University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Zona incerta caudal part left


Abbreviation
ZIC
Color       
Superior regionsZona incerta

SynonymsAbbr.Language
Zona incerta caudal partZIC 
Caudal sector zona incertaZIcEng

SubregionsSide
Zona incerta caudal poleleft
Zona incerta caudal two-thirdsleft

Output to

NameSideAbbr.WeightDetails
Nucleus of DarkschewitschipsiDk0
Oculomotor nucleusipsi33
External cortex of the inferior colliculusipsiECIC0
Superior colliculusipsiSC2
Superior colliculus superficial layersipsiSCs-0.5
Substantia nigra A9ipsiSN-0.5
Pedunculopontine tegmental nucleusipsiPPTg-0.5
Edinger Westphal nucleusipsiEW0
Medulla oblongataipsiMeOb1
Ventromedial hypothalamic nucleusipsiVMH-1
Paraventricular hypothalamic nucleusipsiPa3
Retrochiasmatic areaipsiRCh-1
Centrolateral thalamic nucleusipsiCL2
Posterior thalamic nuclear group caudal partipsiPoca-0.5
Laterodorsal thalamic nucleusipsiLD1
Reticular thalamic nucleus caudal partipsiRtc1
Zona incerta dorsal partipsiZID3
Zona incerta rostral partipsiZIR3
Zona incerta ventral partipsiZIV3
Medial globus pallidusipsiMGP-0.5
Caudate putamenipsiCPu1
Frontal association cortexipsiFrA0
Temporal association area 3ipsiTe30
Spinal cord layers C1ipsiSCLC11
Spinal cord layers C2ipsiSCLC21
Spinal cord layers C3ipsiSCLC31
Spinal cord layers C4ipsiSCLC41
Spinal cord layers C5ipsiSCLC51
Spinal cord layers C6ipsiSCLC61
Spinal cord layers C7ipsiSCLC71
Spinal cord layers C8ipsiSCLC81
Thoracal segment 1ipsiT11
Thoracal segment 2ipsiT21
Thoracal segment 3ipsiT31
Thoracal segment 4ipsiT41
Thoracal segment 5ipsiT51
Thoracal segment 6ipsiT61
Thoracal segment 7ipsiT71
Thoracal segment 8ipsiT81
Thoracal segment 9ipsiT91
Thoracal segment 10ipsiT101
Thoracal segment 11ipsiT111
Thoracal segment 12ipsiT121
Thoracal segment 13ipsiT131
Superior colliculuscontraSC1
Paraventricular hypothalamic nucleuscontraPa0
Supraoptic decussationcontrasox-0.5
Rhomboid thalamic nucleuscontraRh-0.5
Reuniens thalamic nucleuscontraRe-0.5
Zona incertacontraZI3
Zona incerta caudal partcontraZIC0.5
Zona incerta dorsal partcontraZID3
Zona incerta rostral partcontraZIR3
Zona incerta ventral partcontraZIV3

Input from

NameSideAbbr.WeightDetails
Interstitial nucleus of medial longitudinal fasciculusipsiIMLF1
Rostral interstitial nucleus of medial longitudinal fasciculusipsiRI1
Periaqueductal grayipsiPAG1
External cortex of the inferior colliculusipsiECIC0
Superior colliculusipsiSC0.5
Substantia nigra compact partipsiSNC1
Substantia nigra compact part ventral tieripsiSNCV2
Substantia nigra reticular partipsiSNR1
Peripeduncular areaipsiPPA1
Pedunculopontine tegmental nucleusipsiPPTg1
Interposed cerebellar nucleiipsiICN1
Lateral cerebellar nucleusipsiCERL1
Deep mesencephalic nucleusipsiDpMe1
Pontine reticular nucleus oral partipsiPnO1
Parabrachial nucleus external divisonipsiPBeD-0.5
Principal sensory trigeminal nucleusipsiPr53
Spinal trigeminal nucleusipsiSp5nc1
Spinal trigeminal nucleus interpolar partipsiSp5I3
Cuneate nucleusipsiCu1
Gracile nucleus principal partipsiGr1
Substantia innominataipsiSI3
Anterior hypothalamic nucleusipsiAHn1
Ventromedial hypothalamic nucleusipsiVMH1
Dorsal part of the lateral geniculate complexipsiLGd0
Posterior thalamic nuclear group central portionipsiPoCe-0.5
Posterior groupipsiPTG3
Ventral thalamusipsiVNT3
Zona incerta dorsal partipsiZID3
Zona incerta rostral partipsiZIR3
Zona incerta ventral partipsiZIV3
RetinaipsiRET3
Central amygdaloid nucleusipsiCe1
Medial amygdaloid nucleusipsiMe1
Field CA1 of hippocampus ventral poleipsiCA1vp0
Cingulate cortexipsiCg3
Infralimbic cortexipsiIL1
NeocortexipsiNEOCX0.5
Temporal association area 3ipsiTe30
Sensory regionsipsiSR3
Primary visual cortexipsiV13
Magnocellular nucleus of the posterior commissureipsiMCPC1
Nucleus of the posterior commissureipsiPCom1
Precommissural nucleusipsiPrC1
Cervical segment 3ipsiCS31
Cervical segment 4ipsiCS41
Lumbar segment 2ipsiL20.5
Lumbar segment 3ipsiL30.5
Interstitial nucleus of medial longitudinal fasciculuscontraIMLF0.5
Rostral interstitial nucleus of medial longitudinal fasciculuscontraRI0.5
Periaqueductal graycontraPAG0.5
Deep mesencephalic nucleuscontraDpMe0.5
Zona incerta caudal partcontraZIC0.5
Zona incerta dorsal partcontraZID3
Zona incerta ventral partcontraZIV0.5
Magnocellular nucleus of the posterior commissurecontraMCPC0.5
Nucleus of the posterior commissurecontraPCom0.5
Precommissural nucleuscontraPrC1.5
Intergeniculate leaf rostrocaudal partcontraIGLR2

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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