvv1
Lateral hypothalamic area [Lateral zone tuberal level]ipsiLHtu0.5
Medial division of the hypothalamusipsiMdH0.5
Anterior hypothalamic areaipsiAHA-0.5
Anterior hypothalamic area caudal partipsiAHAca-0.5
Anteroventral periventricular nucleus [Anterior hypothalamic area]ipsiAVPe3
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM3
Parastriatal nucleusipsiPS1
Subparaventricular zoneipsiSuPZ3
Ventromedial hypothalamic nucleusipsiVMH3
Anteroventral periventricular nucleus 2ipsiAVPV20.5
Arcuate nucleusipsiArc2
Paraventricular hypothalamic nucleusipsiPa-0.5
Periventricular hypothalamic nucleus rostral partipsiPeR-0.5
Suprachiasmatic nucleusipsiSCh3
Ventral supraoptic commissureipsivsox-0.5
Medial mammillary nucleusipsiMMn-0.5
Premammillary nucleusipsiPMAN-0.5
Supramammillar nucleusipsiSuM-0.5
Retrochiasmatic area lateral partipsiRChL-0.5
Paratenial thalamic nucleusipsiPT-0.5
Paraventricular thalamic nucleusipsiPV3
Reuniens thalamic nucleusipsiRe1
Lateral habenular nucleusipsiLHb-0.5
RetinaipsiRET1
Bed nucleus of the stria terminalisipsiBST3
Central amygdaloid nucleusipsiCe1
Medial amygdaloid nucleusipsiMe2
Ventral pallidumipsiVP-0.5
Intergeniculate leafipsiIGL-0.5
Lateral septal nucleusipsiLS3
Lateral septal nucleus ventral partipsiLSV1
Intermediolateral cell column T1ipsiIMLT11
Intermediolateral cell column T2ipsiIMLT21
Intermediolateral cell column T3ipsiIMLT31
Intermediolateral cell column T4ipsiIMLT41
Lateral parabrachial nucleuscontraLPB-0.5
Median eminence external layercontraMEeL3
Medial preoptic areacontraMPA-0.5
Medial preoptic nucleuscontraMPO0.5
Ventrolateral preoptic nucleuscontraVLPO0.5
Ventromedial preoptic nucleuscontraVMPO-0.5
Lateral hypothalamic areacontraLH-0.5
Anterior hypothalamic areacontraAHA-0.5
Anteroventral periventricular nucleus 2contraAVPV20.5
Ventral supraoptic commissurecontravsox-0.5
Medial mammillary nucleuscontraMMn-0.5
Premammillary nucleuscontraPMAN-0.5
Supramammillar nucleuscontraSuM-0.5
RetinacontraRET2
Intraperitoneal cavityipsiOrgiPTC-0.5

