University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Lateral accumbens shell left


Abbreviation
AcbShl
Color       
Superior regionsAccumbens nucleus shell

SynonymsAbbr.Language
 LAcbSh 
Accumbens sheall lateral part Eng
Lateral accumbens shellAcbShlEng

Output to

NameSideAbbr.WeightDetails
Ventrolateral periaqueductal grayipsiVLPAG3
Substantia nigra A9ipsiSN2
Substantia nigra compact partipsiSNC3
Substantia nigra reticular partipsiSNR1
Ventral tegmental area A10ipsiVTA2
Ventral tegmental area A10 caudal partipsiVTAcp1
Ventral tegmental area rostral partipsiVTAR1
Middle part of the retrorubral fieldipsiRRmi2
A8 dopamine cells retrorubral group lateral partipsiRRFL3
A8 dopamine cells retrorubral group medial partipsiRRFm1
Ventral pallidumipsiVP4
Ventral pallidum ventrolateral partipsiVPvl2

Input from

NameSideAbbr.WeightDetails
Periaqueductal grayipsiPAG1
Peduncularpontine nucleusipsiPPN3
Substantia nigra compact partipsiSNC1
Ventral tegmental area A10ipsiVTA2
Ventral tegmental area A10 lateral partipsiVTAL-0.5
Interfascicular nucleusipsiIF1
Ventral tegmental tailipsiVTTa0
Parabrachial pigmented nucleusipsiPBP4
Paranigral nucleusipsiPN1
Caudal linear nucleus of the rapheipsiCLi1
Retrorubral nucleusipsiRR2
Laterodorsal tegmental nucleusipsiLDTg1
Pedunculopontine tegmental nucleusipsiPPTg1
Locus coeruleusipsiLC1
Lateral parabrachial nucleusipsiLPB1
Dorsal raphe nucleusipsiDR2
Rostral linear nucleus of the rapheipsiRLi1
Median raphe nucleusipsiMnR0.5
Paramedian raphe nucleusipsiPMnR0.5
Pontine raphe nucleusipsiPnR0.5
Raphe magnus nucleusipsiRMg1
Region of tuber cinereumipsiTCReg1
Lateral hypothalamic area [Region of tuber cinereum]ipsiLHTUC2
Lateral hypothalamic areaipsiLH2
Posterior hypothalamic areaipsiPHA1
Paraventricular hypothalamic nucleus posterior part [Periventricular zone anterior region]ipsiPaPo3
A8 dopamine cells retrorubral groupipsiRRF-0.5
Central medial thalamic nucleusipsiCM2.5
Paracentral thalamic nucleusipsiPC3
Parafascicular thalamic nucleus lateral partipsiPFL3
Parafascicular thalamic nucleus medial partipsiPFM4
Parafascicular thalamic nucleus ventral partipsiPFV3
Retroparafascicular nucleusipsiRPF1
Rhomboid thalamic nucleusipsiRh2
Mediodorsal thalamic nucleusipsiMD2
Intermediodorsal thalamic nucleusipsiIMD3
Midline group of the dorsal thalamusipsiMTN-0.5
Paratenial thalamic nucleusipsiPT2
Paraventricular thalamic nucleusipsiPV2
Paraventricular thalamic nucleus anterior partipsiPVA2
Paraventricular thalamic nucleus posterior partipsiPVP2.5
Reuniens thalamic nucleusipsiRe2
Medial segment of the mediolateral thalamic nucleusipsiMeLTmes-0.5
Basal nucleusipsiBnc-0.5
Accessory basal nucleusipsiAB1
Accessory basal nucleus rostral partipsiABr1
Superficial accessory basal nucleusipsiABs1
Basal nucleus parvicellular partipsiBpc-1
Basomedial nucleus magnocellular division rostral partipsiABmcrp-0.5
Basomedial nucleus magnocellular division rostral halfipsiABmcrph3
Basomedial nucleus parvicellular division rostral halfipsiABpcr3
Posterolateral cortical nucleusipsiPLCo2
Nucleus of the lateral olfactory tract layer 2ipsiLOTL22
Nucleus of the lateral olfactory tract layer 3ipsiLOTL31
Subthalamic nucleusipsiSTh1
Subthalamic nucleus medial one-thirdipsiSThMot1
Field CA1 of hippocampusipsiCA11
Pyramidal cell layer of the hippocampusipsiPy2
Entorhinal cortexipsiEnt2
Lateral entorhinal cortexipsiLEnt-0.5
Piriform cortexipsiPir2
Prelimbic cortex ventral partipsiPrLv-1
Infralimbic cortexipsiIL3
Ventral limbic areaipsiVLA1.5
Agranular insular cortexipsiAI3
Agranular insular cortex posterior partipsiAIP1.5
Agranular insular cortex ventral partipsiAIV-0.5
Perirhinal cortexipsiA353
Dorsal peduncular cortexipsiDP3
Lateral prefrontal cortexipsilPFC-0.5
Orbital cortexipsiOrC2
Lateral orbital cortexipsiLO2
Ventrolateral orbital areaipsiVLO1
Septal regionipsiSER0
Pedunculopontine tegmental nucleuscontraPPTg1
Lateral parabrachial nucleuscontraLPB1
Dorsal raphe nucleuscontraDR2
Lateral hypothalamic area [Region of tuber cinereum]contraLHTUC2
Lateral hypothalamic areacontraLH2
Accessory basal nucleuscontraAB1
Superficial accessory basal nucleuscontraABs1
Nucleus of the lateral olfactory tract layer 3contraLOTL31

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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