Input from

NameSideAbbr.WeightDetails
Edinger Westphal nucleusipsiEW1
Lateral parabrachial nucleus central lateral partipsiLPBCL3
Parabrachial nucleus dorsolateral partipsiPBDL3
C1 adrenaline cellsipsiC13
Nucleus of the solitary tract commissural partipsiSolC1
Nucleus of the solitary tract medial part caudal zoneipsiSolMc3
Dorsal raphe nucleusipsiDR-0.5
Dorsal raphe nucleus rostral partipsiDRr2
Median raphe nucleusipsiMnR-0.5
Ventral lateral medulla oblongataipsiMVL0
A1 noradrenergic cellsipsiA13
A2 noradrenergic cellsipsiA23
Medullary reticular formation betweeen A1 and A2ipsiMRFbA1A21
Preoptic regionipsiPREO-0.5
Median preoptic nucleusipsiMnPO3
Vascular organ of the lamina terminalisipsiVOLT3
HypothalamusipsiHYPO3
Dorsomedial hypothalamic nucleusipsiDMHy0
Caudal part of the dorsomedial hypothalamic nucleusipsiDMHyC1
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC2
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR2
Lateral hypothalamic area anterior part [Preoptic anterior region]ipsiLHAapar0
Lateral hypothalamic area posterior part [Preoptic anterior region]ipsiLHApPAR0
Lateral hypothalamic area premammillary subfornical region [Preoptic anterior region]ipsiLHAsfp0
Lateral hypothalamic area caudal partipsiLHc2
Lateral hypothalamic area juxtadorsomedial regionipsiJDM2
Lateral hypothalamic area motor related juxtaventromedial regionipsiLHAjvm1.5
Lateral hypothalamic area motor related juxtaventromedial region dorsal zoneipsiLHAjvd0.5
Lateral hypothalamic area motor related juxtaventromedial region ventral zoneipsiLHAjvv1
Lateral hypothalamic area subfornical region anterior zoneipsiLHAsfa0
Lateral hypothalamic area rostral partipsiLHro3
Tuberal division of the lateral hypothalamic areaipsiLHTC3
Tuberal nucleusipsiTU1
Anterior hypothalamic area central partipsiAHAC-2
Anterior hypothalamic nucleusipsiAHn3
Anterior part of the anterior hypothalamic nucleusipsiAHna3
Subparaventricular zoneipsiSuPZ3
Ventromedial hypothalamic nucleusipsiVMH4
Ventromedial hypothalamic nucleus anterior partipsiVMHA3
Ventromedial hypothalamic nucleus central partipsiVMHC1
Ventromedial hypothalamic nucleus dorsomedial partipsiVMHDM3
Ventromedial hypothalamic nucleus ventrolateral partipsiVMHVL3
Suprachiasmatic nucleusipsiSCh3
Suprachiasmatic nucleus central divisionipsiSChc1
Suprachiasmatic nucleus dorsomedial partipsiSCnDM1
Suprachiasmatic nucleus external divisionipsiSChe1
Suprachiasmatic nucleus ventrolateral partipsiSCnVL2
Suprachiasmatic nucleus medioventral partipsiSChmv2
Suprachiasmatic nucleus medial shell regionipsiSChSM2.5
Suprachiasmatic nucleus core regionipsiSChCo3
Perifornical nucleusipsiPeF3
Retrochiasmatic area lateral partipsiRChL-2
Paraventricular thalamic nucleus anterior part ventral portionipsiPVAV-0.5
Subfornical organipsiSFO0
Most rostral part of the subfornical organipsiSFOmR3
Caudal subfornical organipsiCSFO1
RetinaipsiRET2
Anterior basolateral nucleusipsiBLA0
Posterior basolateral nucleusipsiBLP0
Anterior basomedial nucleusipsiBMA1
Posterior basomedial nucleusipsiBMP1
Lateral amygdaloid nucleusipsiLA0
Bed nucleus of the stria terminalisipsiBST3
Bed nucleus of the stria terminalis dorsal nucleusipsiBSTd3
Central amygdaloid nucleus lateral divisionipsiCeL0
Central amygdaloid nucleus lateral division capsular partipsiCeC0
Central amygdaloid nucleus medial divisionipsiCeM0
Amygdalopiriform transition areaipsiAPir0
Anterior amygdaloid areaipsiAA0
Anterior cortical amygdaloid nucleusipsiACo0
Posterior amygdaloid nucleusipsiCOAp2
Posterolateral cortical nucleusipsiPLCo0
Medial amygdaloid nucleus anterodorsal partipsiMeAD2
Medial amygdaloid nucleus posterodorsal partipsiMePD0
Medial amygdaloid nucleus posteroventral partipsiMePV3
Posteromedial cortical nucleusipsiPMCo0
Hippocampal septalipsiHIPPs2
SubiculumipsiS3
Subiculum ventral partipsiSv3
Subiculum ventral part caudal subdivisionipsiSvc3
Ventral subiculum rostromedial partipsiSvrm3
Subiculum ventral part temporal aspectipsiSvTA-0.5
Postpiriform transition areaipsiTR0
Intergeniculate leafipsiIGL3
Lateral septal nucleus rostral partipsiLSr-0.5
Lateral septal nucleus ventral partipsiLSV3
Lateral septal nucleus mediolateral partipsiLSML4
Ventrolateral septal regionipsiVLSER-0.5
Anteroventral tip of the ventricular regionipsi3Vavt3
Tuberal nucleuscontraTU0.5
Ventromedial hypothalamic nucleuscontraVMH-0.5
Ventromedial hypothalamic nucleus anterior partcontraVMHA1.5
Ventromedial hypothalamic nucleus central partcontraVMHC0.5
Ventromedial hypothalamic nucleus dorsomedial partcontraVMHDM1
Ventromedial hypothalamic nucleus ventrolateral partcontraVMHVL1.5
Suprachiasmatic nucleus dorsomedial partcontraSCnDM-0.5
Suprachiasmatic nucleus ventrolateral partcontraSCnVL-0.5
Suprachiasmatic nucleus medioventral partcontraSChmv-0.5
Bed nucleus of the stria terminalis fusiform partcontraFu1
Intergeniculate leafcontraIGL1
Vitreous humor of eyecontraOrgVHEye1

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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